RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SLC3A2P08195 630 aaKnown RBP8.6□□□□□ -1.03
MSH6-209ENST00000538136 OTUD5Q96G74 571 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.6□□□□□ -1.03
MSH6-209ENST00000538136 USP32Q8NFA0 1604 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 MROH5Q6ZUA9 1318 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 VEGFAP15692 232 aaPredicted RBP8.6□□□□□ -1.03
MSH6-209ENST00000538136 PDE4AP27815 886 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 TM4SF1P30408 202 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 KIF4BQ2VIQ3 1234 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 PIK3C2AO00443 1686 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 ADM5C9JUS6 153 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 TSPY3P0CV98 308 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 TSPY8P0CW00 308 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 ZSCAN25Q6NSZ9 544 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 SLF2Q8IX21 1173 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 VTI1AQ96AJ9 217 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 MYL10Q9BUA6 226 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 TMEM39BQ9GZU3 492 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 PICK1Q9NRD5 415 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 CD2APQ9Y5K6 639 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 CSADQ9Y600 493 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 KDM2BQ8NHM5 1336 aa8.6□□□□□ -1.03
MSH6-209ENST00000538136 IFIT3O14879 490 aaKnown RBP8.59□□□□□ -1.03
MSH6-209ENST00000538136 CDC45O75419 566 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 TGFB2P61812 414 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 SOGA3Q5TF21 947 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 SP8Q8IXZ3 490 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 FAM184AQ8NB25 1140 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 KAZALD1Q96I82 304 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 TANGO6Q9C0B7 1094 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 ASTN2O75129 1339 aaPredicted RBP8.59□□□□□ -1.03
MSH6-209ENST00000538136 VPS37CA5D8V6 355 aaPredicted RBP8.59□□□□□ -1.03
MSH6-209ENST00000538136 WDHD1O75717 1129 aaPredicted RBP8.59□□□□□ -1.03
MSH6-209ENST00000538136 MCAMP43121 646 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 DCTPP1Q9H773 170 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 TCEAL9Q9UHQ7 104 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 LEMD3Q9Y2U8 911 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 GPAA1O43292 621 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 EPHX2P34913 555 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 TNNI2P48788 182 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 UBE4AQ14139 1066 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 RASA3Q14644 834 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 CMTR1Q8N1G2 835 aaKnown RBP8.59□□□□□ -1.03
MSH6-209ENST00000538136 GPCPD1Q9NPB8 672 aa8.59□□□□□ -1.03
MSH6-209ENST00000538136 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.59□□□□□ -1.03
MSH6-209ENST00000538136 REC8O95072 547 aa8.59□□□□□ -1.04
MSH6-209ENST00000538136 CYP2D6P10635 497 aa8.59□□□□□ -1.04
MSH6-209ENST00000538136 RNF20Q5VTR2 975 aa8.59□□□□□ -1.04
MSH6-209ENST00000538136 CREBRFQ8IUR6 639 aa8.59□□□□□ -1.04
MSH6-209ENST00000538136 ZFP91Q96JP5 570 aaPredicted RBP8.59□□□□□ -1.04
MSH6-209ENST00000538136 PRMT6Q96LA8 375 aaPredicted RBP8.59□□□□□ -1.04
MSH6-209ENST00000538136 WRNIP1Q96S55 665 aa8.59□□□□□ -1.04
MSH6-209ENST00000538136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.59□□□□□ -1.04
MSH6-209ENST00000538136 PIH1D3Q9NQM4 214 aaKnown RBP8.59□□□□□ -1.04
MSH6-209ENST00000538136 HACL1Q9UJ83 578 aa8.59□□□□□ -1.04
MSH6-209ENST00000538136 MECOMQ03112 1051 aa8.58□□□□□ -1.04
MSH6-209ENST00000538136 SLC10A4Q96EP9 437 aa8.58□□□□□ -1.04
MSH6-209ENST00000538136 CRKP46108 304 aa8.58□□□□□ -1.04
MSH6-209ENST00000538136 GRIK5Q16478 980 aa8.58□□□□□ -1.04
MSH6-209ENST00000538136 IMMTQ16891 758 aaKnown RBP8.58□□□□□ -1.04
MSH6-209ENST00000538136 HSCBQ8IWL3 235 aa8.58□□□□□ -1.04
MSH6-209ENST00000538136 PKD2L1Q9P0L9 805 aa8.58□□□□□ -1.04
MSH6-209ENST00000538136 PDE6AP16499 860 aa8.58□□□□□ -1.04
MSH6-209ENST00000538136 CASTP20810 708 aaKnown RBP8.58□□□□□ -1.04
MSH6-209ENST00000538136 ZNF157P51786 506 aaPredicted RBP8.58□□□□□ -1.04
MSH6-209ENST00000538136 SNAP25P60880 206 aa8.58□□□□□ -1.04
MSH6-209ENST00000538136 LRRC47Q8N1G4 583 aaKnown RBP8.58□□□□□ -1.04
MSH6-209ENST00000538136 SSH3Q8TE77 659 aa8.58□□□□□ -1.04
MSH6-209ENST00000538136 B4E1Z4 1266 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 EGFRP00533 1210 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 SART3Q15020 963 aaKnown RBP8.57□□□□□ -1.04
MSH6-209ENST00000538136 NFAT5O94916 1531 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 COL16A1Q07092 1604 aaPredicted RBP8.57□□□□□ -1.04
MSH6-209ENST00000538136 GOLGA8HP0CJ92 632 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 ZGPATQ8N5A5 531 aaKnown RBP8.57□□□□□ -1.04
MSH6-209ENST00000538136 ELP3Q9H9T3 547 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 COPRSQ9NQ92 184 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 CCDC69A6NI79 296 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 PLCB2Q00722 1185 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 NFIAQ12857 509 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 TTF1Q15361 905 aaPredicted RBP8.57□□□□□ -1.04
MSH6-209ENST00000538136 SF3B3Q15393 1217 aaKnown RBP8.57□□□□□ -1.04
MSH6-209ENST00000538136 MFSD6Q6ZSS7 791 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 PODNQ7Z5L7 613 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 CRAMP1Q96RY5 1269 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 COA1Q9GZY4 146 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 CPVLQ9H3G5 476 aa8.57□□□□□ -1.04
MSH6-209ENST00000538136 H3BQV1 296 aa8.56□□□□□ -1.04
MSH6-209ENST00000538136 GSTO1P78417 241 aa8.56□□□□□ -1.04
MSH6-209ENST00000538136 NCAPD2Q15021 1401 aa8.56□□□□□ -1.04
MSH6-209ENST00000538136 IFFO2Q5TF58 517 aa8.56□□□□□ -1.04
MSH6-209ENST00000538136 ZKSCAN4Q969J2 545 aaPredicted RBP8.56□□□□□ -1.04
MSH6-209ENST00000538136 ZHX2Q9Y6X8 837 aa8.56□□□□□ -1.04
MSH6-209ENST00000538136 CNGA1P29973 690 aa8.56□□□□□ -1.04
MSH6-209ENST00000538136 PLEKHM2Q8IWE5 1019 aa8.56□□□□□ -1.04
MSH6-209ENST00000538136 SH3RF3Q8TEJ3 882 aaPredicted RBP8.56□□□□□ -1.04
MSH6-209ENST00000538136 EVI5LQ96CN4 794 aa8.56□□□□□ -1.04
MSH6-209ENST00000538136 CLIP2Q9UDT6 1046 aa8.56□□□□□ -1.04
MSH6-209ENST00000538136 RIPOR2Q9Y4F9 1068 aa8.56□□□□□ -1.04
MSH6-209ENST00000538136 IQCA1LA6NCM1 817 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms