RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 PATL2C9JE40 543 aaKnown RBP33.53■■■□□ 2.96
SAMD1-202ENST00000533683 RPS8P62241 208 aaKnown RBP33.53■■■□□ 2.96
SAMD1-202ENST00000533683 HMGN5P82970 282 aaKnown RBP33.52■■■□□ 2.96
SAMD1-202ENST00000533683 ARMT1Q9H993 441 aa33.52■■■□□ 2.96
SAMD1-202ENST00000533683 LRP2BPQ9P2M1 347 aa33.52■■■□□ 2.96
SAMD1-202ENST00000533683 WDR19Q8NEZ3 1342 aa33.52■■■□□ 2.96
SAMD1-202ENST00000533683 C4AP0C0L4 1744 aa33.51■■■□□ 2.96
SAMD1-202ENST00000533683 PHF14O94880 888 aa33.51■■■□□ 2.96
SAMD1-202ENST00000533683 RFC4P35249 363 aa33.51■■■□□ 2.96
SAMD1-202ENST00000533683 KRT85P78386 507 aa33.51■■■□□ 2.96
SAMD1-202ENST00000533683 EPB41L4AQ9HCS5 686 aaPredicted RBP33.51■■■□□ 2.96
SAMD1-202ENST00000533683 DENND2AQ9ULE3 1009 aa33.51■■■□□ 2.96
SAMD1-202ENST00000533683 NASPP49321 788 aaPredicted RBP33.51■■■□□ 2.95
SAMD1-202ENST00000533683 TRAPPC3LQ5T215 181 aa33.51■■■□□ 2.95
SAMD1-202ENST00000533683 FAM196AQ6ZSG2 479 aa33.51■■■□□ 2.95
SAMD1-202ENST00000533683 BCL11BQ9C0K0 894 aaPredicted RBP33.51■■■□□ 2.95
SAMD1-202ENST00000533683 GNL3LQ9NVN8 582 aaKnown RBP33.51■■■□□ 2.95
SAMD1-202ENST00000533683 ZMYM6O95789 1325 aa33.51■■■□□ 2.95
SAMD1-202ENST00000533683 SALL1Q9NSC2 1324 aa33.51■■■□□ 2.95
SAMD1-202ENST00000533683 TRDNQ13061 729 aa33.5■■■□□ 2.95
SAMD1-202ENST00000533683 RBSNQ9H1K0 784 aa33.5■■■□□ 2.95
SAMD1-202ENST00000533683 LRRC4BQ9NT99 713 aa33.5■■■□□ 2.95
SAMD1-202ENST00000533683 H3BQV1 296 aa33.5■■■□□ 2.95
SAMD1-202ENST00000533683 TPRNQ4KMQ1 711 aa33.5■■■□□ 2.95
SAMD1-202ENST00000533683 IFFO2Q5TF58 517 aa33.5■■■□□ 2.95
SAMD1-202ENST00000533683 IFNL3Q8IZI9 196 aa33.5■■■□□ 2.95
SAMD1-202ENST00000533683 CAVIN4Q5BKX8 364 aa33.48■■■□□ 2.95
SAMD1-202ENST00000533683 NKX2-3Q8TAU0 364 aa33.48■■■□□ 2.95
SAMD1-202ENST00000533683 CHMP4CQ96CF2 233 aa33.48■■■□□ 2.95
SAMD1-202ENST00000533683 TTC6Q86TZ1 520 aa33.48■■■□□ 2.95
SAMD1-202ENST00000533683 FAM84BQ96KN1 310 aaPredicted RBP33.48■■■□□ 2.95
SAMD1-202ENST00000533683 COL1A1P02452 1464 aaPredicted RBP33.47■■■□□ 2.95
SAMD1-202ENST00000533683 KLF18A0A0U1RQI7 1052 aa33.47■■■□□ 2.95
SAMD1-202ENST00000533683 GSG1L2A8MUP6 293 aa33.47■■■□□ 2.95
SAMD1-202ENST00000533683 RESTQ13127 1097 aa33.47■■■□□ 2.95
SAMD1-202ENST00000533683 LCORLQ8N3X6 602 aa33.47■■■□□ 2.95
SAMD1-202ENST00000533683 PNPLA7Q6ZV29 1317 aa33.47■■■□□ 2.95
SAMD1-202ENST00000533683 NAPBQ9H115 298 aa33.47■■■□□ 2.95
SAMD1-202ENST00000533683 HPS5Q9UPZ3 1129 aa33.46■■■□□ 2.95
SAMD1-202ENST00000533683 KIF3AQ9Y496 699 aa33.46■■■□□ 2.95
SAMD1-202ENST00000533683 PRKAB2O43741 272 aa33.45■■■□□ 2.95
SAMD1-202ENST00000533683 TM4SF1P30408 202 aa33.45■■■□□ 2.95
SAMD1-202ENST00000533683 CYB5R4Q7L1T6 521 aa33.45■■■□□ 2.95
SAMD1-202ENST00000533683 VPS37DQ86XT2 251 aa33.45■■■□□ 2.95
SAMD1-202ENST00000533683 QTRT2Q9H974 415 aaKnown RBP33.45■■■□□ 2.95
SAMD1-202ENST00000533683 ABCF2Q9UG63 623 aa33.45■■■□□ 2.95
SAMD1-202ENST00000533683 NAA16Q6N069 864 aaPredicted RBP33.45■■■□□ 2.95
SAMD1-202ENST00000533683 ELP1O95163 1332 aa33.44■■■□□ 2.94
SAMD1-202ENST00000533683 PPFIA3O75145 1194 aa33.44■■■□□ 2.94
SAMD1-202ENST00000533683 GNAT2P19087 354 aa33.44■■■□□ 2.94
SAMD1-202ENST00000533683 CCDC183Q5T5S1 534 aa33.44■■■□□ 2.94
SAMD1-202ENST00000533683 EP400Q96L91 3159 aa33.44■■■□□ 2.94
SAMD1-202ENST00000533683 GOLGA8BA8MQT2 603 aa33.44■■■□□ 2.94
SAMD1-202ENST00000533683 MIGA1Q8NAN2 632 aa33.44■■■□□ 2.94
SAMD1-202ENST00000533683 ZSCAN16Q9H4T2 348 aaPredicted RBP33.44■■■□□ 2.94
SAMD1-202ENST00000533683 TFIP11Q9UBB9 837 aaKnown RBP33.44■■■□□ 2.94
SAMD1-202ENST00000533683 NEDD4P46934 1319 aa33.43■■■□□ 2.94
SAMD1-202ENST00000533683 B4E1Z4 1266 aa33.43■■■□□ 2.94
SAMD1-202ENST00000533683 SCAND2PQ9GZW5 306 aaPredicted RBP33.43■■■□□ 2.94
SAMD1-202ENST00000533683 SLC4A4Q9Y6R1 1079 aa33.43■■■□□ 2.94
SAMD1-202ENST00000533683 CYP7A1P22680 504 aa33.43■■■□□ 2.94
SAMD1-202ENST00000533683 KLRK1P26718 216 aa33.43■■■□□ 2.94
SAMD1-202ENST00000533683 NFIXQ14938 502 aa33.43■■■□□ 2.94
SAMD1-202ENST00000533683 FBXO33Q7Z6M2 555 aa33.43■■■□□ 2.94
SAMD1-202ENST00000533683 ADGRA1Q86SQ6 560 aa33.43■■■□□ 2.94
SAMD1-202ENST00000533683 NPHP1O15259 732 aa33.42■■■□□ 2.94
SAMD1-202ENST00000533683 FDPSP14324 419 aaKnown RBP33.42■■■□□ 2.94
SAMD1-202ENST00000533683 ANKRD2Q9GZV1 360 aa33.42■■■□□ 2.94
SAMD1-202ENST00000533683 RAI14Q9P0K7 980 aa33.42■■■□□ 2.94
SAMD1-202ENST00000533683 ANGEL1Q9UNK9 670 aaKnown RBP33.42■■■□□ 2.94
SAMD1-202ENST00000533683 CARMIL3Q8ND23 1372 aa33.42■■■□□ 2.94
SAMD1-202ENST00000533683 FOSBP53539 338 aa33.41■■■□□ 2.94
SAMD1-202ENST00000533683 INCENPQ9NQS7 918 aa33.41■■■□□ 2.94
SAMD1-202ENST00000533683 TNRC6CQ9HCJ0 1690 aaKnown RBP33.41■■■□□ 2.94
SAMD1-202ENST00000533683 CTDSPL2Q05D32 466 aa33.41■■■□□ 2.94
SAMD1-202ENST00000533683 NACAP1Q9BZK3 213 aa33.4■■■□□ 2.94
SAMD1-202ENST00000533683 SH2B2O14492 632 aaPredicted RBP33.4■■■□□ 2.94
SAMD1-202ENST00000533683 DHX16O60231 1041 aaKnown RBP33.4■■■□□ 2.94
SAMD1-202ENST00000533683 RAB11FIP4Q86YS3 637 aa33.4■■■□□ 2.94
SAMD1-202ENST00000533683 SPATA32Q96LK8 384 aa33.4■■■□□ 2.94
SAMD1-202ENST00000533683 ADRA2BP18089 450 aa33.39■■■□□ 2.94
SAMD1-202ENST00000533683 LEO1Q8WVC0 666 aaPredicted RBP33.39■■■□□ 2.94
SAMD1-202ENST00000533683 TACC3Q9Y6A5 838 aa33.39■■■□□ 2.94
SAMD1-202ENST00000533683 CHD4Q14839 1912 aa33.39■■■□□ 2.94
SAMD1-202ENST00000533683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.38■■■□□ 2.93
SAMD1-202ENST00000533683 TDO2P48775 406 aa33.38■■■□□ 2.93
SAMD1-202ENST00000533683 TSPY26PQ9H489 355 aa33.38■■■□□ 2.93
SAMD1-202ENST00000533683 RTN4Q9NQC3 1192 aaKnown RBP33.38■■■□□ 2.93
SAMD1-202ENST00000533683 CACNA1SQ13698 1873 aa33.38■■■□□ 2.93
SAMD1-202ENST00000533683 TMEM87BQ96K49 555 aa33.37■■■□□ 2.93
SAMD1-202ENST00000533683 SEMA3EO15041 775 aa33.37■■■□□ 2.93
SAMD1-202ENST00000533683 AKNAD1Q5T1N1 836 aa33.37■■■□□ 2.93
SAMD1-202ENST00000533683 IGDCC4Q8TDY8 1250 aa33.37■■■□□ 2.93
SAMD1-202ENST00000533683 TIAM2Q8IVF5 1701 aa33.36■■■□□ 2.93
SAMD1-202ENST00000533683 TFCP2L1Q9NZI6 479 aa33.36■■■□□ 2.93
SAMD1-202ENST00000533683 CNBD1Q8NA66 436 aa33.36■■■□□ 2.93
SAMD1-202ENST00000533683 UBR3Q6ZT12 1888 aa33.35■■■□□ 2.93
SAMD1-202ENST00000533683 MAGEB6P1A0A0J9YX57 407 aa33.35■■■□□ 2.93
SAMD1-202ENST00000533683 LETM1O95202 739 aaPredicted RBP33.35■■■□□ 2.93
SAMD1-202ENST00000533683 HIBADHP31937 336 aaKnown RBP33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms