RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 IL6STP40189 918 aaPredicted RBP7.68□□□□□ -1.18
DDB1-210ENST00000538129 TRIM50Q86XT4 487 aa7.68□□□□□ -1.18
DDB1-210ENST00000538129 CCDC85AQ96PX6 553 aaPredicted RBP7.68□□□□□ -1.18
DDB1-210ENST00000538129 CHMP4AQ9BY43 222 aa7.68□□□□□ -1.18
DDB1-210ENST00000538129 PDGFDQ9GZP0 370 aaPredicted RBP7.68□□□□□ -1.18
DDB1-210ENST00000538129 SPON1Q9HCB6 807 aa7.68□□□□□ -1.18
DDB1-210ENST00000538129 POLMQ9NP87 494 aaPredicted RBP7.68□□□□□ -1.18
DDB1-210ENST00000538129 RBM19Q9Y4C8 960 aaKnown RBP7.68□□□□□ -1.18
DDB1-210ENST00000538129 TJP1Q07157 1748 aa7.68□□□□□ -1.18
DDB1-210ENST00000538129 A0A087WZG4 1122 aa7.67□□□□□ -1.18
DDB1-210ENST00000538129 TTLL8A6PVC2 850 aa7.67□□□□□ -1.18
DDB1-210ENST00000538129 A1BGP04217 495 aa7.67□□□□□ -1.18
DDB1-210ENST00000538129 HOXB7P09629 217 aa7.67□□□□□ -1.18
DDB1-210ENST00000538129 CANXP27824 592 aaKnown RBP7.67□□□□□ -1.18
DDB1-210ENST00000538129 ATP1A2P50993 1020 aa7.67□□□□□ -1.18
DDB1-210ENST00000538129 EIF5P55010 431 aaKnown RBP7.67□□□□□ -1.18
DDB1-210ENST00000538129 AMIGO3Q86WK7 504 aa7.67□□□□□ -1.18
DDB1-210ENST00000538129 MBIPQ9NS73 344 aa7.67□□□□□ -1.18
DDB1-210ENST00000538129 CASZ1Q86V15 1759 aa7.66□□□□□ -1.18
DDB1-210ENST00000538129 TUBGCP6Q96RT7 1819 aa7.66□□□□□ -1.18
DDB1-210ENST00000538129 SENP3-EIF4A1A0A087X0R7 540 aa7.66□□□□□ -1.18
DDB1-210ENST00000538129 PRAMEF22A3QJZ6 481 aa7.66□□□□□ -1.18
DDB1-210ENST00000538129 LCE2BO14633 110 aa7.66□□□□□ -1.18
DDB1-210ENST00000538129 ATP9BO43861 1147 aa7.66□□□□□ -1.18
DDB1-210ENST00000538129 ZBTB7AO95365 584 aa7.66□□□□□ -1.18
DDB1-210ENST00000538129 ADD1P35611 737 aaKnown RBP7.66□□□□□ -1.18
DDB1-210ENST00000538129 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.66□□□□□ -1.181e-6■■■■■ 28.8
DDB1-210ENST00000538129 NLGN1Q8N2Q7 840 aa7.66□□□□□ -1.18
DDB1-210ENST00000538129 ZBTB1Q9Y2K1 713 aa7.66□□□□□ -1.18
DDB1-210ENST00000538129 SOS1Q07889 1333 aaPredicted RBP7.66□□□□□ -1.18
DDB1-210ENST00000538129 ERBB4Q15303 1308 aa7.66□□□□□ -1.18
DDB1-210ENST00000538129 MEN1O00255 615 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 POLD1P28340 1107 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 GPC1P35052 558 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 DUSP27Q5VZP5 1158 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 NBPF10Q6P3W6 841 aaKnown RBP7.65□□□□□ -1.18
DDB1-210ENST00000538129 SMIM5Q71RC9 77 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 NBPF15Q8N660 670 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 ZNF521Q96K83 1311 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 AGBL1Q96MI9 1066 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 TRAIPQ9BWF2 469 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 MYH16Q9H6N6 1097 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 ZNF395Q9H8N7 513 aaPredicted RBP7.65□□□□□ -1.18
DDB1-210ENST00000538129 NARFQ9UHQ1 456 aa7.65□□□□□ -1.18
DDB1-210ENST00000538129 USP42Q9H9J4 1324 aaKnown RBP7.64□□□□□ -1.19
DDB1-210ENST00000538129 USP17L5A8MUK1 530 aa7.64□□□□□ -1.19
DDB1-210ENST00000538129 GYS1P13807 737 aa7.64□□□□□ -1.19
DDB1-210ENST00000538129 EIF2S2P20042 333 aaKnown RBP7.64□□□□□ -1.19
DDB1-210ENST00000538129 PLEKHM2Q8IWE5 1019 aa7.64□□□□□ -1.19
DDB1-210ENST00000538129 C8orf58Q8NAV2 365 aa7.64□□□□□ -1.19
DDB1-210ENST00000538129 OSBPL3Q9H4L5 887 aa7.64□□□□□ -1.19
DDB1-210ENST00000538129 SERPINA10Q9UK55 444 aa7.64□□□□□ -1.19
DDB1-210ENST00000538129 COL24A1Q17RW2 1714 aa7.64□□□□□ -1.19
DDB1-210ENST00000538129 COL15A1P39059 1388 aa7.63□□□□□ -1.19
DDB1-210ENST00000538129 A0A1W2PRU2 124 aa7.63□□□□□ -1.19
DDB1-210ENST00000538129 E9PSI1 815 aa7.63□□□□□ -1.19
DDB1-210ENST00000538129 ELL2O00472 640 aaPredicted RBP7.63□□□□□ -1.19
DDB1-210ENST00000538129 TM4SF1P30408 202 aa7.63□□□□□ -1.19
DDB1-210ENST00000538129 SCTRP47872 440 aa7.63□□□□□ -1.19
DDB1-210ENST00000538129 CLN3Q13286 438 aa7.63□□□□□ -1.19
DDB1-210ENST00000538129 NCOA4Q13772 614 aa7.63□□□□□ -1.19
DDB1-210ENST00000538129 KRT24Q2M2I5 525 aa7.63□□□□□ -1.19
DDB1-210ENST00000538129 USPL1Q5W0Q7 1092 aa7.63□□□□□ -1.19
DDB1-210ENST00000538129 CLEC4GQ6UXB4 293 aa7.63□□□□□ -1.19
DDB1-210ENST00000538129 TSR2Q969E8 191 aaKnown RBP7.63□□□□□ -1.19
DDB1-210ENST00000538129 CCDC97Q96F63 343 aaPredicted RBP7.63□□□□□ -1.19
DDB1-210ENST00000538129 INSM2Q96T92 566 aaPredicted RBP7.63□□□□□ -1.19
DDB1-210ENST00000538129 DDX21Q9NR30 783 aaKnown RBP eCLIP7.63□□□□□ -1.19
DDB1-210ENST00000538129 DBF4Q9UBU7 674 aaPredicted RBP7.63□□□□□ -1.19
DDB1-210ENST00000538129 CACNA1FO60840 1977 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 LAMB4A4D0S4 1761 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 FANCIQ9NVI1 1328 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 ERVV-1B6SEH8 477 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 BACH1O14867 736 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 MYL6BP14649 208 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 PIP4K2AP48426 406 aaPredicted RBP7.62□□□□□ -1.19
DDB1-210ENST00000538129 RNF144AP50876 292 aaPredicted RBP7.62□□□□□ -1.19
DDB1-210ENST00000538129 SLFN5Q08AF3 891 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 TWISTNBQ3B726 338 aaPredicted RBP7.62□□□□□ -1.19
DDB1-210ENST00000538129 CCDC30Q5VVM6 783 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 TRMT2AQ8IZ69 625 aaKnown RBP7.62□□□□□ -1.19
DDB1-210ENST00000538129 ESYT1Q9BSJ8 1104 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 HYPKQ9NX55 129 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 TFIP11Q9UBB9 837 aaKnown RBP7.62□□□□□ -1.19
DDB1-210ENST00000538129 PPP1R1BQ9UD71 204 aaPredicted RBP7.62□□□□□ -1.19
DDB1-210ENST00000538129 SRP68Q9UHB9 627 aaKnown RBP7.62□□□□□ -1.19
DDB1-210ENST00000538129 LRP5O75197 1615 aa7.62□□□□□ -1.19
DDB1-210ENST00000538129 USP17L3A6NCW0 530 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 USP17L4A6NCW7 530 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 PIK3CDO00329 1044 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 VAMP4O75379 141 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 CAMTA2O94983 1202 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 MMP10P09238 476 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 SNRPBP14678 240 aaKnown RBP7.61□□□□□ -1.19
DDB1-210ENST00000538129 EXOSC9Q06265 439 aaKnown RBP7.61□□□□□ -1.19
DDB1-210ENST00000538129 TSGA10IPQ3SY00 556 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 MSL1Q68DK7 614 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 USP17L2Q6R6M4 530 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 KIF6Q6ZMV9 814 aa7.61□□□□□ -1.19
DDB1-210ENST00000538129 USP17L1Q7RTZ2 530 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms