RNA–Protein interactions for RNA: ENST00000542191.5

SNCAIP-222, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5 BASIC

Gene SNCAIP, Length 2,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-222ENST00000542191 DSCC1Q9BVC3 393 aa16.4■□□□□ 0.22
SNCAIP-222ENST00000542191 PDGFDQ9GZP0 370 aaPredicted RBP16.4■□□□□ 0.22
SNCAIP-222ENST00000542191 BSDC1Q9NW68 430 aaPredicted RBP16.4■□□□□ 0.22
SNCAIP-222ENST00000542191 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.4■□□□□ 0.22
SNCAIP-222ENST00000542191 CASZ1Q86V15 1759 aa16.4■□□□□ 0.22
SNCAIP-222ENST00000542191 SERPINB2P05120 415 aa16.4■□□□□ 0.22
SNCAIP-222ENST00000542191 SF3B3Q15393 1217 aaKnown RBP16.4■□□□□ 0.22
SNCAIP-222ENST00000542191 GRIK5Q16478 980 aa16.4■□□□□ 0.22
SNCAIP-222ENST00000542191 C4BP0C0L5 1744 aa16.4■□□□□ 0.22
SNCAIP-222ENST00000542191 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
SNCAIP-222ENST00000542191 MAP3K12Q12852 859 aa16.39■□□□□ 0.22
SNCAIP-222ENST00000542191 DHX32Q7L7V1 743 aaKnown RBP16.39■□□□□ 0.22
SNCAIP-222ENST00000542191 ZNF384Q8TF68 577 aa16.39■□□□□ 0.22
SNCAIP-222ENST00000542191 INTS4Q96HW7 963 aaKnown RBP16.39■□□□□ 0.22
SNCAIP-222ENST00000542191 SLC4A4Q9Y6R1 1079 aa16.39■□□□□ 0.22
SNCAIP-222ENST00000542191 NHSQ6T4R5 1651 aa16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 BAZ2BQ9UIF8 2168 aaKnown RBP16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 USP48Q86UV5 1035 aa16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 CMTR1Q8N1G2 835 aaKnown RBP16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 FTOQ9C0B1 505 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 NEDD4P46934 1319 aa16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 PRC1O43663 620 aa16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 UQCRFS1P1P0C7P4 283 aa16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 TDO2P48775 406 aa16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 CYB5R4Q7L1T6 521 aa16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 STRBPQ96SI9 672 aaKnown RBP16.39■□□□□ 0.21
SNCAIP-222ENST00000542191 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 MYH7P12883 1935 aa16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 RIMBP2O15034 1052 aa16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 ZSCAN22P10073 491 aaPredicted RBP16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 ANTXR2P58335 489 aa16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 FBXW7Q969H0 707 aa16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 IL17RAQ96F46 866 aa16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 NYXQ9GZU5 481 aa16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 AATFQ9NY61 560 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 MTMR6Q9Y217 621 aa16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 NAPBQ9H115 298 aa16.38■□□□□ 0.21
SNCAIP-222ENST00000542191 C4AP0C0L4 1744 aa16.37■□□□□ 0.21
SNCAIP-222ENST00000542191 RALYLQ86SE5 291 aaKnown RBP16.37■□□□□ 0.21
SNCAIP-222ENST00000542191 RPGRQ92834 1020 aaKnown RBP16.37■□□□□ 0.21
SNCAIP-222ENST00000542191 LAMB2P55268 1798 aa16.37■□□□□ 0.21
SNCAIP-222ENST00000542191 KLF18A0A0U1RQI7 1052 aa16.37■□□□□ 0.21
SNCAIP-222ENST00000542191 ZFYP08048 801 aaPredicted RBP16.37■□□□□ 0.21
SNCAIP-222ENST00000542191 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
SNCAIP-222ENST00000542191 DIXDC1Q155Q3 683 aa16.37■□□□□ 0.21
SNCAIP-222ENST00000542191 MICU3Q86XE3 530 aa16.37■□□□□ 0.21
SNCAIP-222ENST00000542191 RREB1Q92766 1687 aa16.37■□□□□ 0.21
SNCAIP-222ENST00000542191 EPB41L2O43491 1005 aaKnown RBP16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 F13A1P00488 732 aa16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 KRT32Q14532 448 aa16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 IFNL3Q8IZI9 196 aa16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 GTF3C6Q969F1 213 aa16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 AIFM3Q96NN9 605 aa16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 TMEM63CQ9P1W3 806 aa16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 ZNF804BA4D1E1 1349 aa16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 WDR33Q9C0J8 1336 aaKnown RBP16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 CTDNEP1O95476 244 aa16.36■□□□□ 0.21
SNCAIP-222ENST00000542191 SYCE3A1L190 88 aa16.35■□□□□ 0.21
SNCAIP-222ENST00000542191 GSG1L2A8MUP6 293 aa16.35■□□□□ 0.21
SNCAIP-222ENST00000542191 SH2B1Q9NRF2 756 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-222ENST00000542191 MTMR7Q9Y216 660 aa16.35■□□□□ 0.21
SNCAIP-222ENST00000542191 GOLGA6L3A6NEY3 463 aa16.35■□□□□ 0.21
SNCAIP-222ENST00000542191 GOLGA8BA8MQT2 603 aa16.35■□□□□ 0.21
SNCAIP-222ENST00000542191 F8W031 263 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-222ENST00000542191 POTEAQ6S8J7 498 aa16.35■□□□□ 0.21
SNCAIP-222ENST00000542191 MYH13Q9UKX3 1938 aa16.35■□□□□ 0.21
SNCAIP-222ENST00000542191 BAZ2AQ9UIF9 1905 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 XRCC6P12956 609 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 HIBADHP31937 336 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 EN1Q05925 392 aaPredicted RBP16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 RNF214Q8ND24 703 aa16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 ZSCAN31Q96LW9 406 aaPredicted RBP16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 PTPDC1A2A3K4 754 aa16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 PDIA3P30101 505 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 ADD1P35611 737 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 GPSM2P81274 684 aa16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 TSGA10IPQ3SY00 556 aa16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 SLC10A5Q5PT55 438 aa16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 FAM184AQ8NB25 1140 aa16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 PHKBQ93100 1093 aa16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 MXD3Q9BW11 206 aa16.34■□□□□ 0.21
SNCAIP-222ENST00000542191 UFL1O94874 794 aa16.33■□□□□ 0.21
SNCAIP-222ENST00000542191 RBM6P78332 1123 aaKnown RBP16.33■□□□□ 0.21
SNCAIP-222ENST00000542191 UBE3CQ15386 1083 aa16.33■□□□□ 0.21
SNCAIP-222ENST00000542191 LRRFIP1Q32MZ4 808 aaKnown RBP16.33■□□□□ 0.21
SNCAIP-222ENST00000542191 ZSCAN25Q6NSZ9 544 aa16.33■□□□□ 0.21
SNCAIP-222ENST00000542191 SCN7AQ01118 1682 aa16.33■□□□□ 0.21
SNCAIP-222ENST00000542191 C6orf229H3BNL8 230 aa16.33■□□□□ 0.2
SNCAIP-222ENST00000542191 CYP2D6P10635 497 aa16.33■□□□□ 0.2
SNCAIP-222ENST00000542191 MECOMQ03112 1051 aa16.33■□□□□ 0.2
SNCAIP-222ENST00000542191 LY75O60449 1722 aa16.33■□□□□ 0.2
SNCAIP-222ENST00000542191 RFX7Q2KHR2 1363 aa16.33■□□□□ 0.2
SNCAIP-222ENST00000542191 hCG_1642624A0A1W2PR95 340 aa16.32■□□□□ 0.2
SNCAIP-222ENST00000542191 H3BQV1 296 aa16.32■□□□□ 0.2
SNCAIP-222ENST00000542191 IFFO2Q5TF58 517 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms