RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SNRPBP14678 240 aaKnown RBP1.61□□□□□ -2.15
HIF1A-204ENST00000539097 GARTP22102 1010 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 MSX1P28360 303 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 MPP2Q14168 576 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 MAP3K11Q16584 847 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 KRT26Q7Z3Y9 468 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 SSH1Q8WYL5 1049 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 EAF1Q96JC9 268 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-204ENST00000539097 LGR4Q9BXB1 951 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 GSX2Q9BZM3 304 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 ANTXR1Q9H6X2 564 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 ZNF408Q9H9D4 720 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 GOLGA2P5Q9HBQ8 144 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 BRD7Q9NPI1 651 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 PRKAG2Q9UGJ0 569 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 PPT2Q9UMR5 302 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 TMEM238LA0A1B0GVL6 79 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 TTC24A2A3L6 582 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-204ENST00000539097 SPDYE3A6NKU9 549 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 XYLBO75191 536 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 BMP2P12643 396 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 CAP1Q01518 475 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 PAK2Q13177 524 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 PSMD2Q13200 908 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 SERINC3Q13530 473 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 CCDC144BQ3MJ40 725 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 PLEKHG4Q58EX7 1191 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 ARSJQ5FYB0 599 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-204ENST00000539097 TMEM214Q6NUQ4 689 aaKnown RBP1.61□□□□□ -2.15
HIF1A-204ENST00000539097 Q6ZS46 218 aa1.61□□□□□ -2.15
HIF1A-204ENST00000539097 ST13P5Q8NFI4 369 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-204ENST00000539097 ENOX1Q8TC92 643 aaKnown RBP1.61□□□□□ -2.15
HIF1A-204ENST00000539097 MRPL42Q9Y6G3 142 aaKnown RBP1.61□□□□□ -2.15
HIF1A-204ENST00000539097 TLDC2A0PJX2 215 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 TTLL8A6PVC2 850 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 CTSBP07858 339 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 NME2P22392 152 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 ZNF76P36508 570 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 PTSQ03393 145 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 SLC27A3Q5K4L6 730 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 C11orf96Q7Z7L8 435 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 RHPN1Q8TCX5 695 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 SLC26A8Q96RN1 970 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 TNKS2Q9H2K2 1166 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 CAPN10Q9HC96 672 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 AAASQ9NRG9 546 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 ADGRE2Q9UHX3 823 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 PCDHB5Q9Y5E4 795 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 A0A1W2PP55 124 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 DLGAP3O95886 979 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 CAPNS1P04632 268 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 VCAM1P19320 739 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 TNP2Q05952 138 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 PPP2R3AQ06190 1150 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 RNFT1Q5M7Z0 435 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 TXNDC11Q6PKC3 985 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 BNC2Q6ZN30 1099 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 C8orf86Q6ZUL3 223 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 USP48Q86UV5 1035 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 GRIN3AQ8TCU5 1115 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 RHOVQ96L33 236 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 SRRTQ9BXP5 876 aaKnown RBP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 UBAP1LF5GYI3 381 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 U2AF1L5P0DN76 240 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 SLURP2P0DP57 97 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 MAPTP10636 758 aaKnown RBP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 ATF4P18848 351 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 GTF2F1P35269 517 aaKnown RBP eCLIP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 U2AF1Q01081 240 aaKnown RBP eCLIP1.6□□□□□ -2.153e-6■■■■□ 23.3
HIF1A-204ENST00000539097 CTBSQ01459 385 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 XPCQ01831 940 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 MAP7Q14244 749 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 GAS6Q14393 721 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 TCEAL1Q15170 157 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 TPTE2Q6XPS3 522 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 RUFY4Q6ZNE9 571 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 ZNF438Q7Z4V0 828 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 RELL1Q8IUW5 271 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 GPR161Q8N6U8 529 aaKnown RBP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 GAS2L1Q99501 681 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 PDZRN3Q9UPQ7 1066 aa1.6□□□□□ -2.15
HIF1A-204ENST00000539097 EPB41L3Q9Y2J2 1087 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-204ENST00000539097 MINDY4BA8MYZ0 360 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 K7ESF4 209 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 TFE3P19532 575 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 POU3F2P20265 443 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 KRT76Q01546 638 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 NCAPHQ15003 741 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 EFHC2Q5JST6 749 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 AGMOQ6ZNB7 445 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 HS2ST1Q7LGA3 356 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 PGBD3Q8N328 593 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 GOLGA6L1Q8N7Z2 621 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 WDR89Q96FK6 387 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-204ENST00000539097 CCDC120Q96HB5 630 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 TANGO6Q9C0B7 1094 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 RBSNQ9H1K0 784 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 NEUROD4Q9HD90 331 aa1.59□□□□□ -2.15
HIF1A-204ENST00000539097 GGT7Q9UJ14 662 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms