RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	ADD2	P35612	726 aa		27.21	■■□□□ 1.95
GSDMD-208	ENST00000528475	SMAP1	Q8IYB5	467 aa	Predicted RBP	27.21	■■□□□ 1.95
GSDMD-208	ENST00000528475	AOPEP	Q8N6M6	819 aa		27.21	■■□□□ 1.95
GSDMD-208	ENST00000528475	ABCA3	Q99758	1704 aa		27.21	■■□□□ 1.95
GSDMD-208	ENST00000528475	FAM177B	A6PVY3	158 aa		27.21	■■□□□ 1.95
GSDMD-208	ENST00000528475	KIF23	Q02241	960 aa	Predicted RBP	27.21	■■□□□ 1.95
GSDMD-208	ENST00000528475	TPD52L1	Q16890	204 aa	Predicted RBP	27.21	■■□□□ 1.95
GSDMD-208	ENST00000528475	GIGYF2	Q6Y7W6	1299 aa	Known RBP	27.21	■■□□□ 1.95
GSDMD-208	ENST00000528475	MAP3K15	Q6ZN16	1313 aa		27.2	■■□□□ 1.95
GSDMD-208	ENST00000528475	TTF1	Q15361	905 aa	Predicted RBP	27.2	■■□□□ 1.95
GSDMD-208	ENST00000528475	POLR3D	P05423	398 aa	Predicted RBP	27.2	■■□□□ 1.94
GSDMD-208	ENST00000528475	MCAM	P43121	646 aa		27.2	■■□□□ 1.94
GSDMD-208	ENST00000528475	GSDMD	P57764	484 aa		27.2	■■□□□ 1.94
GSDMD-208	ENST00000528475	METTL24	Q5JXM2	366 aa		27.2	■■□□□ 1.94
GSDMD-208	ENST00000528475	ZMYM6	O95789	1325 aa		27.19	■■□□□ 1.94
GSDMD-208	ENST00000528475	ANO1	Q5XXA6	986 aa		27.19	■■□□□ 1.94
GSDMD-208	ENST00000528475	SYNE3	Q6ZMZ3	975 aa		27.19	■■□□□ 1.94
GSDMD-208	ENST00000528475	PDCL2	Q8N4E4	241 aa		27.19	■■□□□ 1.94
GSDMD-208	ENST00000528475	IMPACT	Q9P2X3	320 aa		27.19	■■□□□ 1.94
GSDMD-208	ENST00000528475	CCZ1B	P86790	482 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	CCZ1	P86791	482 aa	Predicted RBP	27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	PI16	Q6UXB8	463 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	DNAJC10	Q8IXB1	793 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	NBPF3	Q9H094	633 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	OSBPL5	Q9H0X9	879 aa	Predicted RBP	27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475		A0A087WWV3	80 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	CCDC69	A6NI79	296 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	KIF28P	B7ZC32	967 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	CMA1	P23946	247 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	TRDN	Q13061	729 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	UBE3C	Q15386	1083 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	AXDND1	Q5T1B0	1012 aa	Predicted RBP	27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	TTLL11	Q8NHH1	800 aa		27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	ANGEL1	Q9UNK9	670 aa	Known RBP	27.18	■■□□□ 1.94
GSDMD-208	ENST00000528475	STARD3NL	O95772	234 aa		27.17	■■□□□ 1.94
GSDMD-208	ENST00000528475	SKIL	P12757	684 aa		27.17	■■□□□ 1.94
GSDMD-208	ENST00000528475	HSP90AB3P	Q58FF7	597 aa		27.17	■■□□□ 1.94
GSDMD-208	ENST00000528475	LDHAL6A	Q6ZMR3	332 aa		27.17	■■□□□ 1.94
GSDMD-208	ENST00000528475	VGLL2	Q8N8G2	317 aa		27.17	■■□□□ 1.94
GSDMD-208	ENST00000528475	ARID5B	Q14865	1188 aa		27.17	■■□□□ 1.94
GSDMD-208	ENST00000528475	CDKL5	O76039	1030 aa		27.16	■■□□□ 1.94
GSDMD-208	ENST00000528475	ITGA6	P23229	1130 aa		27.16	■■□□□ 1.94
GSDMD-208	ENST00000528475	NLRP12	P59046	1061 aa		27.16	■■□□□ 1.94
GSDMD-208	ENST00000528475	ZRSR1	Q15695	479 aa	Known RBP	27.16	■■□□□ 1.94
GSDMD-208	ENST00000528475	NYAP1	Q6ZVC0	841 aa		27.16	■■□□□ 1.94
GSDMD-208	ENST00000528475	NLRP10	Q86W26	655 aa		27.16	■■□□□ 1.94
GSDMD-208	ENST00000528475	TIGD1	Q96MW7	591 aa		27.16	■■□□□ 1.94
GSDMD-208	ENST00000528475	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.16	■■□□□ 1.94
GSDMD-208	ENST00000528475	ANKRD18B	A2A2Z9	1011 aa		27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	SH2B2	O14492	632 aa	Predicted RBP	27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	ZNF202	O95125	648 aa		27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	SLC3A2	P08195	630 aa	Known RBP	27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	SLC39A14	Q15043	492 aa		27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	CEP135	Q66GS9	1140 aa		27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	ERCC4	Q92889	916 aa	Predicted RBP	27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	ANKRD36C	Q5JPF3	1778 aa		27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	CTSW	P56202	376 aa		27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	DPCR1	Q3MIW9	517 aa		27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	PPP4R3B	Q5MIZ7	849 aa		27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	NBPF11	Q86T75	865 aa		27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	CCDC112	Q8NEF3	446 aa		27.15	■■□□□ 1.94
GSDMD-208	ENST00000528475	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	27.14	■■□□□ 1.94
GSDMD-208	ENST00000528475	NCBP1	Q09161	790 aa	Known RBP	27.14	■■□□□ 1.94
GSDMD-208	ENST00000528475	DHX8	Q14562	1220 aa	Known RBP	27.14	■■□□□ 1.94
GSDMD-208	ENST00000528475	SLC9C2	Q5TAH2	1124 aa		27.14	■■□□□ 1.94
GSDMD-208	ENST00000528475	GREM2	Q9H772	168 aa		27.14	■■□□□ 1.94
GSDMD-208	ENST00000528475	MYH3	P11055	1940 aa		27.14	■■□□□ 1.93
GSDMD-208	ENST00000528475	FILIP1	Q7Z7B0	1213 aa		27.13	■■□□□ 1.93
GSDMD-208	ENST00000528475	TBC1D10C	Q8IV04	446 aa		27.13	■■□□□ 1.93
GSDMD-208	ENST00000528475	TMEM87B	Q96K49	555 aa		27.13	■■□□□ 1.93
GSDMD-208	ENST00000528475	ASAP1	Q9ULH1	1129 aa		27.13	■■□□□ 1.93
GSDMD-208	ENST00000528475	PPP6R2	O75170	966 aa		27.13	■■□□□ 1.93
GSDMD-208	ENST00000528475	ARID4A	P29374	1257 aa	Predicted RBP	27.13	■■□□□ 1.93
GSDMD-208	ENST00000528475	CYB5R4	Q7L1T6	521 aa		27.13	■■□□□ 1.93
GSDMD-208	ENST00000528475	PIGB	Q92521	554 aa		27.13	■■□□□ 1.93
GSDMD-208	ENST00000528475	ARID3A	Q99856	593 aa		27.13	■■□□□ 1.93
GSDMD-208	ENST00000528475	GJB4	Q9NTQ9	266 aa		27.13	■■□□□ 1.93
GSDMD-208	ENST00000528475	PFKFB1	P16118	471 aa		27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	METAP2	P50579	478 aa	Known RBP eCLIP	27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	RAB11FIP4	Q86YS3	637 aa		27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	ALG1	Q9BT22	464 aa		27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	PIH1D3	Q9NQM4	214 aa	Known RBP	27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	CNNM1	Q9NRU3	951 aa		27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	LRP6	O75581	1613 aa		27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	FAM237A	A0A1B0GTK4	181 aa		27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	TPM4	P67936	248 aa		27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	ALX1	Q15699	326 aa		27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	CPLX2	Q6PUV4	134 aa	Known RBP	27.12	■■□□□ 1.93
GSDMD-208	ENST00000528475	PDE8B	O95263	885 aa		27.11	■■□□□ 1.93
GSDMD-208	ENST00000528475	UQCRFS1P1	P0C7P4	283 aa		27.11	■■□□□ 1.93
GSDMD-208	ENST00000528475	PTPN14	Q15678	1187 aa		27.11	■■□□□ 1.93
GSDMD-208	ENST00000528475	HLF	Q16534	295 aa		27.11	■■□□□ 1.93
GSDMD-208	ENST00000528475	SYNE4	Q8N205	404 aa		27.11	■■□□□ 1.93
GSDMD-208	ENST00000528475	STRN4	Q9NRL3	753 aa		27.11	■■□□□ 1.93
GSDMD-208	ENST00000528475	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	LRP5	O75197	1615 aa		27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	USP27X	A6NNY8	438 aa		27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	EVA1C	P58658	441 aa		27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	APOA5	Q6Q788	366 aa		27.1	■■□□□ 1.93

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms