RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CERS5Q8N5B7 392 aa12.7□□□□□ -0.38
CLSTN3-203ENST00000534830 SH3TC2Q8TF17 1288 aa12.7□□□□□ -0.38
CLSTN3-203ENST00000534830 PTPN18Q99952 460 aa12.7□□□□□ -0.38
CLSTN3-203ENST00000534830 LAMB1P07942 1786 aa12.69□□□□□ -0.38
CLSTN3-203ENST00000534830 UBE4AQ14139 1066 aa12.69□□□□□ -0.38
CLSTN3-203ENST00000534830 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
CLSTN3-203ENST00000534830 MTMR14Q8NCE2 650 aa12.69□□□□□ -0.38
CLSTN3-203ENST00000534830 PUS3Q9BZE2 481 aaKnown RBP12.69□□□□□ -0.38
CLSTN3-203ENST00000534830 USP44Q9H0E7 712 aa12.69□□□□□ -0.38
CLSTN3-203ENST00000534830 BICC1Q9H694 974 aaKnown RBP12.69□□□□□ -0.38
CLSTN3-203ENST00000534830 COL1A1P02452 1464 aaPredicted RBP12.69□□□□□ -0.38
CLSTN3-203ENST00000534830 CUL9Q8IWT3 2517 aa12.68□□□□□ -0.38
CLSTN3-203ENST00000534830 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
CLSTN3-203ENST00000534830 IREB2P48200 963 aaKnown RBP12.68□□□□□ -0.38
CLSTN3-203ENST00000534830 DLGAP5Q15398 846 aa12.68□□□□□ -0.38
CLSTN3-203ENST00000534830 SUPT20HL1Q3ZLR7 823 aa12.68□□□□□ -0.38
CLSTN3-203ENST00000534830 CNNM1Q9NRU3 951 aa12.68□□□□□ -0.38
CLSTN3-203ENST00000534830 SSC5DA1L4H1 1573 aa12.68□□□□□ -0.38
CLSTN3-203ENST00000534830 TESPA1A2RU30 521 aaPredicted RBP12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 UNCXA6NJT0 531 aa12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 PLIN1O60240 522 aa12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 TAF1CQ15572 869 aaPredicted RBP12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 TAF7LQ5H9L4 462 aa12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 ZNF804AQ7Z570 1209 aa12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 TDRD7Q8NHU6 1098 aaKnown RBP12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 OPTNQ96CV9 577 aa12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 FAM84BQ96KN1 310 aaPredicted RBP12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 ZFYVE28Q9HCC9 887 aa12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 PPP2R3BQ9Y5P8 575 aa12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 ARAP2Q8WZ64 1704 aa12.67□□□□□ -0.38
CLSTN3-203ENST00000534830 FAM205AQ6ZU69 1335 aa12.66□□□□□ -0.38
CLSTN3-203ENST00000534830 CLRN2A0PK11 232 aa12.66□□□□□ -0.38
CLSTN3-203ENST00000534830 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-203ENST00000534830 LRRC24Q50LG9 513 aa12.66□□□□□ -0.38
CLSTN3-203ENST00000534830 NBPF12Q5TAG4 269 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-203ENST00000534830 ANKRD13AQ8IZ07 590 aa12.66□□□□□ -0.38
CLSTN3-203ENST00000534830 VGLL2Q8N8G2 317 aa12.66□□□□□ -0.38
CLSTN3-203ENST00000534830 ELP3Q9H9T3 547 aa12.66□□□□□ -0.38
CLSTN3-203ENST00000534830 VEZTQ9HBM0 779 aa12.66□□□□□ -0.38
CLSTN3-203ENST00000534830 MROH5Q6ZUA9 1318 aa12.65□□□□□ -0.38
CLSTN3-203ENST00000534830 MYO1BO43795 1136 aa12.65□□□□□ -0.38
CLSTN3-203ENST00000534830 USP2O75604 605 aaPredicted RBP12.65□□□□□ -0.38
CLSTN3-203ENST00000534830 RFX5P48382 616 aaPredicted RBP12.65□□□□□ -0.38
CLSTN3-203ENST00000534830 KIF22Q14807 665 aa12.65□□□□□ -0.38
CLSTN3-203ENST00000534830 FBXO33Q7Z6M2 555 aa12.65□□□□□ -0.38
CLSTN3-203ENST00000534830 HTATIP2Q9BUP3 242 aa12.65□□□□□ -0.38
CLSTN3-203ENST00000534830 PCDHAC2Q9Y5I4 1007 aa12.65□□□□□ -0.38
CLSTN3-203ENST00000534830 NR2E3Q9Y5X4 410 aa12.65□□□□□ -0.38
CLSTN3-203ENST00000534830 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
CLSTN3-203ENST00000534830 HIBADHP31937 336 aaKnown RBP12.64□□□□□ -0.39
CLSTN3-203ENST00000534830 GYG1P46976 350 aa12.64□□□□□ -0.39
CLSTN3-203ENST00000534830 MTFR1Q15390 333 aa12.64□□□□□ -0.39
CLSTN3-203ENST00000534830 BRI3BPQ8WY22 251 aa12.64□□□□□ -0.39
CLSTN3-203ENST00000534830 SHISA4Q96DD7 197 aa12.64□□□□□ -0.39
CLSTN3-203ENST00000534830 MS4A4AQ96JQ5 239 aa12.64□□□□□ -0.39
CLSTN3-203ENST00000534830 ARHGAP39Q9C0H5 1083 aa12.64□□□□□ -0.39
CLSTN3-203ENST00000534830 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
CLSTN3-203ENST00000534830 ZSWIM8A7E2V4 1837 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 CCL15-CCL14A0A0B4J2E2 113 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 F8W031 263 aaPredicted RBP12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 WDHD1O75717 1129 aaPredicted RBP12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 PDE8BO95263 885 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 FGFR2P21802 821 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 CCL15Q16663 113 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 CFAP100Q494V2 611 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 LRCH3Q96II8 777 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 PRMT6Q96LA8 375 aaPredicted RBP12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 PRO3102Q9H379 93 aa12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 NOB1Q9ULX3 412 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-203ENST00000534830 AOX1Q06278 1338 aa12.62□□□□□ -0.39
CLSTN3-203ENST00000534830 OTOFQ9HC10 1997 aa12.62□□□□□ -0.39
CLSTN3-203ENST00000534830 SOX1O00570 391 aaPredicted RBP12.62□□□□□ -0.39
CLSTN3-203ENST00000534830 GTF2A2P52657 109 aa12.62□□□□□ -0.39
CLSTN3-203ENST00000534830 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-203ENST00000534830 RASA3Q14644 834 aa12.62□□□□□ -0.39
CLSTN3-203ENST00000534830 FAM43AQ8N2R8 423 aa12.62□□□□□ -0.39
CLSTN3-203ENST00000534830 NKX2-3Q8TAU0 364 aa12.62□□□□□ -0.39
CLSTN3-203ENST00000534830 KLHDC4Q8TBB5 520 aa12.62□□□□□ -0.39
CLSTN3-203ENST00000534830 JAG2Q9Y219 1238 aa12.62□□□□□ -0.39
CLSTN3-203ENST00000534830 MYH13Q9UKX3 1938 aa12.61□□□□□ -0.39
CLSTN3-203ENST00000534830 RBM5P52756 815 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLSTN3-203ENST00000534830 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
CLSTN3-203ENST00000534830 METTL24Q5JXM2 366 aa12.61□□□□□ -0.39
CLSTN3-203ENST00000534830 MFSD14BQ5SR56 506 aa12.61□□□□□ -0.39
CLSTN3-203ENST00000534830 SERPINA10Q9UK55 444 aa12.61□□□□□ -0.39
CLSTN3-203ENST00000534830 LAMA3Q16787 3333 aa12.61□□□□□ -0.39
CLSTN3-203ENST00000534830 KIF16BQ96L93 1317 aa12.61□□□□□ -0.39
CLSTN3-203ENST00000534830 A0A1W2PPC1 479 aa12.6□□□□□ -0.39
CLSTN3-203ENST00000534830 ZBTB7BO15156 539 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-203ENST00000534830 TLR2O60603 784 aa12.6□□□□□ -0.39
CLSTN3-203ENST00000534830 GNRH1P01148 92 aa12.6□□□□□ -0.39
CLSTN3-203ENST00000534830 PRMT2P55345 433 aa12.6□□□□□ -0.39
CLSTN3-203ENST00000534830 ATG9AQ7Z3C6 839 aa12.6□□□□□ -0.39
CLSTN3-203ENST00000534830 ARHGAP45Q92619 1136 aa12.6□□□□□ -0.39
CLSTN3-203ENST00000534830 EYA2O00167 538 aa12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 GJA8P48165 433 aa12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 VGLL4Q14135 290 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms