RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 TAF1P21675 1872 aa10.95□□□□□ -0.66
PTPRR-205ENST00000537619 NR1I2O75469 434 aa10.95□□□□□ -0.66
PTPRR-205ENST00000537619 MBD4O95243 580 aa10.95□□□□□ -0.66
PTPRR-205ENST00000537619 IGHMBP2P38935 993 aaKnown RBP10.95□□□□□ -0.66
PTPRR-205ENST00000537619 VPS72Q15906 364 aa10.95□□□□□ -0.66
PTPRR-205ENST00000537619 HS1BP3Q53T59 392 aa10.95□□□□□ -0.66
PTPRR-205ENST00000537619 C8orf37Q96NL8 207 aa10.95□□□□□ -0.66
PTPRR-205ENST00000537619 USP28Q96RU2 1077 aa10.95□□□□□ -0.66
PTPRR-205ENST00000537619 USP25Q9UHP3 1055 aa10.95□□□□□ -0.66
PTPRR-205ENST00000537619 TIAM2Q8IVF5 1701 aa10.95□□□□□ -0.66
PTPRR-205ENST00000537619 WDR19Q8NEZ3 1342 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 CNTNAP4Q9C0A0 1308 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 B4E1Z4 1266 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 SH2B2O14492 632 aaPredicted RBP10.94□□□□□ -0.66
PTPRR-205ENST00000537619 PRKAB2O43741 272 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 CEBPZQ03701 1054 aaKnown RBP10.94□□□□□ -0.66
PTPRR-205ENST00000537619 ALX1Q15699 326 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 CAMK4Q16566 473 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 UVSSAQ2YD98 709 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 RALYLQ86SE5 291 aaKnown RBP10.94□□□□□ -0.66
PTPRR-205ENST00000537619 AMIGO3Q86WK7 504 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 NUP62CLQ9H1M0 184 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 ARMT1Q9H993 441 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 GJB4Q9NTQ9 266 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 TBC1D9BQ66K14 1250 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 CLEC4GQ6UXB4 293 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 RBM43Q6ZSC3 357 aaKnown RBP10.94□□□□□ -0.66
PTPRR-205ENST00000537619 LCORLQ8N3X6 602 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 GOLPH3LQ9H4A5 285 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 CLSTN2Q9H4D0 955 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 SRP68Q9UHB9 627 aaKnown RBP10.94□□□□□ -0.66
PTPRR-205ENST00000537619 RCOR1Q9UKL0 485 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 NOL7Q9UMY1 257 aaKnown RBP10.94□□□□□ -0.66
PTPRR-205ENST00000537619 MRVI1Q9Y6F6 885 aa10.94□□□□□ -0.66
PTPRR-205ENST00000537619 ZNF804BA4D1E1 1349 aa10.93□□□□□ -0.66
PTPRR-205ENST00000537619 ZMYM6O95789 1325 aa10.93□□□□□ -0.66
PTPRR-205ENST00000537619 GSG1L2A8MUP6 293 aa10.93□□□□□ -0.66
PTPRR-205ENST00000537619 APPP05067 770 aa10.93□□□□□ -0.66
PTPRR-205ENST00000537619 CTDSPL2Q05D32 466 aa10.93□□□□□ -0.66
PTPRR-205ENST00000537619 CKAP2LQ8IYA6 745 aa10.93□□□□□ -0.66
PTPRR-205ENST00000537619 IFNL3Q8IZI9 196 aa10.93□□□□□ -0.66
PTPRR-205ENST00000537619 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.93□□□□□ -0.66
PTPRR-205ENST00000537619 IQSEC3Q9UPP2 1182 aaPredicted RBP10.93□□□□□ -0.66
PTPRR-205ENST00000537619 THSD7AQ9UPZ6 1657 aa10.93□□□□□ -0.66
PTPRR-205ENST00000537619 KIF28PB7ZC32 967 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 PATL2C9JE40 543 aaKnown RBP10.92□□□□□ -0.66
PTPRR-205ENST00000537619 RXRAP19793 462 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 TYRO3Q06418 890 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 MAP3K12Q12852 859 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 SF3B3Q15393 1217 aaKnown RBP10.92□□□□□ -0.66
PTPRR-205ENST00000537619 MAP3K11Q16584 847 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 BICDL1Q6ZP65 573 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 ADGRA1Q86SQ6 560 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 BICD2Q8TD16 824 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 IGDCC4Q8TDY8 1250 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 DDX19AQ9NUU7 478 aaKnown RBP10.92□□□□□ -0.66
PTPRR-205ENST00000537619 ORC3Q9UBD5 711 aaPredicted RBP10.92□□□□□ -0.66
PTPRR-205ENST00000537619 ZNF652Q9Y2D9 606 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 BTAF1O14981 1849 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 COL24A1Q17RW2 1714 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 ECM29Q5VYK3 1845 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 CDC27P30260 824 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 GYG1P46976 350 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 FAM182BQ5T319 152 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 KLHL34Q8N239 644 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 CELF1Q92879 486 aaKnown RBP10.92□□□□□ -0.66
PTPRR-205ENST00000537619 NGLY1Q96IV0 654 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 AIFM3Q96NN9 605 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 LY9Q9HBG7 655 aa10.92□□□□□ -0.66
PTPRR-205ENST00000537619 FAM217BQ9NTX9 383 aaPredicted RBP10.92□□□□□ -0.66
PTPRR-205ENST00000537619 ANGEL1Q9UNK9 670 aaKnown RBP10.92□□□□□ -0.66
PTPRR-205ENST00000537619 PNPLA7Q6ZV29 1317 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 SMIM22K7EJ46 135 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 KDM4AO75164 1064 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 ADCY5O95622 1261 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 KLRK1P26718 216 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 APOA5Q6Q788 366 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 SLC51AQ86UW1 340 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 FNBP4Q8N3X1 1017 aaPredicted RBP10.91□□□□□ -0.66
PTPRR-205ENST00000537619 MPNDQ8N594 471 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 MIGA1Q8NAN2 632 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 CHMP4CQ96CF2 233 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 CDC5LQ99459 802 aaKnown RBP10.91□□□□□ -0.66
PTPRR-205ENST00000537619 TNMDQ9H2S6 317 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 CFAP45Q9UL16 551 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 ZKSCAN5Q9Y2L8 839 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 KIF3AQ9Y496 699 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 NHSQ6T4R5 1651 aa10.91□□□□□ -0.66
PTPRR-205ENST00000537619 CACNA1SQ13698 1873 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 GOLGA6L4A6NEF3 574 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 CCDC192P0DO97 292 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 TRDNQ13061 729 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 ANKRD18AQ8IVF6 992 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 CCDC24Q8N4L8 307 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 FBXO18Q8NFZ0 1043 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 ZNF384Q8TF68 577 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 C8orf76Q96K31 380 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 MYL10Q9BUA6 226 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 NAPBQ9H115 298 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms