RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 MB21D2Q8IYB1 491 aaPredicted RBP18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 RBM17Q96I25 401 aaKnown RBP18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 RAI14Q9P0K7 980 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 LEMD3Q9Y2U8 911 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 XDHP47989 1333 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 ZBTB22O15209 634 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 TBC1D10CQ8IV04 446 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 IFNL3Q8IZI9 196 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 NLGN1Q8N2Q7 840 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 FBXL16Q8N461 479 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 MIGA1Q8NAN2 632 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 RGPD3A6NKT7 1758 aaPredicted RBP18.27■□□□□ 0.52
CCDC90B-213ENST00000529611 RGPD4Q7Z3J3 1758 aa18.27■□□□□ 0.52
CCDC90B-213ENST00000529611 GSG1L2A8MUP6 293 aa18.27■□□□□ 0.52
CCDC90B-213ENST00000529611 HOXA10P31260 410 aaPredicted RBP18.27■□□□□ 0.52
CCDC90B-213ENST00000529611 APOBRQ0VD83 1088 aa18.27■□□□□ 0.52
CCDC90B-213ENST00000529611 NCOA7Q8NI08 942 aa18.27■□□□□ 0.52
CCDC90B-213ENST00000529611 PRKAB2O43741 272 aa18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 ZSCAN22P10073 491 aaPredicted RBP18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 GNAT2P19087 354 aa18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 SKOR2Q2VWA4 1001 aaPredicted RBP18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 FLAD1Q8NFF5 587 aa18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 ZNF384Q8TF68 577 aa18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 LMBRD1Q9NUN5 540 aa18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 NRXN2Q9P2S2 1712 aa18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 PFKFB2O60825 505 aa18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 MCM5P33992 734 aa18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 RALYLQ86SE5 291 aaKnown RBP18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 NAPBQ9H115 298 aa18.26■□□□□ 0.51
CCDC90B-213ENST00000529611 ANKRD31Q8N7Z5 1873 aa18.25■□□□□ 0.51
CCDC90B-213ENST00000529611 ANTXR2P58335 489 aa18.25■□□□□ 0.51
CCDC90B-213ENST00000529611 GPSM2P81274 684 aa18.25■□□□□ 0.51
CCDC90B-213ENST00000529611 SCRN1Q12765 414 aa18.25■□□□□ 0.51
CCDC90B-213ENST00000529611 SLC4A4Q9Y6R1 1079 aa18.25■□□□□ 0.51
CCDC90B-213ENST00000529611 PRC1O43663 620 aa18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 BBOX1O75936 387 aa18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 CRAMP1Q96RY5 1269 aa18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 RIOK1Q9BRS2 568 aaKnown RBP18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 GPHNQ9NQX3 736 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 MTMR6Q9Y217 621 aa18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 WDR19Q8NEZ3 1342 aa18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 EVCP57679 992 aa18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 NAA16Q6N069 864 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 C15orf52Q6ZUT6 534 aaKnown RBP18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 NSUN4Q96CB9 384 aaKnown RBP18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 ZNF274Q96GC6 653 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 GZF1Q9H116 711 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-213ENST00000529611 MAGEB6P1A0A0J9YX57 407 aa18.23■□□□□ 0.51
CCDC90B-213ENST00000529611 F13A1P00488 732 aa18.23■□□□□ 0.51
CCDC90B-213ENST00000529611 TRDNQ13061 729 aa18.23■□□□□ 0.51
CCDC90B-213ENST00000529611 NKX2-3Q8TAU0 364 aa18.23■□□□□ 0.51
CCDC90B-213ENST00000529611 BRIP1Q9BX63 1249 aa18.23■□□□□ 0.51
CCDC90B-213ENST00000529611 NACAP1Q9BZK3 213 aa18.23■□□□□ 0.51
CCDC90B-213ENST00000529611 TIAM2Q8IVF5 1701 aa18.23■□□□□ 0.51
CCDC90B-213ENST00000529611 JAK2O60674 1132 aa18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 PRDX5P30044 214 aa18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 PDIA3P30101 505 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 LARP1BQ659C4 914 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 GPR101Q96P66 508 aaPredicted RBP18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 NSFL1CQ9UNZ2 370 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 NEDD4P46934 1319 aa18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 PRPF40AO75400 957 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 TDO2P48775 406 aa18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 MECOMQ03112 1051 aa18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 KLHL40Q2TBA0 621 aa18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 TDRD7Q8NHU6 1098 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-213ENST00000529611 UFL1O94874 794 aa18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 MMP10P09238 476 aa18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 PDIA4P13667 645 aaKnown RBP18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 PDCP20941 246 aa18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 ATP2B4P23634 1241 aa18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 FOXD4L6Q3SYB3 417 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 FOXD4L3Q6VB84 417 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 SMARCC2Q8TAQ2 1214 aa18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 LLPHQ9BRT6 129 aaKnown RBP18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 GGA1Q9UJY5 639 aa18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 JAG2Q9Y219 1238 aa18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 DDX49Q9Y6V7 483 aaKnown RBP18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 CHD4Q14839 1912 aa18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 LRRC37AA6NMS7 1700 aa18.21■□□□□ 0.51
CCDC90B-213ENST00000529611 MAST2Q6P0Q8 1798 aa18.21■□□□□ 0.5
CCDC90B-213ENST00000529611 VPS37CA5D8V6 355 aaPredicted RBP18.21■□□□□ 0.5
CCDC90B-213ENST00000529611 DYNLL1P63167 89 aaKnown RBP18.21■□□□□ 0.5
CCDC90B-213ENST00000529611 CTDSPL2Q05D32 466 aa18.21■□□□□ 0.5
CCDC90B-213ENST00000529611 CYB5R4Q7L1T6 521 aa18.21■□□□□ 0.5
CCDC90B-213ENST00000529611 ZNF804AQ7Z570 1209 aa18.21■□□□□ 0.5
CCDC90B-213ENST00000529611 NSUN7Q8NE18 718 aaKnown RBP18.21■□□□□ 0.5
CCDC90B-213ENST00000529611 SDR42E1Q8WUS8 393 aa18.21■□□□□ 0.5
CCDC90B-213ENST00000529611 TACC3Q9Y6A5 838 aa18.21■□□□□ 0.5
CCDC90B-213ENST00000529611 SALL1Q9NSC2 1324 aa18.2■□□□□ 0.5
CCDC90B-213ENST00000529611 B4E1Z4 1266 aa18.2■□□□□ 0.5
CCDC90B-213ENST00000529611 CTDNEP1O95476 244 aa18.2■□□□□ 0.5
CCDC90B-213ENST00000529611 CCT2P78371 535 aaKnown RBP18.2■□□□□ 0.5
CCDC90B-213ENST00000529611 LTBP1Q14766 1721 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 TCHHQ07283 1943 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 SRGNP10124 158 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 AKNAD1Q5T1N1 836 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 TMC4Q7Z404 712 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms