RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 AIDAQ96BJ3 306 aa9.15□□□□□ -0.95
SOX6-211ENST00000528429 GPR101Q96P66 508 aaPredicted RBP9.15□□□□□ -0.95
SOX6-211ENST00000528429 NEK1Q96PY6 1258 aa9.15□□□□□ -0.95
SOX6-211ENST00000528429 RAI14Q9P0K7 980 aa9.15□□□□□ -0.95
SOX6-211ENST00000528429 ZNF804BA4D1E1 1349 aa9.15□□□□□ -0.95
SOX6-211ENST00000528429 TNRC6CQ9HCJ0 1690 aaKnown RBP9.14□□□□□ -0.95
SOX6-211ENST00000528429 UBE3CQ15386 1083 aa9.14□□□□□ -0.95
SOX6-211ENST00000528429 TXNRD3Q86VQ6 643 aa9.14□□□□□ -0.95
SOX6-211ENST00000528429 MIGA1Q8NAN2 632 aa9.14□□□□□ -0.95
SOX6-211ENST00000528429 TNPO1Q92973 898 aaKnown RBP9.14□□□□□ -0.95
SOX6-211ENST00000528429 LRRC2Q9BYS8 371 aa9.14□□□□□ -0.95
SOX6-211ENST00000528429 NSFL1CQ9UNZ2 370 aaKnown RBP9.14□□□□□ -0.95
SOX6-211ENST00000528429 RPAP1Q9BWH6 1393 aaPredicted RBP9.14□□□□□ -0.95
SOX6-211ENST00000528429 LARGE1O95461 756 aa9.14□□□□□ -0.95
SOX6-211ENST00000528429 FGAP02671 866 aa9.14□□□□□ -0.95
SOX6-211ENST00000528429 RPS6KB1P23443 525 aa9.14□□□□□ -0.95
SOX6-211ENST00000528429 HIBADHP31937 336 aaKnown RBP9.14□□□□□ -0.95
SOX6-211ENST00000528429 FAM43AQ8N2R8 423 aa9.14□□□□□ -0.95
SOX6-211ENST00000528429 MTMR7Q9Y216 660 aa9.14□□□□□ -0.95
SOX6-211ENST00000528429 AKAP11Q9UKA4 1901 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 FOXP2O15409 715 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 MBD4O95243 580 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 STOX1Q6ZVD7 989 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 CCDC83Q8IWF9 413 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 RBM17Q96I25 401 aaKnown RBP9.13□□□□□ -0.95
SOX6-211ENST00000528429 ARMT1Q9H993 441 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 SH3BP1Q9Y3L3 701 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 PNPLA7Q6ZV29 1317 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 MAFGO15525 162 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 RAD21O60216 631 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 CYP7A1P22680 504 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 STK3Q13188 491 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 CUL4AQ13619 759 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 RAB3GAP1Q15042 981 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 IMMTQ16891 758 aaKnown RBP9.13□□□□□ -0.95
SOX6-211ENST00000528429 CRY2Q49AN0 593 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 NECAB1Q8N987 351 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 FLAD1Q8NFF5 587 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 CTNNA3Q9UI47 895 aa9.13□□□□□ -0.95
SOX6-211ENST00000528429 TCRBV5S4A2TA0A5A2 114 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 UFL1O94874 794 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 TSGA10IPQ3SY00 556 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 CHST3Q7LGC8 479 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 DENND2AQ9ULE3 1009 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 TPCN1Q9ULQ1 816 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 PARP3Q9Y6F1 533 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 E7EWF7 191 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 SF3B2Q13435 895 aaKnown RBP9.12□□□□□ -0.95
SOX6-211ENST00000528429 ME3Q16798 604 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 FBXO33Q7Z6M2 555 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 DEFB132Q7Z7B7 95 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 ZHX1Q9UKY1 873 aaPredicted RBP9.12□□□□□ -0.95
SOX6-211ENST00000528429 XDHP47989 1333 aa9.12□□□□□ -0.95
SOX6-211ENST00000528429 COL1A1P02452 1464 aaPredicted RBP9.11□□□□□ -0.95
SOX6-211ENST00000528429 ZNF213O14771 459 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 MCM4P33991 863 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 NUCB2P80303 420 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 GPSM2P81274 684 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 Q6ZUG5 572 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 PIAS4Q8N2W9 510 aaPredicted RBP9.11□□□□□ -0.95
SOX6-211ENST00000528429 TMTC2Q8N394 836 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 INTS4Q96HW7 963 aaKnown RBP9.11□□□□□ -0.95
SOX6-211ENST00000528429 PRKAB2O43741 272 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 TOB2Q14106 344 aaPredicted RBP9.11□□□□□ -0.95
SOX6-211ENST00000528429 ANKRD1Q15327 319 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 LCORLQ8N3X6 602 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 BRF1Q92994 677 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 SGSM3Q96HU1 749 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 GBP4Q96PP9 640 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 STRBPQ96SI9 672 aaKnown RBP9.11□□□□□ -0.95
SOX6-211ENST00000528429 STK32BQ9NY57 414 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 SMC3Q9UQE7 1217 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 ARAP2Q8WZ64 1704 aa9.11□□□□□ -0.95
SOX6-211ENST00000528429 C6orf229H3BNL8 230 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 PRDX5P30044 214 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 SLC15A2Q16348 729 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 FOXD4L6Q3SYB3 417 aaPredicted RBP9.1□□□□□ -0.95
SOX6-211ENST00000528429 NAA16Q6N069 864 aaPredicted RBP9.1□□□□□ -0.95
SOX6-211ENST00000528429 FOXD4L3Q6VB84 417 aaPredicted RBP9.1□□□□□ -0.95
SOX6-211ENST00000528429 RALYLQ86SE5 291 aaKnown RBP9.1□□□□□ -0.95
SOX6-211ENST00000528429 ADGRA1Q86SQ6 560 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 STK11IPQ8N1F8 1099 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 ZSCAN31Q96LW9 406 aaPredicted RBP9.1□□□□□ -0.95
SOX6-211ENST00000528429 CAMKK2Q96RR4 588 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 BRIP1Q9BX63 1249 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 NAPBQ9H115 298 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 SH2B1Q9NRF2 756 aaPredicted RBP9.1□□□□□ -0.95
SOX6-211ENST00000528429 GGA1Q9UJY5 639 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 LEMD3Q9Y2U8 911 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 CASZ1Q86V15 1759 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 MYO5AQ9Y4I1 1855 aaKnown RBP9.1□□□□□ -0.95
SOX6-211ENST00000528429 BBOX1O75936 387 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 TDO2P48775 406 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 OLFM4Q6UX06 510 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 DHX32Q7L7V1 743 aaKnown RBP9.1□□□□□ -0.95
SOX6-211ENST00000528429 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.1□□□□□ -0.95
SOX6-211ENST00000528429 SLC4A4Q9Y6R1 1079 aa9.1□□□□□ -0.95
SOX6-211ENST00000528429 PPEF1O14829 653 aaPredicted RBP9.09□□□□□ -0.95
SOX6-211ENST00000528429 ZNF804AQ7Z570 1209 aa9.09□□□□□ -0.95
SOX6-211ENST00000528429 MAGEB6P1A0A0J9YX57 407 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms