RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 GTF2IP78347 998 aa12.37□□□□□ -0.43
PABPC1P4-201ENST00000539977 NSUN4Q96CB9 384 aaKnown RBP12.37□□□□□ -0.43
PABPC1P4-201ENST00000539977 MXD3Q9BW11 206 aa12.37□□□□□ -0.43
PABPC1P4-201ENST00000539977 G3V3G9 751 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 PTGER2P43116 358 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 DIXDC1Q155Q3 683 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 DCAF8Q5TAQ9 597 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 WDR66Q8TBY9 1149 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 KCNB2Q92953 911 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 SNX21Q969T3 373 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 TCEANC2Q96MN5 208 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 ST18O60284 1047 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 LDHBP07195 334 aaKnown RBP12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 AOC3Q16853 763 aa12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 DZIP1Q86YF9 867 aaKnown RBP12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 SLKQ9H2G2 1235 aaPredicted RBP12.36□□□□□ -0.43
PABPC1P4-201ENST00000539977 PDS5AQ29RF7 1337 aaKnown RBP12.35□□□□□ -0.43
PABPC1P4-201ENST00000539977 DUOX1Q9NRD9 1551 aa12.35□□□□□ -0.43
PABPC1P4-201ENST00000539977 MFSD14BQ5SR56 506 aa12.35□□□□□ -0.43
PABPC1P4-201ENST00000539977 STOX1Q6ZVD7 989 aa12.35□□□□□ -0.43
PABPC1P4-201ENST00000539977 COA1Q9GZY4 146 aa12.35□□□□□ -0.43
PABPC1P4-201ENST00000539977 SLC4A4Q9Y6R1 1079 aa12.35□□□□□ -0.43
PABPC1P4-201ENST00000539977 SLX4Q8IY92 1834 aa12.35□□□□□ -0.43
PABPC1P4-201ENST00000539977 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 F8W031 263 aaPredicted RBP12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 K7ELQ4 463 aaPredicted RBP12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 SDR42E1Q8WUS8 393 aa12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 IL17RAQ96F46 866 aa12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 EYA3Q99504 573 aa12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 EPB41L4AQ9HCS5 686 aaPredicted RBP12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 AATFQ9NY61 560 aaKnown RBP eCLIP12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 PIM2Q9P1W9 311 aa12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 MYO5AQ9Y4I1 1855 aaKnown RBP12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 GSG1L2A8MUP6 293 aa12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 TGFB2P61812 414 aa12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 SPTY2D1Q68D10 685 aaPredicted RBP12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 STK11IPQ8N1F8 1099 aa12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 RIOK1Q9BRS2 568 aaKnown RBP12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
PABPC1P4-201ENST00000539977 LRRC37AA6NMS7 1700 aa12.33□□□□□ -0.44
PABPC1P4-201ENST00000539977 PATL2C9JE40 543 aaKnown RBP12.33□□□□□ -0.44
PABPC1P4-201ENST00000539977 IFNL3Q8IZI9 196 aa12.33□□□□□ -0.44
PABPC1P4-201ENST00000539977 ZGPATQ8N5A5 531 aaKnown RBP12.33□□□□□ -0.44
PABPC1P4-201ENST00000539977 CERS5Q8N5B7 392 aa12.33□□□□□ -0.44
PABPC1P4-201ENST00000539977 RTFDC1Q9BY42 306 aaPredicted RBP12.33□□□□□ -0.44
PABPC1P4-201ENST00000539977 INCENPQ9NQS7 918 aa12.33□□□□□ -0.44
PABPC1P4-201ENST00000539977 ZNF277Q9NRM2 450 aaPredicted RBP12.33□□□□□ -0.44
PABPC1P4-201ENST00000539977 CYP46A1Q9Y6A2 500 aa12.33□□□□□ -0.44
PABPC1P4-201ENST00000539977 SALL1Q9NSC2 1324 aa12.33□□□□□ -0.44
PABPC1P4-201ENST00000539977 LTBP1Q14766 1721 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 E7EWF7 191 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 SMIM22K7EJ46 135 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 PPIP5K2O43314 1243 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 ECE2O60344 883 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 AK2P54819 239 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 IMMTQ16891 758 aaKnown RBP12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 NLGN2Q8NFZ4 835 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 TTC14Q96N46 770 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 LRRC2Q9BYS8 371 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 PDRG1Q9NUG6 133 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 CTNNA3Q9UI47 895 aa12.32□□□□□ -0.44
PABPC1P4-201ENST00000539977 ZNF213O14771 459 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 DTNBO60941 627 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 HSP90AA1P07900 732 aaKnown RBP12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 TDO2P48775 406 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 TSGA10IPQ3SY00 556 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 DALRD3Q5D0E6 543 aaKnown RBP12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 BLOC1S2Q6QNY1 142 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 NEK1Q96PY6 1258 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 TM6SF1Q9BZW5 370 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 NBPF3Q9H094 633 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 NAPBQ9H115 298 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 RPAP1Q9BWH6 1393 aaPredicted RBP12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 SNED1Q8TER0 1413 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 FAM205AQ6ZU69 1335 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 PSMA5P28066 241 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 KIAA2012Q0VF49 1180 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 SLC4A8Q2Y0W8 1093 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 NKX2-3Q8TAU0 364 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 TMX3Q96JJ7 454 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 BCS1LQ9Y276 419 aa12.31□□□□□ -0.44
PABPC1P4-201ENST00000539977 CACNA1SQ13698 1873 aa12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 CYP2D7A0A087X1C5 515 aa12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 RPS6KB1P23443 525 aa12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 SCNN1DP51172 638 aa12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 EVX2Q03828 476 aa12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 KRT32Q14532 448 aa12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 PODNQ7Z5L7 613 aa12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 TBC1D10CQ8IV04 446 aa12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 RTKN2Q8IZC4 609 aa12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 SH3RF3Q8TEJ3 882 aaPredicted RBP12.3□□□□□ -0.44
PABPC1P4-201ENST00000539977 ZBTB22O15209 634 aa12.29□□□□□ -0.44
PABPC1P4-201ENST00000539977 GNAT2P19087 354 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms