RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 EVCP57679 992 aa17.32■□□□□ 0.36
SPOCK3-226ENST00000541354 MTA3Q9BTC8 594 aa17.32■□□□□ 0.36
SPOCK3-226ENST00000541354 MTMR6Q9Y217 621 aa17.32■□□□□ 0.36
SPOCK3-226ENST00000541354 ZNF532Q9HCE3 1301 aa17.31■□□□□ 0.36
SPOCK3-226ENST00000541354 LETM1O95202 739 aaPredicted RBP17.31■□□□□ 0.36
SPOCK3-226ENST00000541354 ME3Q16798 604 aa17.31■□□□□ 0.36
SPOCK3-226ENST00000541354 ZSCAN30Q86W11 494 aa17.31■□□□□ 0.36
SPOCK3-226ENST00000541354 MYO5AQ9Y4I1 1855 aaKnown RBP17.31■□□□□ 0.36
SPOCK3-226ENST00000541354 POLRMTO00411 1230 aaKnown RBP17.31■□□□□ 0.36
SPOCK3-226ENST00000541354 CPA1P15085 419 aa17.31■□□□□ 0.36
SPOCK3-226ENST00000541354 UBE2HP62256 183 aa17.31■□□□□ 0.36
SPOCK3-226ENST00000541354 LLPHQ9BRT6 129 aaKnown RBP17.31■□□□□ 0.36
SPOCK3-226ENST00000541354 XDHP47989 1333 aa17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 GADD45BO75293 160 aaPredicted RBP17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 GJB2P29033 226 aa17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 CSPP1Q1MSJ5 1256 aa17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 FAM84BQ96KN1 310 aaPredicted RBP17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 STRBPQ96SI9 672 aaKnown RBP17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 PUS7LQ9H0K6 701 aaKnown RBP17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 LTBP1Q14766 1721 aa17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 E7EWF7 191 aa17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 FOXP2O15409 715 aa17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 BCAMP50895 628 aa17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 TOB2Q14106 344 aaPredicted RBP17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 PODXL2Q9NZ53 605 aa17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 TAF1P21675 1872 aa17.3■□□□□ 0.36
SPOCK3-226ENST00000541354 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 PDCP20941 246 aa17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 TSPY26PQ9H489 355 aa17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 TPCN1Q9ULQ1 816 aa17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 NPHP1O15259 732 aa17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 IDH1O75874 414 aaKnown RBP17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 GIMAP6Q6P9H5 292 aa17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 PI16Q6UXB8 463 aa17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 CCDC83Q8IWF9 413 aa17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 RPGRQ92834 1020 aaKnown RBP17.29■□□□□ 0.36
SPOCK3-226ENST00000541354 ATP2B4P23634 1241 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 UVSSAQ2YD98 709 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 FAM184AQ8NB25 1140 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 AIDAQ96BJ3 306 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 CCDC88AQ3V6T2 1871 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 APBA3O96018 575 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 FGAP02671 866 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 HIBADHP31937 336 aaKnown RBP17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 CCDC183Q5T5S1 534 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 ZNF274Q96GC6 653 aaPredicted RBP17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 ANKRD31Q8N7Z5 1873 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 ZNF213O14771 459 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 BRIP1Q9BX63 1249 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
SPOCK3-226ENST00000541354 PCP11498 1178 aaKnown RBP17.27■□□□□ 0.36
SPOCK3-226ENST00000541354 NCOA7Q8NI08 942 aa17.27■□□□□ 0.36
SPOCK3-226ENST00000541354 NACAP1Q9BZK3 213 aa17.27■□□□□ 0.36
SPOCK3-226ENST00000541354 WWC3Q9ULE0 1092 aa17.27■□□□□ 0.36
SPOCK3-226ENST00000541354 COL1A1P02452 1464 aaPredicted RBP17.27■□□□□ 0.35
SPOCK3-226ENST00000541354 STOX1Q6ZVD7 989 aa17.27■□□□□ 0.35
SPOCK3-226ENST00000541354 VPS37DQ86XT2 251 aa17.27■□□□□ 0.35
SPOCK3-226ENST00000541354 NOL7Q9UMY1 257 aaKnown RBP17.27■□□□□ 0.35
SPOCK3-226ENST00000541354 MCM5P33992 734 aa17.26■□□□□ 0.35
SPOCK3-226ENST00000541354 CHD4Q14839 1912 aa17.26■□□□□ 0.35
SPOCK3-226ENST00000541354 PFKFB2O60825 505 aa17.26■□□□□ 0.35
SPOCK3-226ENST00000541354 MAGEB6Q8N7X4 407 aa17.26■□□□□ 0.35
SPOCK3-226ENST00000541354 GTF3C6Q969F1 213 aa17.26■□□□□ 0.35
SPOCK3-226ENST00000541354 CNNM2Q9H8M5 875 aa17.26■□□□□ 0.35
SPOCK3-226ENST00000541354 ANO8Q9HCE9 1232 aaPredicted RBP17.26■□□□□ 0.35
SPOCK3-226ENST00000541354 LRP2BPQ9P2M1 347 aa17.26■□□□□ 0.35
SPOCK3-226ENST00000541354 CHGBP05060 677 aa17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 DDR1Q08345 913 aa17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 FBXO41Q8TF61 875 aa17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 LARP6Q9BRS8 491 aaKnown RBP17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 GDPD2Q9HCC8 539 aa17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 KIF3AQ9Y496 699 aa17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 MB21D2Q8IYB1 491 aaPredicted RBP17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 WDR66Q8TBY9 1149 aa17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 TFCP2L1Q9NZI6 479 aa17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 ELP1O95163 1332 aa17.25■□□□□ 0.35
SPOCK3-226ENST00000541354 Q6ZUG5 572 aa17.24■□□□□ 0.35
SPOCK3-226ENST00000541354 ZNF804AQ7Z570 1209 aa17.24■□□□□ 0.35
SPOCK3-226ENST00000541354 ANAPC4Q9UJX5 808 aa17.24■□□□□ 0.35
SPOCK3-226ENST00000541354 GYG1P46976 350 aa17.24■□□□□ 0.35
SPOCK3-226ENST00000541354 TAF6LQ9Y6J9 622 aa17.24■□□□□ 0.35
SPOCK3-226ENST00000541354 PDE6BP35913 854 aa17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 TRDNQ13061 729 aa17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 ZNF827Q17R98 1081 aa17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 SP8Q8IXZ3 490 aa17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 TDRD7Q8NHU6 1098 aaKnown RBP17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 ZNF500O60304 480 aaPredicted RBP17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 HMGN5P82970 282 aaKnown RBP17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 RALYLQ86SE5 291 aaKnown RBP17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 TMEM87BQ96K49 555 aa17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 NPR1P16066 1061 aa17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 IFNL3Q8IZI9 196 aa17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 RNF41Q9H4P4 317 aaPredicted RBP17.23■□□□□ 0.35
SPOCK3-226ENST00000541354 MBD4O95243 580 aa17.22■□□□□ 0.35
SPOCK3-226ENST00000541354 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
SPOCK3-226ENST00000541354 COL23A1Q86Y22 540 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms