RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
ACTN1-205ENST00000538545 UBE4AQ14139 1066 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 ZSCAN25Q6NSZ9 544 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 GAS2L3Q86XJ1 694 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 ANKIB1Q9P2G1 1089 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 MTMR6Q9Y217 621 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 ZSCAN22P10073 491 aaPredicted RBP16.73■□□□□ 0.27
ACTN1-205ENST00000538545 ANTXR2P58335 489 aa16.73■□□□□ 0.27
ACTN1-205ENST00000538545 RBM6P78332 1123 aaKnown RBP16.73■□□□□ 0.27
ACTN1-205ENST00000538545 MSL1Q68DK7 614 aa16.73■□□□□ 0.27
ACTN1-205ENST00000538545 SENP2Q9HC62 589 aa16.73■□□□□ 0.27
ACTN1-205ENST00000538545 WDR33Q9C0J8 1336 aaKnown RBP16.73■□□□□ 0.27
ACTN1-205ENST00000538545 RXRAP19793 462 aa16.73■□□□□ 0.27
ACTN1-205ENST00000538545 CYP7A1P22680 504 aa16.73■□□□□ 0.27
ACTN1-205ENST00000538545 DYNLL1P63167 89 aaKnown RBP16.73■□□□□ 0.27
ACTN1-205ENST00000538545 EVX2Q03828 476 aa16.73■□□□□ 0.27
ACTN1-205ENST00000538545 ANKRD1Q15327 319 aa16.73■□□□□ 0.27
ACTN1-205ENST00000538545 CAVIN4Q5BKX8 364 aa16.73■□□□□ 0.27
ACTN1-205ENST00000538545 LARP1BQ659C4 914 aaKnown RBP16.73■□□□□ 0.27
ACTN1-205ENST00000538545 GTF3C6Q969F1 213 aa16.73■□□□□ 0.27
ACTN1-205ENST00000538545 KDM4AO75164 1064 aa16.72■□□□□ 0.27
ACTN1-205ENST00000538545 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
ACTN1-205ENST00000538545 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
ACTN1-205ENST00000538545 ZNF804BA4D1E1 1349 aa16.72■□□□□ 0.27
ACTN1-205ENST00000538545 B4E1Z4 1266 aa16.72■□□□□ 0.27
ACTN1-205ENST00000538545 PRDX5P30044 214 aa16.72■□□□□ 0.27
ACTN1-205ENST00000538545 FIBPO43427 364 aa16.71■□□□□ 0.27
ACTN1-205ENST00000538545 PRC1O43663 620 aa16.71■□□□□ 0.27
ACTN1-205ENST00000538545 F13A1P00488 732 aa16.71■□□□□ 0.27
ACTN1-205ENST00000538545 CYB5R4Q7L1T6 521 aa16.71■□□□□ 0.27
ACTN1-205ENST00000538545 IFNL3Q8IZI9 196 aa16.71■□□□□ 0.27
ACTN1-205ENST00000538545 GSG1L2A8MUP6 293 aa16.71■□□□□ 0.27
ACTN1-205ENST00000538545 CTDNEP1O95476 244 aa16.71■□□□□ 0.27
ACTN1-205ENST00000538545 DNM1Q05193 864 aaKnown RBP16.71■□□□□ 0.27
ACTN1-205ENST00000538545 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
ACTN1-205ENST00000538545 SLC4A4Q9Y6R1 1079 aa16.71■□□□□ 0.27
ACTN1-205ENST00000538545 NEDD4P46934 1319 aa16.71■□□□□ 0.27
ACTN1-205ENST00000538545 USP48Q86UV5 1035 aa16.7■□□□□ 0.26
ACTN1-205ENST00000538545 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
ACTN1-205ENST00000538545 MB21D2Q8IYB1 491 aaPredicted RBP16.7■□□□□ 0.26
ACTN1-205ENST00000538545 CTNNA3Q9UI47 895 aa16.7■□□□□ 0.26
ACTN1-205ENST00000538545 CYP2D7A0A087X1C5 515 aa16.7■□□□□ 0.26
ACTN1-205ENST00000538545 RRP12Q5JTH9 1297 aaKnown RBP16.7■□□□□ 0.26
ACTN1-205ENST00000538545 SLC27A3Q5K4L6 730 aa16.7■□□□□ 0.26
ACTN1-205ENST00000538545 PANK2Q9BZ23 570 aa16.7■□□□□ 0.26
ACTN1-205ENST00000538545 DOCK2Q92608 1830 aa16.7■□□□□ 0.26
ACTN1-205ENST00000538545 MYH13Q9UKX3 1938 aa16.7■□□□□ 0.26
ACTN1-205ENST00000538545 GUCY1B3Q02153 619 aa16.69■□□□□ 0.26
ACTN1-205ENST00000538545 ZKSCAN3Q9BRR0 538 aa16.69■□□□□ 0.26
ACTN1-205ENST00000538545 NAPBQ9H115 298 aa16.69■□□□□ 0.26
ACTN1-205ENST00000538545 PDIA3P30101 505 aaKnown RBP16.69■□□□□ 0.26
ACTN1-205ENST00000538545 HIBADHP31937 336 aaKnown RBP16.69■□□□□ 0.26
ACTN1-205ENST00000538545 GRIK5Q16478 980 aa16.69■□□□□ 0.26
ACTN1-205ENST00000538545 FBXO33Q7Z6M2 555 aa16.69■□□□□ 0.26
ACTN1-205ENST00000538545 RALYLQ86SE5 291 aaKnown RBP16.69■□□□□ 0.26
ACTN1-205ENST00000538545 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
ACTN1-205ENST00000538545 RPGRQ92834 1020 aaKnown RBP16.69■□□□□ 0.26
ACTN1-205ENST00000538545 ALDH8A1Q9H2A2 487 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-205ENST00000538545 TOMM22Q9NS69 142 aa16.69■□□□□ 0.26
ACTN1-205ENST00000538545 GRAPQ13588 217 aa16.69■□□□□ 0.26
ACTN1-205ENST00000538545 GRAPLQ8TC17 118 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-205ENST00000538545 MYL10Q9BUA6 226 aa16.69■□□□□ 0.26
ACTN1-205ENST00000538545 GJB4Q9NTQ9 266 aa16.69■□□□□ 0.26
ACTN1-205ENST00000538545 PATL2C9JE40 543 aaKnown RBP16.68■□□□□ 0.26
ACTN1-205ENST00000538545 POLRMTO00411 1230 aaKnown RBP16.68■□□□□ 0.26
ACTN1-205ENST00000538545 HMGB1P09429 215 aaKnown RBP16.68■□□□□ 0.26
ACTN1-205ENST00000538545 TDO2P48775 406 aa16.68■□□□□ 0.26
ACTN1-205ENST00000538545 KLHL40Q2TBA0 621 aa16.68■□□□□ 0.26
ACTN1-205ENST00000538545 NCOA7Q8NI08 942 aa16.68■□□□□ 0.26
ACTN1-205ENST00000538545 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
ACTN1-205ENST00000538545 BAZ2AQ9UIF9 1905 aaKnown RBP16.68■□□□□ 0.26
ACTN1-205ENST00000538545 MINDY4BA8MYZ0 360 aa16.68■□□□□ 0.26
ACTN1-205ENST00000538545 ADRA2BP18089 450 aa16.68■□□□□ 0.26
ACTN1-205ENST00000538545 ZNF772Q68DY9 489 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-205ENST00000538545 TMEM63CQ9P1W3 806 aa16.68■□□□□ 0.26
ACTN1-205ENST00000538545 RGS17Q9UGC6 210 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-205ENST00000538545 KLF18A0A0U1RQI7 1052 aa16.67■□□□□ 0.26
ACTN1-205ENST00000538545 GPSM2P81274 684 aa16.67■□□□□ 0.26
ACTN1-205ENST00000538545 NSUN7Q8NE18 718 aaKnown RBP16.67■□□□□ 0.26
ACTN1-205ENST00000538545 RXRBP28702 533 aa16.67■□□□□ 0.26
ACTN1-205ENST00000538545 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
ACTN1-205ENST00000538545 POTEAQ6S8J7 498 aa16.67■□□□□ 0.26
ACTN1-205ENST00000538545 AGXT2Q9BYV1 514 aa16.67■□□□□ 0.26
ACTN1-205ENST00000538545 AATFQ9NY61 560 aaKnown RBP eCLIP16.67■□□□□ 0.26
ACTN1-205ENST00000538545 TFIP11Q9UBB9 837 aaKnown RBP16.67■□□□□ 0.26
ACTN1-205ENST00000538545 PFKFB2O60825 505 aa16.66■□□□□ 0.26
ACTN1-205ENST00000538545 MCM5P33992 734 aa16.66■□□□□ 0.26
ACTN1-205ENST00000538545 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
ACTN1-205ENST00000538545 MECOMQ03112 1051 aa16.66■□□□□ 0.26
ACTN1-205ENST00000538545 CACNA1SQ13698 1873 aa16.66■□□□□ 0.26
ACTN1-205ENST00000538545 GOLGA6L3A6NEY3 463 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 RGL2O15211 777 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 ST5P78524 1137 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 NAA16Q6N069 864 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-205ENST00000538545 TICAM2Q86XR7 235 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 MAGEB6P1A0A0J9YX57 407 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 UBE2Q2LH0YL09 131 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 PRDM1O75626 825 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 SKOR2Q2VWA4 1001 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms