RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 GALNT6Q8NCL4 622 aa8.3□□□□□ -1.08
PRKDC-208ENST00000536710 EDARADDQ8WWZ3 215 aa8.3□□□□□ -1.08
PRKDC-208ENST00000536710 JARID2Q92833 1246 aaPredicted RBP8.3□□□□□ -1.08
PRKDC-208ENST00000536710 ACDQ96AP0 544 aa8.3□□□□□ -1.08
PRKDC-208ENST00000536710 EAF1Q96JC9 268 aaPredicted RBP8.3□□□□□ -1.08
PRKDC-208ENST00000536710 PPME1Q9Y570 386 aa8.3□□□□□ -1.08
PRKDC-208ENST00000536710 SHROOM4Q9ULL8 1493 aa8.3□□□□□ -1.08
PRKDC-208ENST00000536710 M0R082 166 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 SSBP05455 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
PRKDC-208ENST00000536710 AMPD1P23109 780 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 ARL4DP49703 201 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 GSTM4Q03013 218 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 LRRC14Q15048 493 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 ZNF417Q8TAU3 575 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 SPATA32Q96LK8 384 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 ZNF587Q96SQ5 575 aaPredicted RBP8.29□□□□□ -1.08
PRKDC-208ENST00000536710 EMILIN2Q9BXX0 1053 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 UBP1Q9NZI7 540 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 EFR3BQ9Y2G0 817 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 PCDHB5Q9Y5E4 795 aa8.29□□□□□ -1.08
PRKDC-208ENST00000536710 LINC01387J3KSC0 135 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 SOX1O00570 391 aaPredicted RBP8.28□□□□□ -1.08
PRKDC-208ENST00000536710 TLR3O15455 904 aaKnown RBP8.28□□□□□ -1.08
PRKDC-208ENST00000536710 BMP6P22004 513 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 ARNTP27540 789 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 NASPP49321 788 aaPredicted RBP8.28□□□□□ -1.08
PRKDC-208ENST00000536710 AFF1P51825 1210 aaKnown RBP8.28□□□□□ -1.08
PRKDC-208ENST00000536710 KRT76Q01546 638 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 SEPT6Q14141 434 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 KANK3Q6NY19 840 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 LLGL2Q6P1M3 1020 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 BNC2Q6ZN30 1099 aaPredicted RBP8.28□□□□□ -1.08
PRKDC-208ENST00000536710 C1orf229Q6ZS94 237 aaPredicted RBP8.28□□□□□ -1.08
PRKDC-208ENST00000536710 C8orf86Q6ZUL3 223 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 MCF2L2Q86YR7 1114 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 WFDC8Q8IUA0 241 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 TRIM42Q8IWZ5 723 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 GRIN3AQ8TCU5 1115 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 RASGRP4Q8TDF6 673 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 NT5C1AQ9BXI3 368 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 CYP8B1Q9UNU6 501 aa8.28□□□□□ -1.08
PRKDC-208ENST00000536710 STK10O94804 968 aaKnown RBP8.27□□□□□ -1.09
PRKDC-208ENST00000536710 FGRP09769 529 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 GARTP22102 1010 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 GRIK5Q16478 980 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 RASIP1Q5U651 963 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 C20orf204Q6ZNR8 217 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 CHSY3Q70JA7 882 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 STK35Q8TDR2 534 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 KCNB2Q92953 911 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 NKD1Q969G9 470 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 SEC16BQ96JE7 1060 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 ZC3H12CQ9C0D7 883 aaKnown RBP8.27□□□□□ -1.09
PRKDC-208ENST00000536710 GINM1Q9NU53 330 aa8.27□□□□□ -1.09
PRKDC-208ENST00000536710 GREM1O60565 184 aa8.26□□□□□ -1.09
PRKDC-208ENST00000536710 F13A1P00488 732 aa8.26□□□□□ -1.09
PRKDC-208ENST00000536710 PIP4K2BP78356 416 aa8.26□□□□□ -1.09
PRKDC-208ENST00000536710 C19orf57Q0VDD7 668 aa8.26□□□□□ -1.09
PRKDC-208ENST00000536710 AP3B2Q13367 1082 aa8.26□□□□□ -1.09
PRKDC-208ENST00000536710 SEZ6Q53EL9 994 aa8.26□□□□□ -1.09
PRKDC-208ENST00000536710 MAP1SQ66K74 1059 aaPredicted RBP8.26□□□□□ -1.09
PRKDC-208ENST00000536710 HGSNATQ68CP4 663 aa8.26□□□□□ -1.09
PRKDC-208ENST00000536710 FAM196AQ6ZSG2 479 aa8.26□□□□□ -1.09
PRKDC-208ENST00000536710 CPLX3Q8WVH0 158 aa8.26□□□□□ -1.09
PRKDC-208ENST00000536710 KCNQ5Q9NR82 932 aa8.26□□□□□ -1.09
PRKDC-208ENST00000536710 BPNT1O95861 308 aa8.25□□□□□ -1.09
PRKDC-208ENST00000536710 MCM4P33991 863 aa8.25□□□□□ -1.09
PRKDC-208ENST00000536710 CRKP46108 304 aa8.25□□□□□ -1.09
PRKDC-208ENST00000536710 BAG6P46379 1132 aa8.25□□□□□ -1.09
PRKDC-208ENST00000536710 FBXO27Q8NI29 283 aa8.25□□□□□ -1.09
PRKDC-208ENST00000536710 PMFBP1Q8TBY8 1022 aa8.25□□□□□ -1.09
PRKDC-208ENST00000536710 ARMC5Q96C12 935 aa8.25□□□□□ -1.09
PRKDC-208ENST00000536710 BTBD6Q96KE9 485 aa8.25□□□□□ -1.09
PRKDC-208ENST00000536710 CORO1BQ9BR76 489 aa8.25□□□□□ -1.09
PRKDC-208ENST00000536710 CARD10Q9BWT7 1032 aa8.25□□□□□ -1.09
PRKDC-208ENST00000536710 FSCN2O14926 492 aa8.24□□□□□ -1.09
PRKDC-208ENST00000536710 OIP5O43482 229 aa8.24□□□□□ -1.09
PRKDC-208ENST00000536710 GSTP1P09211 210 aaKnown RBP8.24□□□□□ -1.09
PRKDC-208ENST00000536710 MSL1Q68DK7 614 aa8.24□□□□□ -1.09
PRKDC-208ENST00000536710 GATAD2BQ8WXI9 593 aa8.24□□□□□ -1.09
PRKDC-208ENST00000536710 ACSBG1Q96GR2 724 aa8.24□□□□□ -1.09
PRKDC-208ENST00000536710 SOX17Q9H6I2 414 aaPredicted RBP8.24□□□□□ -1.09
PRKDC-208ENST00000536710 CYP11A1P05108 521 aa8.23□□□□□ -1.09
PRKDC-208ENST00000536710 BCRP11274 1271 aa8.23□□□□□ -1.09
PRKDC-208ENST00000536710 CWF19L2Q2TBE0 894 aaKnown RBP8.23□□□□□ -1.09
PRKDC-208ENST00000536710 DPH6Q7L8W6 267 aa8.23□□□□□ -1.09
PRKDC-208ENST00000536710 CCDC84Q86UT8 332 aaPredicted RBP8.23□□□□□ -1.09
PRKDC-208ENST00000536710 WNT8BQ93098 351 aa8.23□□□□□ -1.09
PRKDC-208ENST00000536710 HIRIP3Q9BW71 556 aaPredicted RBP8.23□□□□□ -1.09
PRKDC-208ENST00000536710 MRVI1Q9Y6F6 885 aa8.23□□□□□ -1.09
PRKDC-208ENST00000536710 ROBO2Q9HCK4 1378 aa8.22□□□□□ -1.09
PRKDC-208ENST00000536710 SHISA8B8ZZ34 492 aa8.22□□□□□ -1.09
PRKDC-208ENST00000536710 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
PRKDC-208ENST00000536710 COL9A2Q14055 689 aaPredicted RBP8.22□□□□□ -1.09
PRKDC-208ENST00000536710 MPP2Q14168 576 aa8.22□□□□□ -1.09
PRKDC-208ENST00000536710 POU4F3Q15319 338 aa8.22□□□□□ -1.09
PRKDC-208ENST00000536710 FBXW10Q5XX13 1052 aa8.22□□□□□ -1.09
PRKDC-208ENST00000536710 MPRIPQ6WCQ1 1025 aa8.22□□□□□ -1.09
PRKDC-208ENST00000536710 DMRTC2Q8IXT2 367 aaPredicted RBP8.22□□□□□ -1.09
PRKDC-208ENST00000536710 OSGEPQ9NPF4 335 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms