RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 NEFMP07197 916 aa7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 BRD2P25440 801 aaKnown RBP7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 IL13P35225 146 aa7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 ARHGAP4P98171 946 aa7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 UBAP2LQ14157 1087 aaKnown RBP7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 LBRQ14739 615 aaKnown RBP7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 HIF1AQ16665 826 aa7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 BICDL1Q6ZP65 573 aa7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 GLYCTKQ8IVS8 523 aa7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 ZNF280CQ8ND82 737 aa7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 IFT43Q96FT9 208 aa7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 PPP4R2Q9NY27 417 aa7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 DMGDHQ9UI17 866 aaKnown RBP7.13□□□□□ -1.27
NPIPB3-208ENST00000537983 TMEM94Q12767 1356 aa7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 ZBTB39O15060 712 aa7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 PPM1GO15355 546 aaPredicted RBP7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 TMPOP42166 694 aaKnown RBP7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 RRS1Q15050 365 aaKnown RBP7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 ARSJQ5FYB0 599 aaPredicted RBP7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 SAMD5Q5TGI4 173 aa7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 LRRC69Q6ZNQ3 347 aa7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 NLRP8Q86W28 1048 aa7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 ABTB2Q8N961 1025 aa7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 C19orf44Q9H6X5 657 aa7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 LTN1O94822 1766 aa7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 ALS2Q96Q42 1657 aa7.12□□□□□ -1.27
NPIPB3-208ENST00000537983 XIRP1Q702N8 1843 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 MAP3K19Q56UN5 1328 aa7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 PPFIA3O75145 1194 aa7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 FAM13AO94988 1023 aa7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 CT47B1P0C2W7 299 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 ITGA6P23229 1130 aa7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 EIF1AXP47813 144 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 IRX6P78412 446 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 TRIM22Q8IYM9 498 aa7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 PGBD3Q8N328 593 aa7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 ZNF837Q96EG3 531 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 MYH16Q9H6N6 1097 aa7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 ANKIB1Q9P2G1 1089 aa7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 ABCC6O95255 1503 aa7.11□□□□□ -1.27
NPIPB3-208ENST00000537983 MSH6P52701 1360 aa7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 MICAL2O94851 1124 aa7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 PRKAR2BP31323 418 aa7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 CALD1Q05682 793 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 TYRO3Q06418 890 aa7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 LMOD3Q0VAK6 560 aa7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 EIF4A2Q14240 407 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 NFE2L2Q16236 605 aa7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 DBN1Q16643 649 aa7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 EFHC2Q5JST6 749 aa7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 RIPOR1Q6ZS17 1223 aa7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 TREML1Q86YW5 311 aa7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 NUCKS1Q9H1E3 243 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 RRP7AQ9Y3A4 280 aaKnown RBP7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 MED1Q15648 1581 aaPredicted RBP7.1□□□□□ -1.27
NPIPB3-208ENST00000537983 KDRP35968 1356 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 DLG5Q8TDM6 1919 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 USP19O94966 1318 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 H7C1W4 665 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 FZD6O60353 706 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 ATF3P18847 181 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 FBLN1P23142 703 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 HSPA2P54652 639 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 NOM1Q5C9Z4 860 aaKnown RBP7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 BTLAQ7Z6A9 289 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 GMCL1Q96IK5 515 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 NDFIP2Q9NV92 336 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 PODXL2Q9NZ53 605 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 CAMTA1Q9Y6Y1 1673 aa7.09□□□□□ -1.27
NPIPB3-208ENST00000537983 LRRC37A3O60309 1634 aa7.09□□□□□ -1.28
NPIPB3-208ENST00000537983 IGSF1Q8N6C5 1336 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 CRYBG1Q9Y4K1 1723 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 OPLAHO14841 1288 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 EFSO43281 561 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 FAM157BP0CG42 384 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 GRNP28799 593 aaKnown RBP7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 INPP5BP32019 993 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 ZAP70P43403 619 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 AMPHP49418 695 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 IDH3AP50213 366 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 RIPK4P57078 832 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 TMCO4Q5TGY1 634 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 ALKBH2Q6NS38 261 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 ATCAYQ86WG3 371 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 KCNH5Q8NCM2 988 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 ZCCHC2Q9C0B9 1178 aaKnown RBP7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 BIN2Q9UBW5 565 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 HCN2Q9UL51 889 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 GJA3Q9Y6H8 435 aa7.08□□□□□ -1.28
NPIPB3-208ENST00000537983 FANCIQ9NVI1 1328 aa7.07□□□□□ -1.28
NPIPB3-208ENST00000537983 PXDNQ92626 1479 aa7.07□□□□□ -1.28
NPIPB3-208ENST00000537983 HMOX1P09601 288 aa7.07□□□□□ -1.28
NPIPB3-208ENST00000537983 HOXC9P31274 260 aa7.07□□□□□ -1.28
NPIPB3-208ENST00000537983 FIGNL1Q6PIW4 674 aa7.07□□□□□ -1.28
NPIPB3-208ENST00000537983 NANOS1Q8WY41 292 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-208ENST00000537983 NEUROD4Q9HD90 331 aa7.07□□□□□ -1.28
NPIPB3-208ENST00000537983 PCDHGC4Q9Y5F7 938 aa7.07□□□□□ -1.28
NPIPB3-208ENST00000537983 NCAPD2Q15021 1401 aa7.07□□□□□ -1.28
NPIPB3-208ENST00000537983 TNS3Q68CZ2 1445 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms