RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 NCLP19338 710 aaKnown RBP20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 CAVIN4Q5BKX8 364 aa20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 RAB11FIP4Q86YS3 637 aa20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 DDX11Q96FC9 970 aa20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 TPRNQ4KMQ1 711 aa20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 MB21D2Q8IYB1 491 aaPredicted RBP20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 STK11IPQ8N1F8 1099 aa20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 AGXT2Q9BYV1 514 aa20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 RAI14Q9P0K7 980 aa20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 GSG1L2A8MUP6 293 aa20.42■□□□□ 0.86
TMEM50B-210ENST00000542230 ZNF772Q68DY9 489 aaPredicted RBP20.42■□□□□ 0.86
TMEM50B-210ENST00000542230 FERMT3Q86UX7 667 aa20.42■□□□□ 0.86
TMEM50B-210ENST00000542230 F13A1P00488 732 aa20.42■□□□□ 0.86
TMEM50B-210ENST00000542230 CYP7A1P22680 504 aa20.42■□□□□ 0.86
TMEM50B-210ENST00000542230 LARP1BQ659C4 914 aaKnown RBP20.42■□□□□ 0.86
TMEM50B-210ENST00000542230 CDC37L1Q7L3B6 337 aa20.42■□□□□ 0.86
TMEM50B-210ENST00000542230 IFNL3Q8IZI9 196 aa20.42■□□□□ 0.86
TMEM50B-210ENST00000542230 RBM27Q9P2N5 1060 aaKnown RBP20.42■□□□□ 0.86
TMEM50B-210ENST00000542230 CNPY2Q9Y2B0 182 aa20.42■□□□□ 0.86
TMEM50B-210ENST00000542230 GADD45BO75293 160 aaPredicted RBP20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 CTDNEP1O95476 244 aa20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 CTDSPL2Q05D32 466 aa20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 FAM173BQ6P4H8 233 aa20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 GNL3LQ9NVN8 582 aaKnown RBP20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 PRC1O43663 620 aa20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 GRAPQ13588 217 aa20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 KLHL40Q2TBA0 621 aa20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 GAS2L3Q86XJ1 694 aa20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 GRAPLQ8TC17 118 aaPredicted RBP20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 ANKIB1Q9P2G1 1089 aa20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 BRPF3Q9ULD4 1205 aa20.41■□□□□ 0.86
TMEM50B-210ENST00000542230 PATL2C9JE40 543 aaKnown RBP20.4■□□□□ 0.86
TMEM50B-210ENST00000542230 PDIA3P30101 505 aaKnown RBP20.4■□□□□ 0.86
TMEM50B-210ENST00000542230 CHAF1AQ13111 956 aaPredicted RBP20.4■□□□□ 0.86
TMEM50B-210ENST00000542230 SKOR2Q2VWA4 1001 aaPredicted RBP20.4■□□□□ 0.86
TMEM50B-210ENST00000542230 CYB5R4Q7L1T6 521 aa20.4■□□□□ 0.86
TMEM50B-210ENST00000542230 NEDD4P46934 1319 aa20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 IRS2Q9Y4H2 1338 aa20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 POLRMTO00411 1230 aaKnown RBP20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 PFKFB2O60825 505 aa20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 HIBADHP31937 336 aaKnown RBP20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 DYNLL1P63167 89 aaKnown RBP20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 CAVIN1Q6NZI2 390 aaKnown RBP20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 SDR42E1Q8WUS8 393 aa20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 SENP2Q9HC62 589 aa20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 SLC4A4Q9Y6R1 1079 aa20.39■□□□□ 0.86
TMEM50B-210ENST00000542230 FOSBP53539 338 aa20.39■□□□□ 0.85
TMEM50B-210ENST00000542230 USP48Q86UV5 1035 aa20.39■□□□□ 0.85
TMEM50B-210ENST00000542230 ANKRD2Q9GZV1 360 aa20.39■□□□□ 0.85
TMEM50B-210ENST00000542230 B4E1Z4 1266 aa20.38■□□□□ 0.85
TMEM50B-210ENST00000542230 NCOA7Q8NI08 942 aa20.38■□□□□ 0.85
TMEM50B-210ENST00000542230 PRDX5P30044 214 aa20.38■□□□□ 0.85
TMEM50B-210ENST00000542230 DNM1Q05193 864 aaKnown RBP20.38■□□□□ 0.85
TMEM50B-210ENST00000542230 MCM5P33992 734 aa20.37■□□□□ 0.85
TMEM50B-210ENST00000542230 CRY2Q49AN0 593 aa20.37■□□□□ 0.85
TMEM50B-210ENST00000542230 RPGRQ92834 1020 aaKnown RBP20.37■□□□□ 0.85
TMEM50B-210ENST00000542230 NAPBQ9H115 298 aa20.37■□□□□ 0.85
TMEM50B-210ENST00000542230 RGS17Q9UGC6 210 aaPredicted RBP20.37■□□□□ 0.85
TMEM50B-210ENST00000542230 RXRBP28702 533 aa20.37■□□□□ 0.85
TMEM50B-210ENST00000542230 RALYLQ86SE5 291 aaKnown RBP20.37■□□□□ 0.85
TMEM50B-210ENST00000542230 NSUN7Q8NE18 718 aaKnown RBP20.37■□□□□ 0.85
TMEM50B-210ENST00000542230 CACNA1SQ13698 1873 aa20.36■□□□□ 0.85
TMEM50B-210ENST00000542230 GPSM2P81274 684 aa20.36■□□□□ 0.85
TMEM50B-210ENST00000542230 AKT1S1Q96B36 256 aa20.36■□□□□ 0.85
TMEM50B-210ENST00000542230 FSD2A1L4K1 749 aa20.36■□□□□ 0.85
TMEM50B-210ENST00000542230 PTMSP20962 102 aa20.36■□□□□ 0.85
TMEM50B-210ENST00000542230 ST5P78524 1137 aa20.36■□□□□ 0.85
TMEM50B-210ENST00000542230 EVX2Q03828 476 aa20.36■□□□□ 0.85
TMEM50B-210ENST00000542230 RIOK1Q9BRS2 568 aaKnown RBP20.36■□□□□ 0.85
TMEM50B-210ENST00000542230 ALX1Q15699 326 aa20.35■□□□□ 0.85
TMEM50B-210ENST00000542230 HPS5Q9UPZ3 1129 aa20.35■□□□□ 0.85
TMEM50B-210ENST00000542230 PLSCR1O15162 318 aa20.35■□□□□ 0.85
TMEM50B-210ENST00000542230 FIBPO43427 364 aa20.35■□□□□ 0.85
TMEM50B-210ENST00000542230 TDO2P48775 406 aa20.35■□□□□ 0.85
TMEM50B-210ENST00000542230 MECOMQ03112 1051 aa20.35■□□□□ 0.85
TMEM50B-210ENST00000542230 GRIK5Q16478 980 aa20.35■□□□□ 0.85
TMEM50B-210ENST00000542230 MSL1Q68DK7 614 aa20.35■□□□□ 0.85
TMEM50B-210ENST00000542230 NSUN4Q96CB9 384 aaKnown RBP20.35■□□□□ 0.85
TMEM50B-210ENST00000542230 PNPLA7Q6ZV29 1317 aa20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 CYP2D7A0A087X1C5 515 aa20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 KLF18A0A0U1RQI7 1052 aa20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 PTPDC1A2A3K4 754 aa20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 RXRAP19793 462 aa20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 SMARCC2Q8TAQ2 1214 aa20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 TMEM63CQ9P1W3 806 aa20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 MAGEB6P1A0A0J9YX57 407 aa20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 NAA16Q6N069 864 aaPredicted RBP20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 POTEAQ6S8J7 498 aa20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 OLFM4Q6UX06 510 aa20.34■□□□□ 0.85
TMEM50B-210ENST00000542230 ZNF274Q96GC6 653 aaPredicted RBP20.33■□□□□ 0.85
TMEM50B-210ENST00000542230 GOLGA6L3A6NEY3 463 aa20.32■□□□□ 0.84
TMEM50B-210ENST00000542230 TRDNQ13061 729 aa20.32■□□□□ 0.84
TMEM50B-210ENST00000542230 ZSWIM5Q9P217 1185 aa20.32■□□□□ 0.84
TMEM50B-210ENST00000542230 KDM4AO75164 1064 aa20.32■□□□□ 0.84
TMEM50B-210ENST00000542230 XRCC6P12956 609 aaKnown RBP eCLIP20.32■□□□□ 0.84
TMEM50B-210ENST00000542230 EVCP57679 992 aa20.32■□□□□ 0.84
TMEM50B-210ENST00000542230 RRP12Q5JTH9 1297 aaKnown RBP20.32■□□□□ 0.84
TMEM50B-210ENST00000542230 FBXL16Q8N461 479 aa20.32■□□□□ 0.84
TMEM50B-210ENST00000542230 XDHP47989 1333 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms