RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 CDAN1Q8IWY9 1227 aa10.24□□□□□ -0.77
CHMP4A-209ENST00000542700 ZBTB38Q8NAP3 1195 aaPredicted RBP10.24□□□□□ -0.77
CHMP4A-209ENST00000542700 PHACTR3Q96KR7 559 aa10.24□□□□□ -0.77
CHMP4A-209ENST00000542700 PANK3Q9H999 370 aa10.24□□□□□ -0.77
CHMP4A-209ENST00000542700 SEC31BQ9NQW1 1179 aa10.24□□□□□ -0.77
CHMP4A-209ENST00000542700 XDHP47989 1333 aa10.24□□□□□ -0.77
CHMP4A-209ENST00000542700 AOX1Q06278 1338 aa10.24□□□□□ -0.77
CHMP4A-209ENST00000542700 PDHXO00330 501 aa10.23□□□□□ -0.77
CHMP4A-209ENST00000542700 ATP2B4P23634 1241 aa10.23□□□□□ -0.77
CHMP4A-209ENST00000542700 MAP3K9P80192 1104 aa10.23□□□□□ -0.77
CHMP4A-209ENST00000542700 RTL5Q5HYW3 569 aaPredicted RBP10.23□□□□□ -0.77
CHMP4A-209ENST00000542700 MTMR14Q8NCE2 650 aa10.23□□□□□ -0.77
CHMP4A-209ENST00000542700 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.23□□□□□ -0.77
CHMP4A-209ENST00000542700 FAM89AQ96GI7 184 aa10.23□□□□□ -0.77
CHMP4A-209ENST00000542700 MED23Q9ULK4 1368 aa10.23□□□□□ -0.77
CHMP4A-209ENST00000542700 ECM29Q5VYK3 1845 aa10.22□□□□□ -0.77
CHMP4A-209ENST00000542700 MGAMO43451 1857 aa10.22□□□□□ -0.77
CHMP4A-209ENST00000542700 ANXA1P04083 346 aa10.22□□□□□ -0.77
CHMP4A-209ENST00000542700 IRF5Q13568 498 aa10.22□□□□□ -0.77
CHMP4A-209ENST00000542700 TTLL5Q6EMB2 1281 aa10.22□□□□□ -0.77
CHMP4A-209ENST00000542700 POTEEQ6S8J3 1075 aa10.22□□□□□ -0.77
CHMP4A-209ENST00000542700 LRP10Q7Z4F1 713 aa10.22□□□□□ -0.77
CHMP4A-209ENST00000542700 SPDYE2BA6NHP3 402 aa10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 TNPO2O14787 897 aaKnown RBP10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 SPDYE6P0CI01 402 aa10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 PRKAR2BP31323 418 aa10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 TAF7Q15545 349 aaPredicted RBP10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 PROSER3Q2NL68 480 aa10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 CFAP100Q494V2 611 aa10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 ANKRD23Q86SG2 305 aa10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 ERO1BQ86YB8 467 aa10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 C11orf16Q9NQ32 467 aa10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 SNCAIPQ9Y6H5 919 aa10.21□□□□□ -0.77
CHMP4A-209ENST00000542700 F8W031 263 aaPredicted RBP10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 BCRP11274 1271 aa10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 GTF2IP78347 998 aa10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 AIMP1Q12904 312 aaKnown RBP10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 CCDC85BQ15834 202 aaPredicted RBP10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 PRMT6Q96LA8 375 aaPredicted RBP10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 PARK7Q99497 189 aaKnown RBP10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 COA1Q9GZY4 146 aa10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 HMX1Q9NP08 348 aaPredicted RBP10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
CHMP4A-209ENST00000542700 TCF20Q9UGU0 1960 aaKnown RBP10.19□□□□□ -0.78
CHMP4A-209ENST00000542700 COL3A1P02461 1466 aaPredicted RBP10.19□□□□□ -0.78
CHMP4A-209ENST00000542700 CYP2C8P10632 490 aa10.19□□□□□ -0.78
CHMP4A-209ENST00000542700 COL6A1P12109 1028 aa10.19□□□□□ -0.78
CHMP4A-209ENST00000542700 EIF4A1P60842 406 aaKnown RBP10.19□□□□□ -0.78
CHMP4A-209ENST00000542700 NHLH1Q02575 133 aa10.19□□□□□ -0.78
CHMP4A-209ENST00000542700 TRIM32Q13049 653 aa10.19□□□□□ -0.78
CHMP4A-209ENST00000542700 PPIL2Q13356 520 aa10.19□□□□□ -0.78
CHMP4A-209ENST00000542700 PDE3AQ14432 1141 aa10.19□□□□□ -0.78
CHMP4A-209ENST00000542700 IRS4O14654 1257 aaPredicted RBP10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 GPR37L1O60883 481 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 HMGCRP04035 888 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 RBM5P52756 815 aaKnown RBP eCLIP10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 TNFAIP1Q13829 316 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 PDIA6Q15084 440 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 COPS6Q7L5N1 327 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 TXNRD3Q86VQ6 643 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 XAGE3Q8WTP9 111 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 ZKSCAN4Q969J2 545 aaPredicted RBP10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 TEPSINQ96N21 525 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 CCDC85AQ96PX6 553 aaPredicted RBP10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 WRNIP1Q96S55 665 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 GAS2L1Q99501 681 aaPredicted RBP10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 PRKAG2Q9UGJ0 569 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 LTBP2Q14767 1821 aa10.18□□□□□ -0.78
CHMP4A-209ENST00000542700 MAST2Q6P0Q8 1798 aa10.17□□□□□ -0.78
CHMP4A-209ENST00000542700 U2AF1L5P0DN76 240 aaPredicted RBP10.17□□□□□ -0.78
CHMP4A-209ENST00000542700 BMP1P13497 986 aa10.17□□□□□ -0.78
CHMP4A-209ENST00000542700 EIF2S2P20042 333 aaKnown RBP10.17□□□□□ -0.78
CHMP4A-209ENST00000542700 U2AF1Q01081 240 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHMP4A-209ENST00000542700 AKNAD1Q5T1N1 836 aa10.17□□□□□ -0.78
CHMP4A-209ENST00000542700 CERS5Q8N5B7 392 aa10.17□□□□□ -0.78
CHMP4A-209ENST00000542700 TMEM39BQ9GZU3 492 aa10.17□□□□□ -0.78
CHMP4A-209ENST00000542700 ATP5J2-PTCD1G3V325 749 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 SMIM22K7EJ46 135 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 DNAJB2P25686 324 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 KLRK1P26718 216 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 KCNQ1P51787 676 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 RIC3Q7Z5B4 369 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 ANKRD18AQ8IVF6 992 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 RSPH6AQ9H0K4 717 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 ZNF576Q9H609 170 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 TIMELESSQ9UNS1 1208 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 KNSTRNQ9Y448 316 aa10.16□□□□□ -0.78
CHMP4A-209ENST00000542700 TCP10L2B9ZVM9 353 aa10.15□□□□□ -0.78
CHMP4A-209ENST00000542700 FOXK2Q01167 660 aa10.15□□□□□ -0.78
CHMP4A-209ENST00000542700 TFF2Q03403 129 aa10.15□□□□□ -0.78
CHMP4A-209ENST00000542700 KHSRPQ92945 711 aaKnown RBP eCLIP10.15□□□□□ -0.78
CHMP4A-209ENST00000542700 COA7Q96BR5 231 aa10.15□□□□□ -0.78
CHMP4A-209ENST00000542700 RNPC3Q96LT9 517 aaKnown RBP10.15□□□□□ -0.78
CHMP4A-209ENST00000542700 ZNF70Q9UC06 446 aaPredicted RBP10.15□□□□□ -0.78
CHMP4A-209ENST00000542700 ARAP2Q8WZ64 1704 aa10.14□□□□□ -0.79
CHMP4A-209ENST00000542700 CCT4P50991 539 aaKnown RBP10.14□□□□□ -0.79
CHMP4A-209ENST00000542700 ATN1P54259 1190 aaPredicted RBP10.14□□□□□ -0.79
CHMP4A-209ENST00000542700 PPATQ06203 517 aa10.14□□□□□ -0.79
CHMP4A-209ENST00000542700 MOGSQ13724 837 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms