RNA–Protein interactions for RNA: ENST00000531695.1

CHD7-210, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-210ENST00000531695 UPF3BQ9BZI7 483 aaKnown RBP6.93□□□□□ -1.3
CHD7-210ENST00000531695 TSPY26PQ9H489 355 aa6.93□□□□□ -1.3
CHD7-210ENST00000531695 DDX21Q9NR30 783 aaKnown RBP eCLIP6.93□□□□□ -1.3
CHD7-210ENST00000531695 GRM8O00222 908 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 RRP9O43818 475 aaKnown RBP6.92□□□□□ -1.3
CHD7-210ENST00000531695 F13A1P00488 732 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 GCP02774 474 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 NCLP19338 710 aaKnown RBP6.92□□□□□ -1.3
CHD7-210ENST00000531695 EIF2S2P20042 333 aaKnown RBP6.92□□□□□ -1.3
CHD7-210ENST00000531695 ST3GAL1Q11201 340 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 SCARF1Q14162 830 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 TSGA10IPQ3SY00 556 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 C1orf141Q5JVX7 400 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 CCDC183Q5T5S1 534 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 KIAA1211Q6ZU35 1233 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 GPKOWQ92917 476 aaPredicted RBP eCLIP6.92□□□□□ -1.3
CHD7-210ENST00000531695 ITPKCQ96DU7 683 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 FUCA2Q9BTY2 467 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 CCDC39Q9UFE4 941 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 MTMR6Q9Y217 621 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 MAP3K2Q9Y2U5 619 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 ATP6V1DQ9Y5K8 247 aa6.92□□□□□ -1.3
CHD7-210ENST00000531695 DDX60Q8IY21 1712 aaKnown RBP6.92□□□□□ -1.3
CHD7-210ENST00000531695 STX6O43752 255 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 GADD45BO75293 160 aaPredicted RBP6.91□□□□□ -1.3
CHD7-210ENST00000531695 SASH1O94885 1247 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 DDX58O95786 925 aaKnown RBP6.91□□□□□ -1.3
CHD7-210ENST00000531695 SYT1P21579 422 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 MSNP26038 577 aaKnown RBP6.91□□□□□ -1.3
CHD7-210ENST00000531695 UBE2HP62256 183 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 PTH1RQ03431 593 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 PSME1Q06323 249 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 CSPP1Q1MSJ5 1256 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 PROSER3Q2NL68 480 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 MPRIPQ6WCQ1 1025 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 LRP10Q7Z4F1 713 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 USP48Q86UV5 1035 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 ANKRD24Q8TF21 1146 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 MAP4K1Q92918 833 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 LRRC59Q96AG4 307 aaKnown RBP6.91□□□□□ -1.3
CHD7-210ENST00000531695 SUCLG2Q96I99 432 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 CHAMP1Q96JM3 812 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 DIAPH3Q9NSV4 1193 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 ELP1O95163 1332 aa6.91□□□□□ -1.3
CHD7-210ENST00000531695 SHANK3Q9BYB0 1731 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 STRCP1A6NGW2 1772 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 ZIC2O95409 532 aaPredicted RBP6.9□□□□□ -1.3
CHD7-210ENST00000531695 LARGE1O95461 756 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 RABL6Q3YEC7 729 aaPredicted RBP6.9□□□□□ -1.3
CHD7-210ENST00000531695 USPL1Q5W0Q7 1092 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 LARP1Q6PKG0 1096 aaKnown RBP6.9□□□□□ -1.3
CHD7-210ENST00000531695 CWC27Q6UX04 472 aaKnown RBP6.9□□□□□ -1.3
CHD7-210ENST00000531695 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 ZSCAN1Q8NBB4 408 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 UBE2Q2Q8WVN8 375 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 PURBQ96QR8 312 aaKnown RBP6.9□□□□□ -1.3
CHD7-210ENST00000531695 ZFAND3Q9H8U3 227 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 COPRSQ9NQ92 184 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 PDRG1Q9NUG6 133 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 C9orf78Q9NZ63 289 aaPredicted RBP6.9□□□□□ -1.3
CHD7-210ENST00000531695 HMG20BQ9P0W2 317 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 SMC3Q9UQE7 1217 aa6.9□□□□□ -1.3
CHD7-210ENST00000531695 MEGF6O75095 1541 aa6.9□□□□□ -1.31
CHD7-210ENST00000531695 NEURL1BA8MQ27 555 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 SLC27A2O14975 620 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 MAP4K4O95819 1239 aaPredicted RBP6.89□□□□□ -1.31
CHD7-210ENST00000531695 ANXA1P04083 346 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 IGKV5-2P06315 115 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 IFIT2P09913 472 aaKnown RBP6.89□□□□□ -1.31
CHD7-210ENST00000531695 CASTP20810 708 aaKnown RBP6.89□□□□□ -1.31
CHD7-210ENST00000531695 PSMA5P28066 241 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 RFX5P48382 616 aaPredicted RBP6.89□□□□□ -1.31
CHD7-210ENST00000531695 NMIQ13287 307 aaPredicted RBP6.89□□□□□ -1.31
CHD7-210ENST00000531695 ANKRD1Q15327 319 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 ADCK5Q3MIX3 580 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 ESCO1Q5FWF5 840 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 CREB3L3Q68CJ9 461 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 AACSQ86V21 672 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 EAF2Q96CJ1 260 aaPredicted RBP6.89□□□□□ -1.31
CHD7-210ENST00000531695 METTL22Q9BUU2 404 aaPredicted RBP6.89□□□□□ -1.31
CHD7-210ENST00000531695 BICC1Q9H694 974 aaKnown RBP6.89□□□□□ -1.31
CHD7-210ENST00000531695 SLC52A2Q9HAB3 445 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 SPG7Q9UQ90 795 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 CNPY2Q9Y2B0 182 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 RBM8AQ9Y5S9 174 aaKnown RBP6.89□□□□□ -1.31
CHD7-210ENST00000531695 CYP46A1Q9Y6A2 500 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 NPHP3Q7Z494 1330 aa6.89□□□□□ -1.31
CHD7-210ENST00000531695 MYH7P12883 1935 aa6.88□□□□□ -1.31
CHD7-210ENST00000531695 ABCA3Q99758 1704 aa6.88□□□□□ -1.31
CHD7-210ENST00000531695 CPDO75976 1380 aa6.88□□□□□ -1.31
CHD7-210ENST00000531695 PALLDQ8WX93 1383 aa6.88□□□□□ -1.31
CHD7-210ENST00000531695 SOS2Q07890 1332 aaPredicted RBP6.88□□□□□ -1.31
CHD7-210ENST00000531695 FAM181BA6NEQ2 426 aa6.88□□□□□ -1.31
CHD7-210ENST00000531695 ZKSCAN1P17029 563 aaPredicted RBP6.88□□□□□ -1.31
CHD7-210ENST00000531695 ATP5JP18859 108 aa6.88□□□□□ -1.31
CHD7-210ENST00000531695 PDCP20941 246 aa6.88□□□□□ -1.31
CHD7-210ENST00000531695 GJB2P29033 226 aa6.88□□□□□ -1.31
CHD7-210ENST00000531695 CLK2P49760 499 aaKnown RBP6.88□□□□□ -1.31
CHD7-210ENST00000531695 G3BP1Q13283 466 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHD7-210ENST00000531695 OS9Q13438 667 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms