RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 UBXN1Q04323 297 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 DHX37Q8IY37 1157 aaKnown RBP7.32□□□□□ -1.24
LSAMP-207ENST00000539563 FRMD4BQ9Y2L6 1034 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 CCDC42Q96M95 316 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 RPS6KB1P23443 525 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 POLD1P28340 1107 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 PLS1Q14651 629 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 PUM3Q15397 648 aaKnown RBP7.32□□□□□ -1.24
LSAMP-207ENST00000539563 KRT222Q8N1A0 295 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 ANKS4BQ8N8V4 417 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 C8orf37Q96NL8 207 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 DNAJC25Q9H1X3 360 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 TSPOAP1O95153 1857 aa7.32□□□□□ -1.24
LSAMP-207ENST00000539563 PTPDC1A2A3K4 754 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 UBAP1LF5GYI3 381 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 MAP3K9P80192 1104 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 TRIM14Q14142 442 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 GSTA5Q7RTV2 222 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 DNAI1Q9UI46 699 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 CCDC14Q49A88 953 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 IQSEC3Q9UPP2 1182 aaPredicted RBP7.31□□□□□ -1.24
LSAMP-207ENST00000539563 SBNO1A3KN83 1393 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 ABCC2Q92887 1545 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 ZMYM3Q14202 1370 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 NPC1L1Q9UHC9 1359 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 PDE8AO60658 829 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 PLCD1P51178 756 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 SV2BQ7L1I2 683 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 TCHPQ9BT92 498 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 METTL22Q9BUU2 404 aaPredicted RBP7.31□□□□□ -1.24
LSAMP-207ENST00000539563 MAST3O60307 1309 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 DKC1O60832 514 aaKnown RBP eCLIP7.31□□□□□ -1.24
LSAMP-207ENST00000539563 EPB41P11171 864 aaKnown RBP7.31□□□□□ -1.24
LSAMP-207ENST00000539563 PTGS1P23219 599 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 VWA3BQ502W6 1294 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 EYA1Q99502 592 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 PTPRKQ15262 1439 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 SLU7O95391 586 aaKnown RBP7.31□□□□□ -1.24
LSAMP-207ENST00000539563 SPATA24Q86W54 205 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 KIFAP3Q92845 792 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 TRAPPC3LQ5T215 181 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 CCDC186Q7Z3E2 898 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 TTC14Q96N46 770 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 ARHGEF10LQ9HCE6 1279 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 CNGA4Q8IV77 575 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 USP26Q9BXU7 913 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 MTUS1Q9ULD2 1270 aa7.31□□□□□ -1.24
LSAMP-207ENST00000539563 NSFL1CQ9UNZ2 370 aaKnown RBP7.31□□□□□ -1.24
LSAMP-207ENST00000539563 GAS8O95995 478 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 ATP2A2P16615 1042 aaKnown RBP7.3□□□□□ -1.24
LSAMP-207ENST00000539563 HSPA4P34932 840 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 TUBB2AQ13885 445 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 NBPF14Q5TI25 921 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 ZNF354CQ86Y25 554 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 JDP2Q8WYK2 163 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 TUBB2BQ9BVA1 445 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 DEXIO95424 95 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 CNNM4Q6P4Q7 775 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 VEZTQ9HBM0 779 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 WDR66Q8TBY9 1149 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 TBX22Q9Y458 520 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 LMOD1P29536 600 aaPredicted RBP7.3□□□□□ -1.24
LSAMP-207ENST00000539563 PPP2R5BQ15173 497 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 CWF19L2Q2TBE0 894 aaKnown RBP7.3□□□□□ -1.24
LSAMP-207ENST00000539563 C8orf34Q49A92 452 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 KIAA1524Q8TCG1 905 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 NAP1L3Q99457 506 aaPredicted RBP7.3□□□□□ -1.24
LSAMP-207ENST00000539563 MAK16Q9BXY0 300 aaKnown RBP7.3□□□□□ -1.24
LSAMP-207ENST00000539563 ZSWIM4Q9H7M6 989 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 KIF24Q5T7B8 1368 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 TMEM110-MUSTN1A8MSY1 372 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 CHST3Q7LGC8 479 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 MIGA1Q8NAN2 632 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 APPBP2Q92624 585 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 VTI1AQ96AJ9 217 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 ATP10AO60312 1499 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 ZNF790Q6PG37 636 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 TCEANC2Q96MN5 208 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 CSRNP2Q9H175 543 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 TFCP2L1Q9NZI6 479 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 ZKSCAN5Q9Y2L8 839 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 ZBTB7BO15156 539 aaPredicted RBP7.3□□□□□ -1.24
LSAMP-207ENST00000539563 CALUO43852 315 aaPredicted RBP7.3□□□□□ -1.24
LSAMP-207ENST00000539563 PPFIA3O75145 1194 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 EEF2P13639 858 aaKnown RBP7.3□□□□□ -1.24
LSAMP-207ENST00000539563 GTF2F1P35269 517 aaKnown RBP eCLIP7.3□□□□□ -1.24
LSAMP-207ENST00000539563 RILPL1Q5EBL4 403 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 NUP58Q9BVL2 599 aa7.3□□□□□ -1.24
LSAMP-207ENST00000539563 MTRF1LQ9UGC7 380 aaKnown RBP7.3□□□□□ -1.24
LSAMP-207ENST00000539563 SHROOM2Q13796 1616 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 PKNOX2Q96KN3 472 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 PAIP2Q9BPZ3 127 aaKnown RBP7.29□□□□□ -1.24
LSAMP-207ENST00000539563 LZTS2Q9BRK4 669 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 TXNDC16Q9P2K2 825 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 LUC7L2Q9Y383 392 aaKnown RBP7.29□□□□□ -1.24
LSAMP-207ENST00000539563 AKR1B15C9JRZ8 316 aaPredicted RBP7.29□□□□□ -1.24
LSAMP-207ENST00000539563 MRPS9P82933 396 aaKnown RBP7.29□□□□□ -1.24
LSAMP-207ENST00000539563 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.29□□□□□ -1.24
LSAMP-207ENST00000539563 TEX11Q8IYF3 940 aa7.29□□□□□ -1.24
LSAMP-207ENST00000539563 CCDC26Q8TAB7 109 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms