RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 REXO1L1PQ8IX06 675 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 PI4KAP1Q8N8J0 262 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 NFATC2IPQ8NCF5 419 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 KCNG4Q8TDN1 519 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 SYTL4Q96C24 671 aaPredicted RBP10.38□□□□□ -0.75
SNHG1-209ENST00000538654 EYA1Q99502 592 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 ACEP12821 1306 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 RPS6KA5O75582 802 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 RAPGEF3O95398 923 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 GTF2A1P52655 376 aaPredicted RBP10.38□□□□□ -0.75
SNHG1-209ENST00000538654 ICE2Q659A1 982 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 NSUN7Q8NE18 718 aaKnown RBP10.38□□□□□ -0.75
SNHG1-209ENST00000538654 CCDC34Q96HJ3 373 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 ZCCHC17Q9NP64 241 aaKnown RBP10.38□□□□□ -0.75
SNHG1-209ENST00000538654 ATG3Q9NT62 314 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
SNHG1-209ENST00000538654 PCDHA7Q9UN72 937 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 TXLNAP40222 546 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
SNHG1-209ENST00000538654 FBXO31Q5XUX0 539 aaPredicted RBP10.37□□□□□ -0.75
SNHG1-209ENST00000538654 IL17REQ8NFR9 667 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 HNRNPLLQ8WVV9 542 aaKnown RBP10.37□□□□□ -0.75
SNHG1-209ENST00000538654 SLC26A8Q96RN1 970 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 PARD6BQ9BYG5 372 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 MKRN1Q9UHC7 482 aaKnown RBP10.37□□□□□ -0.75
SNHG1-209ENST00000538654 MRFAP1Q9Y605 127 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 PTPDC1A2A3K4 754 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 YEATS4O95619 227 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 MAGEA9P43362 315 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 AMPHP49418 695 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 COL9A3Q14050 684 aaPredicted RBP10.37□□□□□ -0.75
SNHG1-209ENST00000538654 GIPC2Q8TF65 315 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 UTP14AQ9BVJ6 771 aaKnown RBP10.37□□□□□ -0.75
SNHG1-209ENST00000538654 PLEKHG2Q9H7P9 1386 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 TSPOAP1O95153 1857 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 NCAPD2Q15021 1401 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 METP08581 1390 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.37□□□□□ -0.75
SNHG1-209ENST00000538654 MAP2K7O14733 419 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 ERLIN1O75477 346 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 TOP1P11387 765 aaKnown RBP10.37□□□□□ -0.75
SNHG1-209ENST00000538654 UBASH3AP57075 661 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 NCAPHQ15003 741 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 LONRF2Q1L5Z9 754 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 PPP2R2CQ9Y2T4 447 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 TAF6LQ9Y6J9 622 aa10.37□□□□□ -0.75
SNHG1-209ENST00000538654 A0A087WWV3 80 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 SERPINC1P01008 464 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 NDUFA8P51970 172 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 RHBDL3P58872 404 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 GNG11P61952 73 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 TUBB2AQ13885 445 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 STK38Q15208 465 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 TTC31Q49AM3 519 aaPredicted RBP10.36□□□□□ -0.75
SNHG1-209ENST00000538654 HDXQ7Z353 690 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 PARP9Q8IXQ6 854 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 MORC4Q8TE76 937 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 EAF2Q96CJ1 260 aaPredicted RBP10.36□□□□□ -0.75
SNHG1-209ENST00000538654 TUBB2BQ9BVA1 445 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 FTOQ9C0B1 505 aaKnown RBP eCLIP10.36□□□□□ -0.75
SNHG1-209ENST00000538654 A0A1B0GVL5 298 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 VWA3AA6NCI4 1184 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 LONRF3Q496Y0 759 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 DHX32Q7L7V1 743 aaKnown RBP10.36□□□□□ -0.75
SNHG1-209ENST00000538654 ZNF589Q86UQ0 364 aaPredicted RBP10.36□□□□□ -0.75
SNHG1-209ENST00000538654 VSTM4Q8IW00 320 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 FMNL2Q96PY5 1086 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 BOLA2Q9H3K6 86 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 CHPF2Q9P2E5 772 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 LCMT1Q9UIC8 334 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 PTPRUQ92729 1446 aa10.36□□□□□ -0.75
SNHG1-209ENST00000538654 STX10O60499 249 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 EIF2S2P20042 333 aaKnown RBP10.35□□□□□ -0.75
SNHG1-209ENST00000538654 LMOD1P29536 600 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-209ENST00000538654 HDGFP51858 240 aaKnown RBP10.35□□□□□ -0.75
SNHG1-209ENST00000538654 MYL5Q02045 173 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 CFAP100Q494V2 611 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 HELBQ8NG08 1087 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-209ENST00000538654 POLR3EQ9NVU0 708 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 MED1Q15648 1581 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-209ENST00000538654 SASH1O94885 1247 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 TUBBP07437 444 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 LINC00301Q8NCQ3 95 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 PPM1EQ8WY54 764 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 ERCC4Q92889 916 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-209ENST00000538654 ACBD3Q9H3P7 528 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 PA2G4Q9UQ80 394 aaKnown RBP10.35□□□□□ -0.75
SNHG1-209ENST00000538654 SALL1Q9NSC2 1324 aa10.35□□□□□ -0.75
SNHG1-209ENST00000538654 KDM3BQ7LBC6 1761 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 ZNF202O95125 648 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 APOBRQ0VD83 1088 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 GET4Q7L5D6 327 aaPredicted RBP10.34□□□□□ -0.75
SNHG1-209ENST00000538654 BRAPQ7Z569 592 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 ARHGEF1Q92888 912 aaKnown RBP10.34□□□□□ -0.75
SNHG1-209ENST00000538654 CCDC8Q9H0W5 538 aaPredicted RBP10.34□□□□□ -0.75
SNHG1-209ENST00000538654 LAMA4Q16363 1823 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 SLIT1O75093 1534 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 DIP2AQ14689 1571 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 MRC1P22897 1456 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms