RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 PODNQ7Z5L7 613 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 CCDC17Q96LX7 622 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 TSG101Q99816 390 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 C21orf2O43822 256 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 NT5C2P49902 561 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 G2E3Q7L622 706 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 JAG2Q9Y219 1238 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 NAPAP54920 295 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 PPP2R5BQ15173 497 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 SLC4A8Q2Y0W8 1093 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 LIMCH1Q9UPQ0 1083 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 MICU3Q86XE3 530 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 ARHGAP23Q9P227 1491 aa13.43□□□□□ -0.26
CSRP1-215ENST00000532313 CCDC171Q6TFL3 1326 aa13.42□□□□□ -0.26
CSRP1-215ENST00000532313 K7ELQ4 463 aaPredicted RBP13.42□□□□□ -0.26
CSRP1-215ENST00000532313 SLC10A4Q96EP9 437 aa13.42□□□□□ -0.26
CSRP1-215ENST00000532313 DHX36Q9H2U1 1008 aaKnown RBP13.42□□□□□ -0.26
CSRP1-215ENST00000532313 GPR108Q9NPR9 543 aa13.42□□□□□ -0.26
CSRP1-215ENST00000532313 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
CSRP1-215ENST00000532313 KCNQ3O43525 872 aa13.42□□□□□ -0.26
CSRP1-215ENST00000532313 USP17L8P0C7I0 530 aa13.42□□□□□ -0.26
CSRP1-215ENST00000532313 SMARCE1Q969G3 411 aa13.42□□□□□ -0.26
CSRP1-215ENST00000532313 BSDC1Q9NW68 430 aaPredicted RBP13.42□□□□□ -0.26
CSRP1-215ENST00000532313 CNTNAP4Q9C0A0 1308 aa13.41□□□□□ -0.26
CSRP1-215ENST00000532313 GOLGA6L3A6NEY3 463 aa13.41□□□□□ -0.26
CSRP1-215ENST00000532313 HOXD10P28358 340 aa13.41□□□□□ -0.26
CSRP1-215ENST00000532313 NUCB1Q02818 461 aa13.41□□□□□ -0.26
CSRP1-215ENST00000532313 CETN1Q12798 172 aa13.41□□□□□ -0.26
CSRP1-215ENST00000532313 IGSF3O75054 1194 aa13.41□□□□□ -0.26
CSRP1-215ENST00000532313 CYP19A1P11511 503 aaPredicted RBP13.41□□□□□ -0.26
CSRP1-215ENST00000532313 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
CSRP1-215ENST00000532313 SAP30BPQ9UHR5 308 aaKnown RBP13.41□□□□□ -0.26
CSRP1-215ENST00000532313 BCORL1Q5H9F3 1711 aa13.41□□□□□ -0.26
CSRP1-215ENST00000532313 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
CSRP1-215ENST00000532313 TIMM10P62072 90 aa13.41□□□□□ -0.26
CSRP1-215ENST00000532313 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
CSRP1-215ENST00000532313 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.41□□□□□ -0.262e-22■■■■■ 279.5
CSRP1-215ENST00000532313 PCP11498 1178 aaKnown RBP13.4□□□□□ -0.26
CSRP1-215ENST00000532313 SLC1A4P43007 532 aa13.4□□□□□ -0.26
CSRP1-215ENST00000532313 GADL1Q6ZQY3 521 aa13.4□□□□□ -0.26
CSRP1-215ENST00000532313 ZNF594Q96JF6 807 aaPredicted RBP13.4□□□□□ -0.26
CSRP1-215ENST00000532313 PDE8BO95263 885 aa13.4□□□□□ -0.26
CSRP1-215ENST00000532313 HEATR3Q7Z4Q2 680 aa13.4□□□□□ -0.26
CSRP1-215ENST00000532313 AATFQ9NY61 560 aaKnown RBP eCLIP13.4□□□□□ -0.26
CSRP1-215ENST00000532313 RBM19Q9Y4C8 960 aaKnown RBP13.4□□□□□ -0.26
CSRP1-215ENST00000532313 TCP10Q12799 353 aa13.4□□□□□ -0.26
CSRP1-215ENST00000532313 SYNE4Q8N205 404 aa13.4□□□□□ -0.26
CSRP1-215ENST00000532313 ZNHIT6Q9NWK9 470 aaKnown RBP13.4□□□□□ -0.26
CSRP1-215ENST00000532313 PRKAG2Q9UGJ0 569 aa13.4□□□□□ -0.26
CSRP1-215ENST00000532313 PNMA8AQ86V59 439 aaPredicted RBP13.4□□□□□ -0.26
CSRP1-215ENST00000532313 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.26
CSRP1-215ENST00000532313 TGFB2P61812 414 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 FNBP4Q8N3X1 1017 aaPredicted RBP13.39□□□□□ -0.27
CSRP1-215ENST00000532313 FERMT2Q96AC1 680 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 TMEM87BQ96K49 555 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 CRAMP1Q96RY5 1269 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 RICTORQ6R327 1708 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 MMP14P50281 582 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 ANAPC15P60006 121 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 EZH2Q15910 746 aaKnown RBP13.39□□□□□ -0.27
CSRP1-215ENST00000532313 CCDC82Q8N4S0 544 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 SLC26A6Q9BXS9 759 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 ORC3Q9UBD5 711 aaPredicted RBP13.39□□□□□ -0.27
CSRP1-215ENST00000532313 KLF18A0A0U1RQI7 1052 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 TCP10L2B9ZVM9 353 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 KCNQ2O43526 872 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 LPXNO60711 386 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 TBCAO75347 108 aaKnown RBP13.39□□□□□ -0.27
CSRP1-215ENST00000532313 KCNQ4P56696 695 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 CCDC173Q0VFZ6 552 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 STYK1Q6J9G0 422 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 SP8Q8IXZ3 490 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 GTPBP4Q9BZE4 634 aaKnown RBP13.39□□□□□ -0.27
CSRP1-215ENST00000532313 MAP3K9P80192 1104 aa13.39□□□□□ -0.27
CSRP1-215ENST00000532313 GZF1Q9H116 711 aaPredicted RBP13.39□□□□□ -0.27
CSRP1-215ENST00000532313 M0QZ92 97 aa13.38□□□□□ -0.27
CSRP1-215ENST00000532313 SPATA32Q96LK8 384 aa13.38□□□□□ -0.27
CSRP1-215ENST00000532313 UBA7P41226 1012 aa13.38□□□□□ -0.27
CSRP1-215ENST00000532313 BMS1Q14692 1282 aaKnown RBP13.38□□□□□ -0.27
CSRP1-215ENST00000532313 RAD17O75943 681 aa13.38□□□□□ -0.27
CSRP1-215ENST00000532313 RBM25P49756 843 aaKnown RBP13.38□□□□□ -0.27
CSRP1-215ENST00000532313 KBTBD3Q8NAB2 608 aa13.38□□□□□ -0.27
CSRP1-215ENST00000532313 DEPDC5O75140 1603 aa13.38□□□□□ -0.27
CSRP1-215ENST00000532313 NOP56O00567 594 aaKnown RBP13.38□□□□□ -0.27
CSRP1-215ENST00000532313 DBNDD2Q9BQY9 259 aa13.38□□□□□ -0.27
CSRP1-215ENST00000532313 HACL1Q9UJ83 578 aa13.38□□□□□ -0.27
CSRP1-215ENST00000532313 SDSP20132 328 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 BEND3Q5T5X7 828 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 TGFBRAP1Q8WUH2 860 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 SCAND2PQ9GZW5 306 aaPredicted RBP13.37□□□□□ -0.27
CSRP1-215ENST00000532313 LRRIQ1Q96JM4 1722 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 ZEB2O60315 1214 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 GREM2Q9H772 168 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 COPRSQ9NQ92 184 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 KCNG1Q9UIX4 513 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 PRC1O43663 620 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
CSRP1-215ENST00000532313 PDE4CQ08493 712 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms