RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 CASQ2O14958 399 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-204ENST00000541819 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
GABRB3-204ENST00000541819 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 MICALL1Q8N3F8 863 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 CEP120Q8N960 986 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 IFT74Q96LB3 600 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 RAB3IPQ96QF0 476 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-204ENST00000541819 TFCP2L1Q9NZI6 479 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 EXOC7Q9UPT5 735 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 NOC2LQ9Y3T9 749 aaKnown RBP12.06□□□□□ -0.48
GABRB3-204ENST00000541819 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 SPTLC2O15270 562 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 NBPF11Q86T75 865 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 CDAN1Q8IWY9 1227 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 CNPY2Q9Y2B0 182 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 SARNPP82979 210 aaKnown RBP12.05□□□□□ -0.48
GABRB3-204ENST00000541819 NOX5Q96PH1 765 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 PAG1Q9NWQ8 432 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 FEZ2Q9UHY8 353 aaPredicted RBP12.05□□□□□ -0.48
GABRB3-204ENST00000541819 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 CHRNA2Q15822 529 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 VWA3BQ502W6 1294 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 SV2BQ7L1I2 683 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 RSPH3Q86UC2 560 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 FAM200AQ8TCP9 573 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 XAGE3Q8WTP9 111 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 RTCBQ9Y3I0 505 aaKnown RBP12.05□□□□□ -0.48
GABRB3-204ENST00000541819 AFG3L2Q9Y4W6 797 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 PPP1R2P41236 205 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 CEP85LQ5SZL2 805 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 CEP57Q86XR8 500 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 TRIM6Q9C030 488 aaPredicted RBP12.05□□□□□ -0.48
GABRB3-204ENST00000541819 MBIPQ9NS73 344 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 SUPT6HQ7KZ85 1726 aaKnown RBP12.05□□□□□ -0.48
GABRB3-204ENST00000541819 SPOPO43791 374 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 TMX3Q96JJ7 454 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 PKD2L1Q9P0L9 805 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 SBNO2Q9Y2G9 1366 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 TOM1O60784 492 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 DKC1O60832 514 aaKnown RBP eCLIP12.05□□□□□ -0.48
GABRB3-204ENST00000541819 KLHL40Q2TBA0 621 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 CHPF2Q9P2E5 772 aa12.05□□□□□ -0.48
GABRB3-204ENST00000541819 EBAG9O00559 213 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 TNFAIP3P21580 790 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 RILPL1Q5EBL4 403 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 MAGEB6Q8N7X4 407 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 CCDC89Q8N998 374 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 BEGAINQ9BUH8 593 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 CALUO43852 315 aaPredicted RBP12.04□□□□□ -0.48
GABRB3-204ENST00000541819 TTC6Q86TZ1 520 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 DZIP3Q86Y13 1208 aaKnown RBP12.04□□□□□ -0.48
GABRB3-204ENST00000541819 VCX3BQ9H321 246 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 MRC2Q9UBG0 1479 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 CCDC169A6NNP5 214 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 ZNF569Q5MCW4 686 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 NCAPGQ9BPX3 1015 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.04□□□□□ -0.48
GABRB3-204ENST00000541819 RNF113AO15541 343 aaKnown RBP12.04□□□□□ -0.48
GABRB3-204ENST00000541819 ZEB2O60315 1214 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 ALDH1L1O75891 902 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 NEDD9Q14511 834 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 PPANQ9NQ55 473 aaKnown RBP12.04□□□□□ -0.48
GABRB3-204ENST00000541819 FAM114A2Q9NRY5 505 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 IVNS1ABPQ9Y6Y0 642 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 VIMP08670 466 aaKnown RBP12.04□□□□□ -0.48
GABRB3-204ENST00000541819 CAPN2P17655 700 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 DDB1Q16531 1140 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 TAOK1Q7L7X3 1001 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 NUF2Q9BZD4 464 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 DNAJC25Q9H1X3 360 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 GJA3Q9Y6H8 435 aa12.04□□□□□ -0.48
GABRB3-204ENST00000541819 M0QZ92 97 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 NOP56O00567 594 aaKnown RBP12.03□□□□□ -0.48
GABRB3-204ENST00000541819 LUC7L2Q9Y383 392 aaKnown RBP12.03□□□□□ -0.48
GABRB3-204ENST00000541819 ATP11AP98196 1134 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 SEPT14Q6ZU15 432 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 CACNA2D3Q8IZS8 1091 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 RSRC1Q96IZ7 334 aaKnown RBP12.03□□□□□ -0.48
GABRB3-204ENST00000541819 ARHGEF10LQ9HCE6 1279 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 CCDC186Q7Z3E2 898 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 MIPOL1Q8TD10 442 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 C8orf37Q96NL8 207 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 VPS18Q9P253 973 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 NSFL1CQ9UNZ2 370 aaKnown RBP12.03□□□□□ -0.48
GABRB3-204ENST00000541819 HMGB1P1B2RPK0 211 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-204ENST00000541819 STX17P56962 302 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 KARSQ15046 597 aaKnown RBP12.03□□□□□ -0.48
GABRB3-204ENST00000541819 LMBR1LQ6UX01 489 aa12.03□□□□□ -0.48
GABRB3-204ENST00000541819 CCT6AP40227 531 aaKnown RBP12.02□□□□□ -0.48
GABRB3-204ENST00000541819 SPOUT1Q5T280 376 aaKnown RBP12.02□□□□□ -0.48
GABRB3-204ENST00000541819 GKAP1Q5VSY0 366 aaPredicted RBP12.02□□□□□ -0.48
GABRB3-204ENST00000541819 IQUBQ8NA54 791 aa12.02□□□□□ -0.48
GABRB3-204ENST00000541819 GRM8O00222 908 aa12.02□□□□□ -0.48
GABRB3-204ENST00000541819 RAB3GAP1Q15042 981 aa12.02□□□□□ -0.48
GABRB3-204ENST00000541819 COPS6Q7L5N1 327 aa12.02□□□□□ -0.48
GABRB3-204ENST00000541819 USP48Q86UV5 1035 aa12.02□□□□□ -0.48
GABRB3-204ENST00000541819 MIGA1Q8NAN2 632 aa12.02□□□□□ -0.48
GABRB3-204ENST00000541819 FAM76AQ8TAV0 307 aa12.02□□□□□ -0.48
GABRB3-204ENST00000541819 F13A1P00488 732 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms