RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 PLEKHA4Q9H4M7 779 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 C14orf93Q9H972 538 aaKnown RBP11.62□□□□□ -0.55
RFX4-204ENST00000536688 KLC4Q9NSK0 619 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 N4BP2Q86UW6 1770 aaPredicted RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 PES1O00541 588 aaKnown RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 KIF3BO15066 747 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 RASSF9O75901 435 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 EZRP15311 586 aaKnown RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 TBX2Q13207 712 aaPredicted RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 PDCD2Q16342 344 aaPredicted RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 TLDC1Q6P9B6 456 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 KIAA1328Q86T90 577 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 NECAB1Q8N987 351 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 PSMD1Q99460 953 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 GOLPH3LQ9H4A5 285 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 HPCAL4Q9UM19 191 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 SIGLEC1Q9BZZ2 1709 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 A0A1W2PP64 1363 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 ABCC6O95255 1503 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 USP42Q9H9J4 1324 aaKnown RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 ZC3H4Q9UPT8 1303 aaKnown RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 PHACTR2O75167 634 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 TOP1P11387 765 aaKnown RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 ADD1P35611 737 aaKnown RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 PRPHP41219 470 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 NECTIN1Q15223 517 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 WWC2Q6AWC2 1192 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 NAA16Q6N069 864 aaPredicted RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 FMR1NBQ8N0W7 255 aaPredicted RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 CERKQ8TCT0 537 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 BCAS4Q8TDM0 211 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 BORCS6Q96GS4 357 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 ZNF396Q96N95 335 aaPredicted RBP11.61□□□□□ -0.55
RFX4-204ENST00000536688 KAT14Q9H8E8 782 aa11.61□□□□□ -0.55
RFX4-204ENST00000536688 KIF20BQ96Q89 1820 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 CTAGE15A4D2H0 777 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 CTAGE8P0CG41 777 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 SLC8A1P32418 973 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 UBASH3AP57075 661 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 DCTN1Q14203 1278 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 CEP85LQ5SZL2 805 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 C14orf37Q86TY3 774 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 CTAGE6Q86UF2 777 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 TAX1BP1Q86VP1 789 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 ARHGEF25Q86VW2 580 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 CTAGE4Q8IX94 777 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 PI4K2BQ8TCG2 481 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 SH3GL2Q99962 352 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 CAPS2Q9BXY5 557 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 VCPKMTQ9H867 229 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 SLC24A3Q9HC58 644 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 NPHP4O75161 1426 aaPredicted RBP11.6□□□□□ -0.55
RFX4-204ENST00000536688 ADGRB3O60242 1522 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 TARSL2A2RTX5 802 aaKnown RBP11.6□□□□□ -0.55
RFX4-204ENST00000536688 SRRM3A6NNA2 597 aaPredicted RBP11.6□□□□□ -0.55
RFX4-204ENST00000536688 MYBL2P10244 700 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 CCNHP51946 323 aaPredicted RBP11.6□□□□□ -0.55
RFX4-204ENST00000536688 CLNS1AP54105 237 aaKnown RBP11.6□□□□□ -0.55
RFX4-204ENST00000536688 COG1Q8WTW3 980 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 TMX4Q9H1E5 349 aaPredicted RBP11.6□□□□□ -0.55
RFX4-204ENST00000536688 CD248Q9HCU0 757 aa11.6□□□□□ -0.55
RFX4-204ENST00000536688 ARHGEF28Q8N1W1 1705 aaKnown RBP11.59□□□□□ -0.55
RFX4-204ENST00000536688 GRIN2DO15399 1336 aa11.59□□□□□ -0.55
RFX4-204ENST00000536688 FYB1O15117 783 aa11.59□□□□□ -0.55
RFX4-204ENST00000536688 KIF5CO60282 957 aa11.59□□□□□ -0.55
RFX4-204ENST00000536688 SNUPNO95149 360 aaKnown RBP11.59□□□□□ -0.55
RFX4-204ENST00000536688 CCDC175P0C221 793 aa11.59□□□□□ -0.55
RFX4-204ENST00000536688 NBPF7P0C2Y1 421 aaPredicted RBP11.59□□□□□ -0.55
RFX4-204ENST00000536688 SKOR1P84550 965 aa11.59□□□□□ -0.55
RFX4-204ENST00000536688 DPCR1Q3MIW9 517 aa11.59□□□□□ -0.55
RFX4-204ENST00000536688 ADCK5Q3MIX3 580 aa11.59□□□□□ -0.55
RFX4-204ENST00000536688 MRPS27Q92552 414 aaKnown RBP11.59□□□□□ -0.55
RFX4-204ENST00000536688 SDF4Q9BRK5 362 aa11.59□□□□□ -0.55
RFX4-204ENST00000536688 SUGCTQ9HAC7 445 aa11.59□□□□□ -0.55
RFX4-204ENST00000536688 MYO1AQ9UBC5 1043 aa11.59□□□□□ -0.55
RFX4-204ENST00000536688 PPLO60437 1756 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 MROH2AA6NES4 1674 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 SBNO1A3KN83 1393 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 MAP3K5Q99683 1374 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 GOLGA6CA6NDK9 693 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 GOLGA6DP0CG33 693 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 CPA1P15085 419 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 CDR1P51861 262 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 ACTN3Q08043 901 aaPredicted RBP11.58□□□□□ -0.56
RFX4-204ENST00000536688 STIM1Q13586 685 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 SLC5A9Q2M3M2 681 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 FSIP1Q8NA03 581 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 PHACTR3Q96KR7 559 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 LLPHQ9BRT6 129 aaKnown RBP11.58□□□□□ -0.56
RFX4-204ENST00000536688 NAA15Q9BXJ9 866 aaKnown RBP11.58□□□□□ -0.56
RFX4-204ENST00000536688 SNRKQ9NRH2 765 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 GOLGA6AQ9NYA3 693 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 KIDINS220Q9ULH0 1771 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 CTAGE9A4FU28 777 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 MYO1FO00160 1098 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 PFKFB2O60825 505 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 IFFO1Q0D2I5 559 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 SLMAPQ14BN4 828 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 CCDC40Q4G0X9 1142 aa11.58□□□□□ -0.56
RFX4-204ENST00000536688 FILIP1LQ4L180 1135 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms