RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 STK24Q9Y6E0 443 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 LDHBP07195 334 aaKnown RBP9.62□□□□□ -0.87
CTNND1-225ENST00000530094 NAPAP54920 295 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 KLHDC4Q8TBB5 520 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 LARP6Q9BRS8 491 aaKnown RBP9.62□□□□□ -0.87
CTNND1-225ENST00000530094 ATP7BP35670 1465 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 MAST3O60307 1309 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 TUBB4AP04350 444 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 HSPA1LP34931 641 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 SYKP43405 635 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 NOP2P46087 812 aaKnown RBP9.61□□□□□ -0.87
CTNND1-225ENST00000530094 ZNF408Q9H9D4 720 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 NUCB1Q02818 461 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 HEATR3Q7Z4Q2 680 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 ALG1Q9BT22 464 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 SELENOOQ9BVL4 669 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 RAD50Q92878 1312 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 TAF5LO75529 589 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 USPL1Q5W0Q7 1092 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 VTI1AQ96AJ9 217 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 CLTCL1P53675 1640 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 IQGAP3Q86VI3 1631 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 BICDL2A1A5D9 508 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 PSMA7O14818 248 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 RLBP1P12271 317 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 GNA11P29992 359 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 KIAA0753Q2KHM9 967 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 CEP152O94986 1710 aa9.61□□□□□ -0.87
CTNND1-225ENST00000530094 CRKLP46109 303 aaKnown RBP9.6□□□□□ -0.87
CTNND1-225ENST00000530094 RRAGBQ5VZM2 374 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 TMC6Q7Z403 805 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 EIF6P56537 245 aaKnown RBP9.6□□□□□ -0.87
CTNND1-225ENST00000530094 SPECC1LQ69YQ0 1117 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 TTLL7Q6ZT98 887 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 TTC6Q86TZ1 520 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 MAGEB6Q8N7X4 407 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 PAG1Q9NWQ8 432 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 RNF113AO15541 343 aaKnown RBP9.6□□□□□ -0.87
CTNND1-225ENST00000530094 GIGYF1O75420 1035 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-225ENST00000530094 PPP1R2P41236 205 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 CEP85Q6P2H3 762 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 CCDC155Q8N6L0 562 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 SPAG5Q96R06 1193 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 DENND2AQ9ULE3 1009 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 DIP2CQ9Y2E4 1556 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 PTPRMP28827 1452 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 ANKARQ7Z5J8 1434 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 N4BP3O15049 544 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 CCDC175P0C221 793 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 SPECC1Q5M775 1068 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 GLT8D2Q9H1C3 349 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 ZSCAN22P10073 491 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-225ENST00000530094 TIMM10P62072 90 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 KRT79Q5XKE5 535 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 CPLX3Q8WVH0 158 aa9.6□□□□□ -0.87
CTNND1-225ENST00000530094 HIBADHP31937 336 aaKnown RBP9.59□□□□□ -0.87
CTNND1-225ENST00000530094 HLTFQ14527 1009 aaKnown RBP eCLIP9.59□□□□□ -0.875e-6■□□□□ 9.8
CTNND1-225ENST00000530094 TNPO1Q92973 898 aaKnown RBP9.59□□□□□ -0.87
CTNND1-225ENST00000530094 STMN4Q9H169 189 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-225ENST00000530094 ADGRB3O60242 1522 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 CCDC171Q6TFL3 1326 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 RNF17Q9BXT8 1623 aaKnown RBP9.59□□□□□ -0.87
CTNND1-225ENST00000530094 PPFIA3O75145 1194 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 KRT2P35908 639 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 C6orf163Q5TEZ5 329 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 C2CD5Q86YS7 1000 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 ATF5Q9Y2D1 282 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-225ENST00000530094 SYNMO15061 1565 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 EYA2O00167 538 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 PDE6BP35913 854 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 SUPT20HQ8NEM7 779 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 AKR1B10O60218 316 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 PDE1AP54750 535 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 TUBB4BP68371 445 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 TCIRG1Q13488 830 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 MCM9Q9NXL9 1143 aa9.59□□□□□ -0.87
CTNND1-225ENST00000530094 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.879e-8■□□□□ 10.6
CTNND1-225ENST00000530094 POLR3GO15318 223 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-225ENST00000530094 FAM13AO94988 1023 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 ARHGAP27Q6ZUM4 889 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 CEP112Q8N8E3 955 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 MRPS27Q92552 414 aaKnown RBP9.58□□□□□ -0.88
CTNND1-225ENST00000530094 BRF1Q92994 677 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 CCDC77Q9BR77 488 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 TRIM75PA6NK02 468 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 ALDH1B1P30837 517 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 PRPF4BQ13523 1007 aaKnown RBP9.58□□□□□ -0.88
CTNND1-225ENST00000530094 PPIP5K2O43314 1243 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 DKC1O60832 514 aaKnown RBP eCLIP9.58□□□□□ -0.88
CTNND1-225ENST00000530094 GCKRQ14397 625 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 TRMT1LQ7Z2T5 733 aaKnown RBP9.58□□□□□ -0.88
CTNND1-225ENST00000530094 SUCLG2Q96I99 432 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 ZBTB1Q9Y2K1 713 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 CEP83Q9Y592 693 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 ALKQ9UM73 1620 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 A0A1B0GUL7 405 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 ATP2A1O14983 1001 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 TNNT1P13805 278 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms