RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 ALDH1L1O75891 902 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 ATP1A3P13637 1013 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 IRX3P78415 501 aaPredicted RBP6.13□□□□□ -1.43
KDM3B-209ENST00000542866 GRIPAP1Q4V328 841 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 NAA16Q6N069 864 aaPredicted RBP6.13□□□□□ -1.43
KDM3B-209ENST00000542866 KSR2Q6VAB6 950 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 C10orf67Q8IYJ2 551 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 ZSWIM4Q9H7M6 989 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 BABAM1Q9NWV8 329 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 FEZ2Q9UHY8 353 aaPredicted RBP6.13□□□□□ -1.43
KDM3B-209ENST00000542866 PRAMEF22A3QJZ6 481 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 TULP2O00295 520 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 CCP110O43303 1012 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 PFKFB2O60825 505 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 ATP6V1AP38606 617 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 UBASH3AP57075 661 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 SMC1AQ14683 1233 aaKnown RBP6.13□□□□□ -1.43
KDM3B-209ENST00000542866 RAB11FIP4Q86YS3 637 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 CERS3Q8IU89 383 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 FMR1NBQ8N0W7 255 aaPredicted RBP6.13□□□□□ -1.43
KDM3B-209ENST00000542866 CCDC191Q8NCU4 936 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 CLIC4Q9Y696 253 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 NRKQ7Z2Y5 1582 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 PATL2C9JE40 543 aaKnown RBP6.13□□□□□ -1.43
KDM3B-209ENST00000542866 CTDNEP1O95476 244 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 LMAN1P49257 510 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 GNG11P61952 73 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 TSGA10IPQ3SY00 556 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 ADALQ6DHV7 355 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 SYNE3Q6ZMZ3 975 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 BARGINQ6ZT62 677 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 DHX32Q7L7V1 743 aaKnown RBP6.13□□□□□ -1.43
KDM3B-209ENST00000542866 SMARCC2Q8TAQ2 1214 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 TSPYL1Q9H0U9 437 aa6.13□□□□□ -1.43
KDM3B-209ENST00000542866 MED23Q9ULK4 1368 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 PEAK1Q9H792 1746 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 ZRANB2O95218 330 aaKnown RBP eCLIP6.12□□□□□ -1.43
KDM3B-209ENST00000542866 CASQ1P31415 396 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 ZSCAN26Q16670 478 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 MCMDC2Q4G0Z9 681 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 STOX1Q6ZVD7 989 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 LLPHQ9BRT6 129 aaKnown RBP6.12□□□□□ -1.43
KDM3B-209ENST00000542866 PRDM16Q9HAZ2 1276 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 KCND1Q9NSA2 647 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 COL5A2P05997 1499 aaPredicted RBP6.12□□□□□ -1.43
KDM3B-209ENST00000542866 EFCAB8A8MWE9 144 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 TADA3O75528 432 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 SASH3O75995 380 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 ZNF202O95125 648 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 MYCNP04198 464 aaPredicted RBP6.12□□□□□ -1.43
KDM3B-209ENST00000542866 TUBB4AP04350 444 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 TPM1P09493 284 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 TOP1P11387 765 aaKnown RBP6.12□□□□□ -1.43
KDM3B-209ENST00000542866 MARCKSP29966 332 aaPredicted RBP6.12□□□□□ -1.43
KDM3B-209ENST00000542866 MMP14P50281 582 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 NLRP12P59046 1061 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 LRRFIP1Q32MZ4 808 aaKnown RBP6.12□□□□□ -1.43
KDM3B-209ENST00000542866 DPF2Q92785 391 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 AK7Q96M32 723 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 SRRTQ9BXP5 876 aaKnown RBP6.12□□□□□ -1.43
KDM3B-209ENST00000542866 SPTLC2O15270 562 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 ZSCAN12O43309 604 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 TFCP2Q12800 502 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 KAZALD1Q96I82 304 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 NEUROD6Q96NK8 337 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 ARFGAP3Q9NP61 516 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 RSPH14Q9UHP6 348 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 PHLPP2Q6ZVD8 1323 aa6.12□□□□□ -1.43
KDM3B-209ENST00000542866 A0A0G2JLW4 131 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 TRIM66O15016 1216 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 APBA3O96018 575 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 CCDC158Q5M9N0 1113 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 USPL1Q5W0Q7 1092 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 CC2D1AQ6P1N0 951 aaPredicted RBP6.11□□□□□ -1.43
KDM3B-209ENST00000542866 TRIM65Q6PJ69 517 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 LINC00301Q8NCQ3 95 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 LINS1Q8NG48 757 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 ZNF496Q96IT1 587 aaPredicted RBP6.11□□□□□ -1.43
KDM3B-209ENST00000542866 C8orf76Q96K31 380 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 RASSF4Q9H2L5 321 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 SNRKQ9NRH2 765 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 GJB4Q9NTQ9 266 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 DBNLQ9UJU6 430 aaKnown RBP6.11□□□□□ -1.43
KDM3B-209ENST00000542866 CCNL1Q9UK58 526 aaPredicted RBP6.11□□□□□ -1.43
KDM3B-209ENST00000542866 COL15A1P39059 1388 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 MON2Q7Z3U7 1717 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 MED1Q15648 1581 aaPredicted RBP6.11□□□□□ -1.43
KDM3B-209ENST00000542866 TMEM232C9JQI7 657 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 CBFA2T2O43439 604 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 TRIM37O94972 964 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 TBC1D8O95759 1140 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 PPP2R3AQ06190 1150 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 KARSQ15046 597 aaKnown RBP6.11□□□□□ -1.43
KDM3B-209ENST00000542866 ATL3Q6DD88 541 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 DBNDD2Q9BQY9 259 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 RTEL1Q9NZ71 1219 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 CWC15Q9P013 229 aaKnown RBP6.11□□□□□ -1.43
KDM3B-209ENST00000542866 PARP3Q9Y6F1 533 aa6.11□□□□□ -1.43
KDM3B-209ENST00000542866 RGPD8O14715 1765 aaPredicted RBP6.11□□□□□ -1.43
KDM3B-209ENST00000542866 PHLPP1O60346 1717 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms