RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 DMRTA1Q5VZB9 504 aa8.11□□□□□ -1.11
EPHA4-214ENST00000541600 POTEEQ6S8J3 1075 aa8.11□□□□□ -1.11
EPHA4-214ENST00000541600 ARMC2Q8NEN0 867 aa8.11□□□□□ -1.11
EPHA4-214ENST00000541600 DNAAF4Q8WXU2 420 aa8.11□□□□□ -1.11
EPHA4-214ENST00000541600 KCNB2Q92953 911 aa8.11□□□□□ -1.11
EPHA4-214ENST00000541600 ZFRQ96KR1 1074 aaKnown RBP8.11□□□□□ -1.11
EPHA4-214ENST00000541600 SCUBE2Q9NQ36 999 aa8.11□□□□□ -1.11
EPHA4-214ENST00000541600 DBF4Q9UBU7 674 aaPredicted RBP8.11□□□□□ -1.11
EPHA4-214ENST00000541600 LRRFIP2Q9Y608 721 aaKnown RBP8.11□□□□□ -1.11
EPHA4-214ENST00000541600 RGPD2P0DJD1 1756 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 TTC41PQ6P2S7 1318 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 TOMM70O94826 608 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 HSP90AA1P07900 732 aaKnown RBP8.1□□□□□ -1.11
EPHA4-214ENST00000541600 OCLNQ16625 522 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 TICAM2Q86XR7 235 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 SIX5Q8N196 739 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 THAP11Q96EK4 314 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 NBPF3Q9H094 633 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 GRPEL1Q9HAV7 217 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 NOD1Q9Y239 953 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 EXOC6BQ9Y2D4 811 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 COL15A1P39059 1388 aa8.1□□□□□ -1.11
EPHA4-214ENST00000541600 PNPLA7Q6ZV29 1317 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 POTEB2H3BUK9 544 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 HSPA4P34932 840 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 TEFQ10587 303 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 TSGA10IPQ3SY00 556 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 ZNF530Q6P9A1 599 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-214ENST00000541600 KSR2Q6VAB6 950 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 PPP1R42Q7Z4L9 355 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 ERC1Q8IUD2 1116 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 PI4K2BQ8TCG2 481 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 RHPN1Q8TCX5 695 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 LGR6Q9HBX8 967 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 NMRK2Q9NPI5 230 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 LMBRD1Q9NUN5 540 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 EVA1BQ9NVM1 165 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 HYPKQ9NX55 129 aa8.09□□□□□ -1.11
EPHA4-214ENST00000541600 CXXC1Q9P0U4 656 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-214ENST00000541600 PARP4Q9UKK3 1724 aaKnown RBP8.09□□□□□ -1.11
EPHA4-214ENST00000541600 COL18A1P39060 1754 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 SCN11AQ9UI33 1791 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 AK9Q5TCS8 1911 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 BTBD11A6QL63 1104 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 BHMG1C9JSJ3 638 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-214ENST00000541600 SGSM2O43147 1006 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 PRMT3O60678 531 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 ICMTO60725 284 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 FMNL1O95466 1100 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-214ENST00000541600 MAMSTRQ6ZN01 415 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 FBXO33Q7Z6M2 555 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 SCUBE3Q8IX30 993 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 ADAM32Q8TC27 787 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 PPP1R9BQ96SB3 815 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 TM6SF1Q9BZW5 370 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 PHAXQ9H814 394 aaKnown RBP8.08□□□□□ -1.12
EPHA4-214ENST00000541600 DDX21Q9NR30 783 aaKnown RBP eCLIP8.08□□□□□ -1.12
EPHA4-214ENST00000541600 KIAA1024Q9UPX6 916 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 ZDHHC9Q9Y397 364 aa8.08□□□□□ -1.12
EPHA4-214ENST00000541600 PI4KAP2A4QPH2 592 aa8.07□□□□□ -1.12
EPHA4-214ENST00000541600 H3BRB1 525 aa8.07□□□□□ -1.12
EPHA4-214ENST00000541600 SURF6O75683 361 aaKnown RBP8.07□□□□□ -1.12
EPHA4-214ENST00000541600 GLRX3O76003 335 aaKnown RBP8.07□□□□□ -1.12
EPHA4-214ENST00000541600 ABL1P00519 1130 aa8.07□□□□□ -1.12
EPHA4-214ENST00000541600 CCNYL3P0C7X3 344 aa8.07□□□□□ -1.12
EPHA4-214ENST00000541600 HSP90B1P14625 803 aaKnown RBP8.07□□□□□ -1.12
EPHA4-214ENST00000541600 SEC13P55735 322 aa8.07□□□□□ -1.12
EPHA4-214ENST00000541600 C1orf141Q5JVX7 400 aa8.07□□□□□ -1.12
EPHA4-214ENST00000541600 NUTM2GQ5VZR2 741 aa8.07□□□□□ -1.12
EPHA4-214ENST00000541600 PI4KAP1Q8N8J0 262 aa8.07□□□□□ -1.12
EPHA4-214ENST00000541600 LINS1Q8NG48 757 aa8.07□□□□□ -1.12
EPHA4-214ENST00000541600 LTV1Q96GA3 475 aaPredicted RBP8.07□□□□□ -1.12
EPHA4-214ENST00000541600 TMX3Q96JJ7 454 aa8.07□□□□□ -1.12
EPHA4-214ENST00000541600 TUT1Q9H6E5 874 aaKnown RBP8.07□□□□□ -1.12
EPHA4-214ENST00000541600 MRC1P22897 1456 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 RAD50Q92878 1312 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 BCL9O00512 1426 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 SRGAP3O43295 1099 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 DDX58O95786 925 aaKnown RBP8.06□□□□□ -1.12
EPHA4-214ENST00000541600 NBPF7P0C2Y1 421 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-214ENST00000541600 NEK4P51957 841 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 ZNF211Q13398 564 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-214ENST00000541600 HS1BP3Q53T59 392 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 CNTROBQ8N137 903 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 ANKRD24Q8TF21 1146 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 RUFY2Q8WXA3 655 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 LRCH3Q96II8 777 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 PRIMPOLQ96LW4 560 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 ALDH8A1Q9H2A2 487 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-214ENST00000541600 CHPF2Q9P2E5 772 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 AXIN2Q9Y2T1 843 aa8.06□□□□□ -1.12
EPHA4-214ENST00000541600 HIP1O00291 1037 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 KCNQ3O43525 872 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 MBD3O95983 291 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 PBX2P40425 430 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 KCNQ4P56696 695 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 EVA1CP58658 441 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 GAS2L3Q86XJ1 694 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 GLYCTKQ8IVS8 523 aa8.05□□□□□ -1.12
EPHA4-214ENST00000541600 USHBP1Q8N6Y0 703 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms