RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 SPTLC2O15270 562 aa21.95■■□□□ 1.1
TM9SF1-206ENST00000528669 RXRAP19793 462 aa21.95■■□□□ 1.1
TM9SF1-206ENST00000528669 SLC9C2Q5TAH2 1124 aa21.95■■□□□ 1.1
TM9SF1-206ENST00000528669 AIFM3Q96NN9 605 aa21.95■■□□□ 1.1
TM9SF1-206ENST00000528669 CNNM1Q9NRU3 951 aa21.95■■□□□ 1.1
TM9SF1-206ENST00000528669 TTLL11Q8NHH1 800 aa21.94■■□□□ 1.1
TM9SF1-206ENST00000528669 KCNG4Q8TDN1 519 aa21.94■■□□□ 1.1
TM9SF1-206ENST00000528669 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.94■■□□□ 1.1
TM9SF1-206ENST00000528669 POLR3EQ9NVU0 708 aa21.94■■□□□ 1.1
TM9SF1-206ENST00000528669 AKAP11Q9UKA4 1901 aa21.94■■□□□ 1.1
TM9SF1-206ENST00000528669 MYO5AQ9Y4I1 1855 aaKnown RBP21.94■■□□□ 1.1
TM9SF1-206ENST00000528669 APPP05067 770 aa21.94■■□□□ 1.1
TM9SF1-206ENST00000528669 ADD2P35612 726 aa21.94■■□□□ 1.1
TM9SF1-206ENST00000528669 DPCR1Q3MIW9 517 aa21.94■■□□□ 1.1
TM9SF1-206ENST00000528669 TBC1D10CQ8IV04 446 aa21.94■■□□□ 1.1
TM9SF1-206ENST00000528669 KAT6BQ8WYB5 2073 aa21.93■■□□□ 1.1
TM9SF1-206ENST00000528669 MAP3K15Q6ZN16 1313 aa21.93■■□□□ 1.1
TM9SF1-206ENST00000528669 USP27XA6NNY8 438 aa21.93■■□□□ 1.1
TM9SF1-206ENST00000528669 IDH1O75874 414 aaKnown RBP21.93■■□□□ 1.1
TM9SF1-206ENST00000528669 GIGYF2Q6Y7W6 1299 aaKnown RBP21.93■■□□□ 1.1
TM9SF1-206ENST00000528669 SYNE3Q6ZMZ3 975 aa21.93■■□□□ 1.1
TM9SF1-206ENST00000528669 CYB5R4Q7L1T6 521 aa21.93■■□□□ 1.1
TM9SF1-206ENST00000528669 NLRP10Q86W26 655 aa21.93■■□□□ 1.1
TM9SF1-206ENST00000528669 PIH1D3Q9NQM4 214 aaKnown RBP21.93■■□□□ 1.1
TM9SF1-206ENST00000528669 KIAA1468Q9P260 1216 aa21.93■■□□□ 1.1
TM9SF1-206ENST00000528669 BIN1O00499 593 aa21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 CTIFO43310 598 aaKnown RBP21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 YEATS4O95619 227 aa21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 KIF23Q02241 960 aaPredicted RBP21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 NAT10Q9H0A0 1025 aaKnown RBP21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 XIRP1Q702N8 1843 aaKnown RBP21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 CCDC69A6NI79 296 aa21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 TRDNQ13061 729 aa21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 PPP4R3BQ5MIZ7 849 aa21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 BRAPQ7Z569 592 aa21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 DDX60Q8IY21 1712 aaKnown RBP21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 NEDD4P46934 1319 aa21.92■■□□□ 1.1
TM9SF1-206ENST00000528669 STARD3NLO95772 234 aa21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 SKILP12757 684 aa21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 ZNF592Q92610 1267 aa21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 SENP2Q9HC62 589 aa21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 C4AP0C0L4 1744 aa21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 C4BP0C0L5 1744 aa21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 ABCC12Q96J65 1359 aa21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 ANKRD18BA2A2Z9 1011 aa21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 MARCKSP29966 332 aaPredicted RBP21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 CTSWP56202 376 aa21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 ANO1Q5XXA6 986 aa21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 SOS2Q07890 1332 aaPredicted RBP21.91■■□□□ 1.1
TM9SF1-206ENST00000528669 SMTNL1A8MU46 457 aa21.9■■□□□ 1.1
TM9SF1-206ENST00000528669 ZNF202O95125 648 aa21.9■■□□□ 1.1
TM9SF1-206ENST00000528669 ZRSR1Q15695 479 aaKnown RBP21.9■■□□□ 1.1
TM9SF1-206ENST00000528669 BCL11BQ9C0K0 894 aaPredicted RBP21.9■■□□□ 1.1
TM9SF1-206ENST00000528669 PDCL2Q8N4E4 241 aa21.9■■□□□ 1.1
TM9SF1-206ENST00000528669 TEX13AQ9BXU3 409 aaPredicted RBP21.9■■□□□ 1.1
TM9SF1-206ENST00000528669 ANGEL1Q9UNK9 670 aaKnown RBP21.9■■□□□ 1.1
TM9SF1-206ENST00000528669 ZNF532Q9HCE3 1301 aa21.9■■□□□ 1.1
TM9SF1-206ENST00000528669 B4E1Z4 1266 aa21.89■■□□□ 1.1
TM9SF1-206ENST00000528669 IRS4O14654 1257 aaPredicted RBP21.89■■□□□ 1.1
TM9SF1-206ENST00000528669 PHKA1P46020 1223 aa21.89■■□□□ 1.1
TM9SF1-206ENST00000528669 METAP2P50579 478 aaKnown RBP eCLIP21.89■■□□□ 1.1
TM9SF1-206ENST00000528669 ANKRD7Q92527 254 aa21.89■■□□□ 1.1
TM9SF1-206ENST00000528669 PHKBQ93100 1093 aa21.89■■□□□ 1.1
TM9SF1-206ENST00000528669 ALG1Q9BT22 464 aa21.89■■□□□ 1.1
TM9SF1-206ENST00000528669 INCENPQ9NQS7 918 aa21.89■■□□□ 1.1
TM9SF1-206ENST00000528669 CDHR2Q9BYE9 1310 aa21.89■■□□□ 1.1
TM9SF1-206ENST00000528669 WDHD1O75717 1129 aaPredicted RBP21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 SLC3A2P08195 630 aaKnown RBP21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 RBM6P78332 1123 aaKnown RBP21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 CCZ1BP86790 482 aa21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 CCZ1P86791 482 aaPredicted RBP21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 AXDND1Q5T1B0 1012 aaPredicted RBP21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 ISM2Q6H9L7 571 aa21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 NBPF11Q86T75 865 aa21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 VGLL2Q8N8G2 317 aa21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 TRMT112Q9UI30 125 aaKnown RBP21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 WWC3Q9ULE0 1092 aa21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 MROH7-TTC4A0A0A0MT08 1334 aa21.89■■□□□ 1.09
TM9SF1-206ENST00000528669 NEMFO60524 1076 aa21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 PFKFB1P16118 471 aa21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 CDC27P30260 824 aa21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 MICU3Q86XE3 530 aa21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 HELBQ8NG08 1087 aaPredicted RBP21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 TRMT1Q9NXH9 659 aaKnown RBP21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 ZMYM6O95789 1325 aa21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 WDR19Q8NEZ3 1342 aa21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 SH2B2O14492 632 aaPredicted RBP21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 CEP135Q66GS9 1140 aa21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 CCDC102BQ68D86 513 aa21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 PRDM10Q9NQV6 1147 aa21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 SLAIN2Q9P270 581 aa21.88■■□□□ 1.09
TM9SF1-206ENST00000528669 PDE8BO95263 885 aa21.87■■□□□ 1.09
TM9SF1-206ENST00000528669 PDE6AP16499 860 aa21.87■■□□□ 1.09
TM9SF1-206ENST00000528669 CBX1P83916 185 aa21.87■■□□□ 1.09
TM9SF1-206ENST00000528669 NCBP1Q09161 790 aaKnown RBP21.87■■□□□ 1.09
TM9SF1-206ENST00000528669 NAA30Q147X3 362 aaPredicted RBP21.87■■□□□ 1.09
TM9SF1-206ENST00000528669 TTF1Q15361 905 aaPredicted RBP21.87■■□□□ 1.09
TM9SF1-206ENST00000528669 SLC4A9Q96Q91 983 aa21.87■■□□□ 1.09
TM9SF1-206ENST00000528669 MYL10Q9BUA6 226 aa21.87■■□□□ 1.09
TM9SF1-206ENST00000528669 SMC2O95347 1197 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms