RNA–Protein interactions for RNA: ENST00000529851.5

APLF-206, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-206ENST00000529851 ST18O60284 1047 aa18.34■□□□□ 0.53
APLF-206ENST00000529851 PHF14O94880 888 aa18.34■□□□□ 0.53
APLF-206ENST00000529851 MPHOSPH8Q99549 860 aa18.34■□□□□ 0.53
APLF-206ENST00000529851 ZNF804BA4D1E1 1349 aa18.34■□□□□ 0.53
APLF-206ENST00000529851 KDM4AO75164 1064 aa18.34■□□□□ 0.53
APLF-206ENST00000529851 NPR1P16066 1061 aa18.34■□□□□ 0.53
APLF-206ENST00000529851 RPS8P62241 208 aaKnown RBP18.34■□□□□ 0.53
APLF-206ENST00000529851 DBNLQ9UJU6 430 aaKnown RBP18.33■□□□□ 0.53
APLF-206ENST00000529851 SLC5A1P13866 664 aa18.33■□□□□ 0.52
APLF-206ENST00000529851 ALDH1B1P30837 517 aa18.33■□□□□ 0.52
APLF-206ENST00000529851 LRRC24Q50LG9 513 aa18.33■□□□□ 0.52
APLF-206ENST00000529851 DHX37Q8IY37 1157 aaKnown RBP18.33■□□□□ 0.52
APLF-206ENST00000529851 SYNE4Q8N205 404 aa18.33■□□□□ 0.52
APLF-206ENST00000529851 CNNM1Q9NRU3 951 aa18.33■□□□□ 0.52
APLF-206ENST00000529851 CC2D2BQ6DHV5 1058 aa18.32■□□□□ 0.52
APLF-206ENST00000529851 PALD1Q9ULE6 856 aa18.32■□□□□ 0.52
APLF-206ENST00000529851 CHMP3Q9Y3E7 222 aa18.32■□□□□ 0.52
APLF-206ENST00000529851 IRS2Q9Y4H2 1338 aa18.32■□□□□ 0.52
APLF-206ENST00000529851 MYH13Q9UKX3 1938 aa18.32■□□□□ 0.52
APLF-206ENST00000529851 BRCA1P38398 1863 aaKnown RBP18.32■□□□□ 0.52
APLF-206ENST00000529851 RAD51AP2Q09MP3 1159 aa18.32■□□□□ 0.52
APLF-206ENST00000529851 KMT5BQ4FZB7 885 aa18.32■□□□□ 0.52
APLF-206ENST00000529851 METTL24Q5JXM2 366 aa18.32■□□□□ 0.52
APLF-206ENST00000529851 A0A1B0GUL7 405 aa18.32■□□□□ 0.52
APLF-206ENST00000529851 COL4A1P02462 1669 aa18.31■□□□□ 0.52
APLF-206ENST00000529851 CCDC158Q5M9N0 1113 aa18.31■□□□□ 0.52
APLF-206ENST00000529851 ZNF592Q92610 1267 aa18.31■□□□□ 0.52
APLF-206ENST00000529851 UPF1Q92900 1129 aaKnown RBP eCLIP18.31■□□□□ 0.52
APLF-206ENST00000529851 RSPH14Q9UHP6 348 aa18.31■□□□□ 0.52
APLF-206ENST00000529851 IFIT1P09914 478 aaKnown RBP18.3■□□□□ 0.52
APLF-206ENST00000529851 PTGS1P23219 599 aa18.3■□□□□ 0.52
APLF-206ENST00000529851 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
APLF-206ENST00000529851 USP48Q86UV5 1035 aa18.3■□□□□ 0.52
APLF-206ENST00000529851 SP8Q8IXZ3 490 aa18.3■□□□□ 0.52
APLF-206ENST00000529851 VPS33BQ9H267 617 aa18.3■□□□□ 0.52
APLF-206ENST00000529851 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
APLF-206ENST00000529851 ZFYP08048 801 aaPredicted RBP18.29■□□□□ 0.52
APLF-206ENST00000529851 TNNT1P13805 278 aa18.29■□□□□ 0.52
APLF-206ENST00000529851 CCDC112Q8NEF3 446 aa18.29■□□□□ 0.52
APLF-206ENST00000529851 MASTLQ96GX5 879 aa18.29■□□□□ 0.52
APLF-206ENST00000529851 PUS3Q9BZE2 481 aaKnown RBP18.29■□□□□ 0.52
APLF-206ENST00000529851 MINPP1Q9UNW1 487 aa18.29■□□□□ 0.52
APLF-206ENST00000529851 SMTNL1A8MU46 457 aa18.29■□□□□ 0.52
APLF-206ENST00000529851 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
APLF-206ENST00000529851 LRMPQ12912 555 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 KLHDC4Q8TBB5 520 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 ZNF594Q96JF6 807 aaPredicted RBP18.28■□□□□ 0.52
APLF-206ENST00000529851 TSPYL1Q9H0U9 437 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 SIL1Q9H173 461 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 ANO2Q9NQ90 1003 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 XDHP47989 1333 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 SNED1Q8TER0 1413 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 REC8O95072 547 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 SRGNP10124 158 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 CHRNDQ07001 517 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 RPGRQ92834 1020 aaKnown RBP18.28■□□□□ 0.52
APLF-206ENST00000529851 XAGE2Q96GT9 111 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 UPF3BQ9BZI7 483 aaKnown RBP18.28■□□□□ 0.52
APLF-206ENST00000529851 PSME4Q14997 1843 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 NPHP1O15259 732 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 BRD1O95696 1058 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 ATP2B4P23634 1241 aa18.28■□□□□ 0.52
APLF-206ENST00000529851 LOC102724159A0A0B4J2E5 919 aa18.27■□□□□ 0.52
APLF-206ENST00000529851 PWP2Q15269 919 aaKnown RBP18.27■□□□□ 0.52
APLF-206ENST00000529851 SYCP1Q15431 976 aa18.27■□□□□ 0.52
APLF-206ENST00000529851 C3orf67Q6ZVT6 689 aa18.27■□□□□ 0.52
APLF-206ENST00000529851 SALL1Q9NSC2 1324 aa18.27■□□□□ 0.52
APLF-206ENST00000529851 MMP10P09238 476 aa18.27■□□□□ 0.51
APLF-206ENST00000529851 CHMLP26374 656 aa18.27■□□□□ 0.51
APLF-206ENST00000529851 MTFR1LQ9H019 292 aa18.27■□□□□ 0.51
APLF-206ENST00000529851 MED23Q9ULK4 1368 aa18.27■□□□□ 0.51
APLF-206ENST00000529851 NEK4P51957 841 aa18.26■□□□□ 0.51
APLF-206ENST00000529851 SEC31BQ9NQW1 1179 aa18.26■□□□□ 0.51
APLF-206ENST00000529851 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.26■□□□□ 0.51
APLF-206ENST00000529851 ZSCAN25Q6NSZ9 544 aa18.26■□□□□ 0.51
APLF-206ENST00000529851 BICDL1Q6ZP65 573 aa18.26■□□□□ 0.51
APLF-206ENST00000529851 FBXO33Q7Z6M2 555 aa18.26■□□□□ 0.51
APLF-206ENST00000529851 KBTBD3Q8NAB2 608 aa18.26■□□□□ 0.51
APLF-206ENST00000529851 TMX3Q96JJ7 454 aa18.26■□□□□ 0.51
APLF-206ENST00000529851 DBNDD2Q9BQY9 259 aa18.26■□□□□ 0.51
APLF-206ENST00000529851 NOL10Q9BSC4 688 aaKnown RBP18.26■□□□□ 0.51
APLF-206ENST00000529851 TGFB2P61812 414 aa18.25■□□□□ 0.51
APLF-206ENST00000529851 GIMAP6Q6P9H5 292 aa18.25■□□□□ 0.51
APLF-206ENST00000529851 FBXO38Q6PIJ6 1188 aa18.25■□□□□ 0.51
APLF-206ENST00000529851 GTF3C6Q969F1 213 aa18.25■□□□□ 0.51
APLF-206ENST00000529851 GNL3LQ9NVN8 582 aaKnown RBP18.25■□□□□ 0.51
APLF-206ENST00000529851 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
APLF-206ENST00000529851 CYP2C19P33261 490 aa18.25■□□□□ 0.51
APLF-206ENST00000529851 ZNF397Q8NF99 534 aaPredicted RBP18.25■□□□□ 0.51
APLF-206ENST00000529851 CNKSR1Q969H4 720 aa18.25■□□□□ 0.51
APLF-206ENST00000529851 ARFGEF1Q9Y6D6 1849 aa18.25■□□□□ 0.51
APLF-206ENST00000529851 RPAP1Q9BWH6 1393 aaPredicted RBP18.25■□□□□ 0.51
APLF-206ENST00000529851 ZNF646O15015 1829 aaPredicted RBP18.25■□□□□ 0.51
APLF-206ENST00000529851 TAF1P21675 1872 aa18.24■□□□□ 0.51
APLF-206ENST00000529851 CCDC183Q5T5S1 534 aa18.24■□□□□ 0.51
APLF-206ENST00000529851 RTFDC1Q9BY42 306 aaPredicted RBP18.24■□□□□ 0.51
APLF-206ENST00000529851 HELLSQ9NRZ9 838 aa18.24■□□□□ 0.51
APLF-206ENST00000529851 ANAPC15P60006 121 aa18.24■□□□□ 0.51
APLF-206ENST00000529851 ESYT1Q9BSJ8 1104 aa18.24■□□□□ 0.51
APLF-206ENST00000529851 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms