RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 IL17RAQ96F46 866 aa14.05□□□□□ -0.16
VTN-202ENST00000539746 CNNM2Q9H8M5 875 aa14.05□□□□□ -0.16
VTN-202ENST00000539746 ATP8A2Q9NTI2 1148 aa14.05□□□□□ -0.16
VTN-202ENST00000539746 COL11A2P13942 1736 aaPredicted RBP14.04□□□□□ -0.16
VTN-202ENST00000539746 GPAA1O43292 621 aa14.04□□□□□ -0.16
VTN-202ENST00000539746 APPP05067 770 aa14.04□□□□□ -0.16
VTN-202ENST00000539746 PTGER2P43116 358 aa14.04□□□□□ -0.16
VTN-202ENST00000539746 SCARF1Q14162 830 aa14.04□□□□□ -0.16
VTN-202ENST00000539746 TSGA10IPQ3SY00 556 aa14.04□□□□□ -0.16
VTN-202ENST00000539746 FAM163AQ96GL9 167 aaPredicted RBP14.04□□□□□ -0.16
VTN-202ENST00000539746 PIH1D3Q9NQM4 214 aaKnown RBP14.04□□□□□ -0.16
VTN-202ENST00000539746 IRS2Q9Y4H2 1338 aa14.04□□□□□ -0.16
VTN-202ENST00000539746 A0A0D9SFI3 127 aa14.03□□□□□ -0.16
VTN-202ENST00000539746 PATL2C9JE40 543 aaKnown RBP14.03□□□□□ -0.16
VTN-202ENST00000539746 ZNF213O14771 459 aa14.03□□□□□ -0.16
VTN-202ENST00000539746 RIMBP2O15034 1052 aa14.03□□□□□ -0.16
VTN-202ENST00000539746 ECE2O60344 883 aa14.03□□□□□ -0.16
VTN-202ENST00000539746 PDIA4P13667 645 aaKnown RBP14.03□□□□□ -0.16
VTN-202ENST00000539746 RPS12P25398 132 aaKnown RBP14.03□□□□□ -0.16
VTN-202ENST00000539746 FAM227BQ96M60 508 aa14.03□□□□□ -0.16
VTN-202ENST00000539746 LSG1Q9H089 658 aaKnown RBP14.03□□□□□ -0.16
VTN-202ENST00000539746 NAPBQ9H115 298 aa14.03□□□□□ -0.16
VTN-202ENST00000539746 ZNRF3Q9ULT6 936 aa14.03□□□□□ -0.16
VTN-202ENST00000539746 CYP46A1Q9Y6A2 500 aa14.03□□□□□ -0.16
VTN-202ENST00000539746 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
VTN-202ENST00000539746 TDO2P48775 406 aa14.02□□□□□ -0.17
VTN-202ENST00000539746 PPP4R3BQ5MIZ7 849 aa14.02□□□□□ -0.17
VTN-202ENST00000539746 HHIPL2Q6UWX4 724 aa14.02□□□□□ -0.17
VTN-202ENST00000539746 RALYLQ86SE5 291 aaKnown RBP14.02□□□□□ -0.17
VTN-202ENST00000539746 FBXW7Q969H0 707 aa14.02□□□□□ -0.17
VTN-202ENST00000539746 SNX21Q969T3 373 aa14.02□□□□□ -0.17
VTN-202ENST00000539746 TEKT1Q969V4 418 aa14.02□□□□□ -0.17
VTN-202ENST00000539746 NSUN4Q96CB9 384 aaKnown RBP14.02□□□□□ -0.17
VTN-202ENST00000539746 IPO9Q96P70 1041 aaKnown RBP14.02□□□□□ -0.17
VTN-202ENST00000539746 PDGFDQ9GZP0 370 aaPredicted RBP14.02□□□□□ -0.17
VTN-202ENST00000539746 ANTXR1Q9H6X2 564 aa14.02□□□□□ -0.17
VTN-202ENST00000539746 TMOD2Q9NZR1 351 aa14.02□□□□□ -0.17
VTN-202ENST00000539746 ARPP21Q9UBL0 812 aaPredicted RBP14.02□□□□□ -0.17
VTN-202ENST00000539746 BCS1LQ9Y276 419 aa14.02□□□□□ -0.17
VTN-202ENST00000539746 RBM8AQ9Y5S9 174 aaKnown RBP14.02□□□□□ -0.17
VTN-202ENST00000539746 MAST2Q6P0Q8 1798 aa14.01□□□□□ -0.17
VTN-202ENST00000539746 LTBP1Q14766 1721 aa14.01□□□□□ -0.17
VTN-202ENST00000539746 MROH7-TTC4A0A0A0MT08 1334 aa14.01□□□□□ -0.17
VTN-202ENST00000539746 HSP90AA1P07900 732 aaKnown RBP14.01□□□□□ -0.17
VTN-202ENST00000539746 HSPD1P10809 573 aaKnown RBP14.01□□□□□ -0.17
VTN-202ENST00000539746 IARSP41252 1262 aaKnown RBP14.01□□□□□ -0.17
VTN-202ENST00000539746 EIF6P56537 245 aaKnown RBP14.01□□□□□ -0.17
VTN-202ENST00000539746 PPP4CP60510 307 aa14.01□□□□□ -0.17
VTN-202ENST00000539746 GTF2IP78347 998 aa14.01□□□□□ -0.17
VTN-202ENST00000539746 MECOMQ03112 1051 aa14.01□□□□□ -0.17
VTN-202ENST00000539746 SART3Q15020 963 aaKnown RBP14.01□□□□□ -0.17
VTN-202ENST00000539746 CCDC178Q5BJE1 867 aa14.01□□□□□ -0.17
VTN-202ENST00000539746 AGBL3Q8NEM8 1001 aa14.01□□□□□ -0.17
VTN-202ENST00000539746 EDC3Q96F86 508 aaKnown RBP14.01□□□□□ -0.17
VTN-202ENST00000539746 MTA3Q9BTC8 594 aa14.01□□□□□ -0.17
VTN-202ENST00000539746 SERPINA10Q9UK55 444 aa14.01□□□□□ -0.17
VTN-202ENST00000539746 IQSEC3Q9UPP2 1182 aaPredicted RBP14.01□□□□□ -0.17
VTN-202ENST00000539746 WDR19Q8NEZ3 1342 aa14□□□□□ -0.17
VTN-202ENST00000539746 TCRBV5S4A2TA0A5A2 114 aa14□□□□□ -0.17
VTN-202ENST00000539746 SOCS7O14512 581 aa14□□□□□ -0.17
VTN-202ENST00000539746 MYO1BO43795 1136 aa14□□□□□ -0.17
VTN-202ENST00000539746 MBD4O95243 580 aa14□□□□□ -0.17
VTN-202ENST00000539746 KCNA3P22001 575 aa14□□□□□ -0.17
VTN-202ENST00000539746 FGD1P98174 961 aa14□□□□□ -0.17
VTN-202ENST00000539746 PI16Q6UXB8 463 aa14□□□□□ -0.17
VTN-202ENST00000539746 KCNB2Q92953 911 aa14□□□□□ -0.17
VTN-202ENST00000539746 OSBP2Q969R2 916 aa14□□□□□ -0.17
VTN-202ENST00000539746 STRBPQ96SI9 672 aaKnown RBP14□□□□□ -0.17
VTN-202ENST00000539746 KRT23Q9C075 422 aa14□□□□□ -0.17
VTN-202ENST00000539746 SLC4A4Q9Y6R1 1079 aa14□□□□□ -0.17
VTN-202ENST00000539746 ZC3H4Q9UPT8 1303 aaKnown RBP13.99□□□□□ -0.17
VTN-202ENST00000539746 SNAP23O00161 211 aa13.99□□□□□ -0.17
VTN-202ENST00000539746 GRIN3BO60391 1043 aa13.99□□□□□ -0.17
VTN-202ENST00000539746 SEC24BO95487 1268 aa13.99□□□□□ -0.17
VTN-202ENST00000539746 NECTIN1Q15223 517 aa13.99□□□□□ -0.17
VTN-202ENST00000539746 CREB3L3Q68CJ9 461 aa13.99□□□□□ -0.17
VTN-202ENST00000539746 BLOC1S2Q6QNY1 142 aa13.99□□□□□ -0.17
VTN-202ENST00000539746 ZSCAN31Q96LW9 406 aaPredicted RBP13.99□□□□□ -0.17
VTN-202ENST00000539746 MYH13Q9UKX3 1938 aa13.99□□□□□ -0.17
VTN-202ENST00000539746 DOCK2Q92608 1830 aa13.99□□□□□ -0.17
VTN-202ENST00000539746 KLRK1P26718 216 aa13.98□□□□□ -0.17
VTN-202ENST00000539746 USP5P45974 858 aa13.98□□□□□ -0.17
VTN-202ENST00000539746 PDE4BQ07343 736 aa13.98□□□□□ -0.17
VTN-202ENST00000539746 AOC3Q16853 763 aa13.98□□□□□ -0.17
VTN-202ENST00000539746 TXNRD3Q86VQ6 643 aa13.98□□□□□ -0.17
VTN-202ENST00000539746 NCOA7Q8NI08 942 aa13.98□□□□□ -0.17
VTN-202ENST00000539746 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
VTN-202ENST00000539746 WWC3Q9ULE0 1092 aa13.98□□□□□ -0.17
VTN-202ENST00000539746 TTF2Q9UNY4 1162 aaKnown RBP13.98□□□□□ -0.17
VTN-202ENST00000539746 NDUFB9Q9Y6M9 179 aa13.98□□□□□ -0.17
VTN-202ENST00000539746 AKAP11Q9UKA4 1901 aa13.98□□□□□ -0.17
VTN-202ENST00000539746 GAKO14976 1311 aa13.97□□□□□ -0.17
VTN-202ENST00000539746 GPR75-ASB3A0A0A6YYF3 556 aa13.97□□□□□ -0.17
VTN-202ENST00000539746 ERICH2A1L162 156 aa13.97□□□□□ -0.17
VTN-202ENST00000539746 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
VTN-202ENST00000539746 LMNB1P20700 586 aa13.97□□□□□ -0.17
VTN-202ENST00000539746 VPS53Q5VIR6 699 aa13.97□□□□□ -0.17
VTN-202ENST00000539746 CIAPIN1Q6FI81 312 aa13.97□□□□□ -0.17
VTN-202ENST00000539746 TMTC2Q8N394 836 aa13.97□□□□□ -0.17
VTN-202ENST00000539746 NEK1Q96PY6 1258 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms