RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 MCM2P49736 904 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 R3HDM1Q15032 1099 aaKnown RBP10.34□□□□□ -0.75
THBS3-210ENST00000541576 ZGPATQ8N5A5 531 aaKnown RBP10.34□□□□□ -0.75
THBS3-210ENST00000541576 WDR66Q8TBY9 1149 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 TTC14Q96N46 770 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 MTFR1LQ9H019 292 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 CTNNA3Q9UI47 895 aa10.34□□□□□ -0.75
THBS3-210ENST00000541576 MBD4O95243 580 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 IL1R1P14778 569 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 POLD1P28340 1107 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 KRT32Q14532 448 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 STRBPQ96SI9 672 aaKnown RBP10.33□□□□□ -0.76
THBS3-210ENST00000541576 ZSWIM6Q9HCJ5 1215 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 SLX4Q8IY92 1834 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 RIMBP2O15034 1052 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 SPTY2D1Q68D10 685 aaPredicted RBP10.33□□□□□ -0.76
THBS3-210ENST00000541576 TTLL5Q6EMB2 1281 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 NAA16Q6N069 864 aaPredicted RBP10.33□□□□□ -0.76
THBS3-210ENST00000541576 NOL8Q76FK4 1167 aaKnown RBP10.33□□□□□ -0.76
THBS3-210ENST00000541576 ZC3H12CQ9C0D7 883 aaKnown RBP10.33□□□□□ -0.76
THBS3-210ENST00000541576 ATF5Q9Y2D1 282 aaPredicted RBP10.33□□□□□ -0.76
THBS3-210ENST00000541576 CYP46A1Q9Y6A2 500 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 SALL1Q9NSC2 1324 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 DUOX1Q9NRD9 1551 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 RPAP1Q9BWH6 1393 aaPredicted RBP10.33□□□□□ -0.76
THBS3-210ENST00000541576 XRCC6P12956 609 aaKnown RBP eCLIP10.33□□□□□ -0.76
THBS3-210ENST00000541576 PRDX5P30044 214 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 DDIT3P35638 169 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 NSUN4Q96CB9 384 aaKnown RBP10.33□□□□□ -0.76
THBS3-210ENST00000541576 ARMT1Q9H993 441 aa10.33□□□□□ -0.76
THBS3-210ENST00000541576 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
THBS3-210ENST00000541576 FGAP02671 866 aa10.32□□□□□ -0.76
THBS3-210ENST00000541576 APPP05067 770 aa10.32□□□□□ -0.76
THBS3-210ENST00000541576 MECOMQ03112 1051 aa10.32□□□□□ -0.76
THBS3-210ENST00000541576 ADGRA1Q86SQ6 560 aa10.32□□□□□ -0.76
THBS3-210ENST00000541576 MIGA1Q8NAN2 632 aa10.32□□□□□ -0.76
THBS3-210ENST00000541576 TMX3Q96JJ7 454 aa10.32□□□□□ -0.76
THBS3-210ENST00000541576 EYA3Q99504 573 aa10.32□□□□□ -0.76
THBS3-210ENST00000541576 LARP6Q9BRS8 491 aaKnown RBP10.32□□□□□ -0.76
THBS3-210ENST00000541576 TMED8Q6PL24 325 aaPredicted RBP10.32□□□□□ -0.76
THBS3-210ENST00000541576 RUFY3Q7L099 469 aa10.32□□□□□ -0.76
THBS3-210ENST00000541576 LCORLQ8N3X6 602 aa10.32□□□□□ -0.76
THBS3-210ENST00000541576 COA1Q9GZY4 146 aa10.32□□□□□ -0.76
THBS3-210ENST00000541576 IGSF3O75054 1194 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 GNAT2P19087 354 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 AK2P54819 239 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 IMMTQ16891 758 aaKnown RBP10.31□□□□□ -0.76
THBS3-210ENST00000541576 L1TD1Q5T7N2 865 aaKnown RBP10.31□□□□□ -0.76
THBS3-210ENST00000541576 BLOC1S2Q6QNY1 142 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 STOX1Q6ZVD7 989 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 DZIP1Q86YF9 867 aaKnown RBP10.31□□□□□ -0.76
THBS3-210ENST00000541576 ZNF384Q8TF68 577 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 C7orf43Q8WVR3 580 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 PDRG1Q9NUG6 133 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 GOLGB1Q14789 3259 aaKnown RBP10.31□□□□□ -0.76
THBS3-210ENST00000541576 MAGEB6P1A0A0J9YX57 407 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 LDHBP07195 334 aaKnown RBP10.31□□□□□ -0.76
THBS3-210ENST00000541576 DPEP1P16444 411 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 CC2D2BQ6DHV5 1058 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 TTLL6Q8N841 843 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 NEK1Q96PY6 1258 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 PATL2C9JE40 543 aaKnown RBP10.31□□□□□ -0.76
THBS3-210ENST00000541576 TCEANC2Q96MN5 208 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 SLC4A4Q9Y6R1 1079 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 DLEC1Q9Y238 1755 aa10.31□□□□□ -0.76
THBS3-210ENST00000541576 CCDC88AQ3V6T2 1871 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 RBM10P98175 930 aaKnown RBP10.3□□□□□ -0.76
THBS3-210ENST00000541576 TBC1D22AQ8WUA7 517 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 KIF13BQ9NQT8 1826 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 G3V3G9 751 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 ZNF213O14771 459 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 RPS6KB1P23443 525 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 HAND2P61296 217 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 ALX1Q15699 326 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 DCAF8Q5TAQ9 597 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 TRIM44Q96DX7 344 aaPredicted RBP10.3□□□□□ -0.76
THBS3-210ENST00000541576 RIOK1Q9BRS2 568 aaKnown RBP10.3□□□□□ -0.76
THBS3-210ENST00000541576 NACAP1Q9BZK3 213 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 MAST2Q6P0Q8 1798 aa10.3□□□□□ -0.76
THBS3-210ENST00000541576 PSDA5PKW4 1024 aaPredicted RBP10.29□□□□□ -0.76
THBS3-210ENST00000541576 E7EWF7 191 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 PRKAB2O43741 272 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 C21orf2O43822 256 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 DOK7Q18PE1 504 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 MFSD14BQ5SR56 506 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 IFNL3Q8IZI9 196 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 RTFDC1Q9BY42 306 aaPredicted RBP10.29□□□□□ -0.76
THBS3-210ENST00000541576 NAPBQ9H115 298 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 ZMYM6O95789 1325 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 FAM205AQ6ZU69 1335 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 GSG1L2A8MUP6 293 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 HMGB1P09429 215 aaKnown RBP10.29□□□□□ -0.76
THBS3-210ENST00000541576 KCNA3P22001 575 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 GTF2IP78347 998 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 GSTO1P78417 241 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 CUL4AQ13619 759 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
THBS3-210ENST00000541576 CHMP5Q9NZZ3 219 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 CHD4Q14839 1912 aa10.29□□□□□ -0.76
THBS3-210ENST00000541576 TGFB2P61812 414 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms