RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 ZC3H12CQ9C0D7 883 aaKnown RBP24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 ARMT1Q9H993 441 aa24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 RPAP1Q9BWH6 1393 aaPredicted RBP24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 SALL1Q9NSC2 1324 aa24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 TSGA10IPQ3SY00 556 aa24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 MAST2Q6P0Q8 1798 aa24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 FGAP02671 866 aa24.27■■□□□ 1.48
TNFRSF1A-205ENST00000534885 NAA16Q6N069 864 aaPredicted RBP24.27■■□□□ 1.48
TNFRSF1A-205ENST00000534885 LCORLQ8N3X6 602 aa24.27■■□□□ 1.48
TNFRSF1A-205ENST00000534885 SNED1Q8TER0 1413 aa24.27■■□□□ 1.48
TNFRSF1A-205ENST00000534885 KIAA1551Q9HCM1 1747 aa24.27■■□□□ 1.48
TNFRSF1A-205ENST00000534885 TM6SF1Q9BZW5 370 aa24.26■■□□□ 1.47
TNFRSF1A-205ENST00000534885 GRIK5Q16478 980 aa24.26■■□□□ 1.47
TNFRSF1A-205ENST00000534885 TTLL6Q8N841 843 aa24.26■■□□□ 1.47
TNFRSF1A-205ENST00000534885 ZSWIM6Q9HCJ5 1215 aa24.26■■□□□ 1.47
TNFRSF1A-205ENST00000534885 C21orf2O43822 256 aa24.25■■□□□ 1.47
TNFRSF1A-205ENST00000534885 ZGPATQ8N5A5 531 aaKnown RBP24.25■■□□□ 1.47
TNFRSF1A-205ENST00000534885 COA1Q9GZY4 146 aa24.25■■□□□ 1.47
TNFRSF1A-205ENST00000534885 TTC14Q96N46 770 aa24.25■■□□□ 1.47
TNFRSF1A-205ENST00000534885 SGIP1Q9BQI5 828 aa24.25■■□□□ 1.47
TNFRSF1A-205ENST00000534885 APPP05067 770 aa24.24■■□□□ 1.47
TNFRSF1A-205ENST00000534885 DOK7Q18PE1 504 aa24.24■■□□□ 1.47
TNFRSF1A-205ENST00000534885 SPTY2D1Q68D10 685 aaPredicted RBP24.24■■□□□ 1.47
TNFRSF1A-205ENST00000534885 LDHBP07195 334 aaKnown RBP24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 STOX1Q6ZVD7 989 aa24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 EYA3Q99504 573 aa24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 MAGEB6P1A0A0J9YX57 407 aa24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 PRKAB2O43741 272 aa24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 PSMA5P28066 241 aa24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 NOL8Q76FK4 1167 aaKnown RBP24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 RUFY3Q7L099 469 aa24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 DZIP1Q86YF9 867 aaKnown RBP24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 RIOK1Q9BRS2 568 aaKnown RBP24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 RTFDC1Q9BY42 306 aaPredicted RBP24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 SLKQ9H2G2 1235 aaPredicted RBP24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 EPB41L4AQ9HCS5 686 aaPredicted RBP24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 CTNNA3Q9UI47 895 aa24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 CYP46A1Q9Y6A2 500 aa24.23■■□□□ 1.47
TNFRSF1A-205ENST00000534885 LAMA4Q16363 1823 aa24.22■■□□□ 1.47
TNFRSF1A-205ENST00000534885 HAND2P61296 217 aa24.22■■□□□ 1.47
TNFRSF1A-205ENST00000534885 KRT32Q14532 448 aa24.22■■□□□ 1.47
TNFRSF1A-205ENST00000534885 DYNLL1P63167 89 aaKnown RBP24.22■■□□□ 1.47
TNFRSF1A-205ENST00000534885 GTF2IP78347 998 aa24.22■■□□□ 1.47
TNFRSF1A-205ENST00000534885 FAM205AQ6ZU69 1335 aa24.21■■□□□ 1.47
TNFRSF1A-205ENST00000534885 GSG1L2A8MUP6 293 aa24.21■■□□□ 1.47
TNFRSF1A-205ENST00000534885 PATL2C9JE40 543 aaKnown RBP24.21■■□□□ 1.47
TNFRSF1A-205ENST00000534885 TGFB2P61812 414 aa24.21■■□□□ 1.47
TNFRSF1A-205ENST00000534885 MFSD14BQ5SR56 506 aa24.21■■□□□ 1.47
TNFRSF1A-205ENST00000534885 CC2D2BQ6DHV5 1058 aa24.21■■□□□ 1.47
TNFRSF1A-205ENST00000534885 PPP1R1BQ9UD71 204 aaPredicted RBP24.21■■□□□ 1.47
TNFRSF1A-205ENST00000534885 AK2P54819 239 aa24.2■■□□□ 1.47
TNFRSF1A-205ENST00000534885 IMMTQ16891 758 aaKnown RBP24.2■■□□□ 1.47
TNFRSF1A-205ENST00000534885 BLOC1S2Q6QNY1 142 aa24.2■■□□□ 1.47
TNFRSF1A-205ENST00000534885 DBNDD1Q9H9R9 158 aa24.2■■□□□ 1.47
TNFRSF1A-205ENST00000534885 SLC4A4Q9Y6R1 1079 aa24.2■■□□□ 1.47
TNFRSF1A-205ENST00000534885 GNAT2P19087 354 aa24.2■■□□□ 1.46
TNFRSF1A-205ENST00000534885 PTGER2P43116 358 aa24.2■■□□□ 1.46
TNFRSF1A-205ENST00000534885 IFNL3Q8IZI9 196 aa24.2■■□□□ 1.46
TNFRSF1A-205ENST00000534885 NEK1Q96PY6 1258 aa24.2■■□□□ 1.46
TNFRSF1A-205ENST00000534885 PDRG1Q9NUG6 133 aa24.2■■□□□ 1.46
TNFRSF1A-205ENST00000534885 E7EWF7 191 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 MCM2P49736 904 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 DIXDC1Q155Q3 683 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 TCEANC2Q96MN5 208 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 MYH2Q9UKX2 1941 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 G3V3G9 751 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 RPS6KB1P23443 525 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 DCAF8Q5TAQ9 597 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 SDR42E1Q8WUS8 393 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 TMX3Q96JJ7 454 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 FOXD4L1Q9NU39 408 aa24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 AATFQ9NY61 560 aaKnown RBP eCLIP24.19■■□□□ 1.46
TNFRSF1A-205ENST00000534885 BRCA1P38398 1863 aaKnown RBP24.18■■□□□ 1.46
TNFRSF1A-205ENST00000534885 ALX1Q15699 326 aa24.18■■□□□ 1.46
TNFRSF1A-205ENST00000534885 AOC3Q16853 763 aa24.18■■□□□ 1.46
TNFRSF1A-205ENST00000534885 IL27Q8NEV9 243 aa24.18■■□□□ 1.46
TNFRSF1A-205ENST00000534885 TBC1D22AQ8WUA7 517 aa24.18■■□□□ 1.46
TNFRSF1A-205ENST00000534885 FBXW7Q969H0 707 aa24.18■■□□□ 1.46
TNFRSF1A-205ENST00000534885 LARP6Q9BRS8 491 aaKnown RBP24.18■■□□□ 1.46
TNFRSF1A-205ENST00000534885 ZNF213O14771 459 aa24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 HSP90AA1P07900 732 aaKnown RBP24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 CCDC93Q567U6 631 aa24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 KLHL34Q8N239 644 aa24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 NBPF3Q9H094 633 aa24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 NAPBQ9H115 298 aa24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 PIM2Q9P1W9 311 aa24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 ZMYM6O95789 1325 aa24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 SCN9AQ15858 1988 aa24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 TMED8Q6PL24 325 aaPredicted RBP24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 KCNQ5Q9NR82 932 aa24.17■■□□□ 1.46
TNFRSF1A-205ENST00000534885 IGSF3O75054 1194 aa24.15■■□□□ 1.46
TNFRSF1A-205ENST00000534885 PODNQ7Z5L7 613 aa24.15■■□□□ 1.46
TNFRSF1A-205ENST00000534885 CERS5Q8N5B7 392 aa24.15■■□□□ 1.46
TNFRSF1A-205ENST00000534885 BAZ2AQ9UIF9 1905 aaKnown RBP24.15■■□□□ 1.46
TNFRSF1A-205ENST00000534885 TDO2P48775 406 aa24.15■■□□□ 1.46
TNFRSF1A-205ENST00000534885 KIAA2012Q0VF49 1180 aa24.15■■□□□ 1.46
TNFRSF1A-205ENST00000534885 MXD3Q9BW11 206 aa24.15■■□□□ 1.46
TNFRSF1A-205ENST00000534885 ECE2O60344 883 aa24.14■■□□□ 1.46
TNFRSF1A-205ENST00000534885 GSTO1P78417 241 aa24.14■■□□□ 1.46
TNFRSF1A-205ENST00000534885 TBC1D10CQ8IV04 446 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms