RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 CERS5Q8N5B7 392 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 CCDC191Q8NCU4 936 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 SH3TC2Q8TF17 1288 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 ARMC5Q96C12 935 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 PTPN18Q99952 460 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 COA1Q9GZY4 146 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 ELP3Q9H9T3 547 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 MAP3K2Q9Y2U5 619 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 PTCH2Q9Y6C5 1203 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 MYO3BQ8WXR4 1341 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 PPP1R12BO60237 982 aaPredicted RBP4.55□□□□□ -1.68
PTPRC-213ENST00000529828 IGKV5-2P06315 115 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 ZBTB48P10074 688 aaPredicted RBP4.55□□□□□ -1.68
PTPRC-213ENST00000529828 HSP90B1P14625 803 aaKnown RBP4.55□□□□□ -1.68
PTPRC-213ENST00000529828 KCNJ4P48050 445 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 SP3Q02447 781 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 CWF19L2Q2TBE0 894 aaKnown RBP4.55□□□□□ -1.68
PTPRC-213ENST00000529828 SLC9C1Q4G0N8 1177 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 TTLL11Q8NHH1 800 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 ZBED3Q96IU2 234 aaPredicted RBP4.55□□□□□ -1.68
PTPRC-213ENST00000529828 ZNF333Q96JL9 665 aa4.55□□□□□ -1.68
PTPRC-213ENST00000529828 METTL22Q9BUU2 404 aaPredicted RBP4.55□□□□□ -1.68
PTPRC-213ENST00000529828 BSDC1Q9NW68 430 aaPredicted RBP4.55□□□□□ -1.68
PTPRC-213ENST00000529828 ZNF804BA4D1E1 1349 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 TAF5LO75529 589 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 IGHMBP2P38935 993 aaKnown RBP4.54□□□□□ -1.68
PTPRC-213ENST00000529828 RBM5P52756 815 aaKnown RBP eCLIP4.54□□□□□ -1.68
PTPRC-213ENST00000529828 CFAP100Q494V2 611 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 UBE3BQ7Z3V4 1068 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 C8orf58Q8NAV2 365 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 HELBQ8NG08 1087 aaPredicted RBP4.54□□□□□ -1.68
PTPRC-213ENST00000529828 OPTNQ96CV9 577 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 ARHGAP39Q9C0H5 1083 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 PLA2G2EQ9NZK7 142 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 LAMA2P24043 3122 aaKnown RBP4.54□□□□□ -1.68
PTPRC-213ENST00000529828 SPTBN5Q9NRC6 3674 aaKnown RBP4.54□□□□□ -1.68
PTPRC-213ENST00000529828 PI4KAP2A4QPH2 592 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 USP2O75604 605 aaPredicted RBP4.54□□□□□ -1.68
PTPRC-213ENST00000529828 ITGA6P23229 1130 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 IREB2P48200 963 aaKnown RBP4.54□□□□□ -1.68
PTPRC-213ENST00000529828 INHBEP58166 350 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 RASA3Q14644 834 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 WDR43Q15061 677 aaKnown RBP eCLIP4.54□□□□□ -1.68
PTPRC-213ENST00000529828 TAF1CQ15572 869 aaPredicted RBP4.54□□□□□ -1.68
PTPRC-213ENST00000529828 PI4KAP1Q8N8J0 262 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 BRI3BPQ8WY22 251 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 RUNDC1Q96C34 613 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 PRMT6Q96LA8 375 aaPredicted RBP4.54□□□□□ -1.68
PTPRC-213ENST00000529828 CD209Q9NNX6 404 aa4.54□□□□□ -1.68
PTPRC-213ENST00000529828 ZSWIM8A7E2V4 1837 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 EYSQ5T1H1 3165 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 COL1A1P02452 1464 aaPredicted RBP4.53□□□□□ -1.68
PTPRC-213ENST00000529828 RBBP6Q7Z6E9 1792 aaKnown RBP4.53□□□□□ -1.68
PTPRC-213ENST00000529828 CCL15-CCL14A0A0B4J2E2 113 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 DDX58O95786 925 aaKnown RBP4.53□□□□□ -1.68
PTPRC-213ENST00000529828 CHRM1P11229 460 aaPredicted RBP4.53□□□□□ -1.68
PTPRC-213ENST00000529828 PSEN1P49768 467 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 CHRNDQ07001 517 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 MAP3K11Q16584 847 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 CCL15Q16663 113 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 OTUD7BQ6GQQ9 843 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 FAM43AQ8N2R8 423 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 TSPYL6Q8N831 410 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 MPHOSPH8Q99549 860 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 RBM27Q9P2N5 1060 aaKnown RBP4.53□□□□□ -1.68
PTPRC-213ENST00000529828 ADAMTS8Q9UP79 889 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 LEMD3Q9Y2U8 911 aa4.53□□□□□ -1.68
PTPRC-213ENST00000529828 OTOFQ9HC10 1997 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 NEURL1BA8MQ27 555 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 TCP10L2B9ZVM9 353 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 MYO1BO43795 1136 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 VGLL4Q14135 290 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 MTFR1Q15390 333 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 SUPT20HL1Q3ZLR7 823 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 G2E3Q7L622 706 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 ANKRD13AQ8IZ07 590 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 DPF3Q92784 378 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 SHISA4Q96DD7 197 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 MS4A4AQ96JQ5 239 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 ANKRD2Q9GZV1 360 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 DLL1O00548 723 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 APAF1O14727 1248 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 PLIN1O60240 522 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 ZNF853P0CG23 659 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 CACNB3P54284 484 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 NEXNQ0ZGT2 675 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 KSR2Q6VAB6 950 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.52□□□□□ -1.69
PTPRC-213ENST00000529828 NBPF11Q86T75 865 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 TSR2Q969E8 191 aaKnown RBP4.52□□□□□ -1.69
PTPRC-213ENST00000529828 TMEM39BQ9GZU3 492 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 TDRD3Q9H7E2 651 aaKnown RBP4.52□□□□□ -1.69
PTPRC-213ENST00000529828 ZFYVE28Q9HCC9 887 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 IFT57Q9NWB7 429 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 HCSTQ9UBK5 93 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 CHMP3Q9Y3E7 222 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 PPP2R3BQ9Y5P8 575 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 IRS2Q9Y4H2 1338 aa4.52□□□□□ -1.69
PTPRC-213ENST00000529828 TESPA1A2RU30 521 aaPredicted RBP4.51□□□□□ -1.69
PTPRC-213ENST00000529828 GNAI1P63096 354 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms