RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 FAM227BQ96M60 508 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 TFIP11Q9UBB9 837 aaKnown RBP5.39□□□□□ -1.55
CASP4-207ENST00000529565 ATP10DQ9P241 1426 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 ITSN1Q15811 1721 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 H7C1W4 665 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 MTX1Q13505 466 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 RAB3GAP1Q15042 981 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 CCDC102BQ68D86 513 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 SEPT12Q8IYM1 358 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 MPNDQ8N594 471 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 C6orf50Q9HD87 102 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 SOS2Q07890 1332 aaPredicted RBP5.39□□□□□ -1.55
CASP4-207ENST00000529565 PTPDC1A2A3K4 754 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 UBA7P41226 1012 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 APOBRQ0VD83 1088 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 TTLL12Q14166 644 aaPredicted RBP5.39□□□□□ -1.55
CASP4-207ENST00000529565 CNKSR1Q969H4 720 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 RRP36Q96EU6 259 aaKnown RBP5.39□□□□□ -1.55
CASP4-207ENST00000529565 SH2D4AQ9H788 454 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 ANGEL1Q9UNK9 670 aaKnown RBP5.39□□□□□ -1.55
CASP4-207ENST00000529565 LEMD3Q9Y2U8 911 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 ZNF532Q9HCE3 1301 aa5.39□□□□□ -1.55
CASP4-207ENST00000529565 PRAMEF22A3QJZ6 481 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 PPP1R12BO60237 982 aaPredicted RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 RPS6KA4O75676 772 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 GSPT1P15170 499 aaKnown RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 STX1AQ16623 288 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 CCAR2Q8N163 923 aaKnown RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 MPHOSPH6Q99547 160 aaKnown RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 TSG101Q99816 390 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 ARMT1Q9H993 441 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 VAT1LQ9HCJ6 419 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 PATL2C9JE40 543 aaKnown RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 GNA11P29992 359 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 GPS2Q13227 327 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 UBE3CQ15386 1083 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 CAMK4Q16566 473 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 UVSSAQ2YD98 709 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 HOOK2Q96ED9 719 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 GREM2Q9H772 168 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 ARHGEF28Q8N1W1 1705 aaKnown RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 TRIM75PA6NK02 468 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 NF2P35240 595 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 NAP1L1P55209 391 aaKnown RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 CHRNDQ07001 517 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 SYCP1Q15431 976 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 CCDC129Q6ZRS4 1044 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 RAB11FIP4Q86YS3 637 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 MNS1Q8NEH6 495 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 NAP1L4Q99733 375 aaKnown RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 GTPBP4Q9BZE4 634 aaKnown RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 CPDO75976 1380 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 BBOX1O75936 387 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 PCP11498 1178 aaKnown RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 LRRC24Q50LG9 513 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 CT47A1Q5JQC4 288 aaPredicted RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 TMED8Q6PL24 325 aaPredicted RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 ERMNQ8TAM6 284 aa5.38□□□□□ -1.55
CASP4-207ENST00000529565 MRPS27Q92552 414 aaKnown RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 ARPP21Q9UBL0 812 aaPredicted RBP5.38□□□□□ -1.55
CASP4-207ENST00000529565 NAPAP54920 295 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 C1QBPQ07021 282 aaKnown RBP5.37□□□□□ -1.55
CASP4-207ENST00000529565 VPS72Q15906 364 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 RGS22Q8NE09 1264 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 CERKQ8TCT0 537 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 LZTS2Q9BRK4 669 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 TANGO6Q9C0B7 1094 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 GLT8D2Q9H1C3 349 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 RMND1Q9NWS8 449 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 XDHP47989 1333 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 AFF2P51816 1311 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 CDHR2Q9BYE9 1310 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 B4E1Z4 1266 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 DEXIO95424 95 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 PARP1P09874 1014 aaKnown RBP5.37□□□□□ -1.55
CASP4-207ENST00000529565 KRT2P35908 639 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 SYKP43405 635 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 TRIM28Q13263 835 aaKnown RBP5.37□□□□□ -1.55
CASP4-207ENST00000529565 MKRN4PQ13434 485 aaPredicted RBP5.37□□□□□ -1.55
CASP4-207ENST00000529565 STXBP4Q6ZWJ1 553 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 HEATR3Q7Z4Q2 680 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.37□□□□□ -1.55
CASP4-207ENST00000529565 VEZTQ9HBM0 779 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 TRIM37O94972 964 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 PDE6AP16499 860 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 PTPN12Q05209 780 aaKnown RBP5.37□□□□□ -1.55
CASP4-207ENST00000529565 SLC4A8Q2Y0W8 1093 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 PPP4R3AQ6IN85 833 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.37□□□□□ -1.55
CASP4-207ENST00000529565 LARGE2Q8N3Y3 721 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 SPC24Q8NBT2 197 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 GDPD2Q9HCC8 539 aa5.37□□□□□ -1.55
CASP4-207ENST00000529565 ARGLU1Q9NWB6 273 aaPredicted RBP5.37□□□□□ -1.55
CASP4-207ENST00000529565 DBNLQ9UJU6 430 aaKnown RBP5.37□□□□□ -1.55
CASP4-207ENST00000529565 ZNF804BA4D1E1 1349 aa5.36□□□□□ -1.55
CASP4-207ENST00000529565 SPTLC2O15270 562 aa5.36□□□□□ -1.55
CASP4-207ENST00000529565 SERPINB2P05120 415 aa5.36□□□□□ -1.55
CASP4-207ENST00000529565 CFAP100Q494V2 611 aa5.36□□□□□ -1.55
CASP4-207ENST00000529565 AKNAD1Q5T1N1 836 aa5.36□□□□□ -1.55
CASP4-207ENST00000529565 IQSEC2Q5JU85 1478 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms