RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 DTX1Q86Y01 620 aa5.57□□□□□ -1.52
CSDE1-208ENST00000524652 GIMAP7Q8NHV1 300 aa5.57□□□□□ -1.52
CSDE1-208ENST00000524652 KRTAP9-2Q9BYQ4 174 aa5.57□□□□□ -1.52
CSDE1-208ENST00000524652 ZFYVE1Q9HBF4 777 aa5.57□□□□□ -1.52
CSDE1-208ENST00000524652 CPNE3O75131 537 aaKnown RBP5.56□□□□□ -1.52
CSDE1-208ENST00000524652 ITPKAP23677 461 aa5.56□□□□□ -1.52
CSDE1-208ENST00000524652 MCTP1Q6DN14 999 aa5.56□□□□□ -1.52
CSDE1-208ENST00000524652 C2CD4AQ8NCU7 369 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-208ENST00000524652 MFSD14AQ96MC6 490 aa5.56□□□□□ -1.52
CSDE1-208ENST00000524652 YIPF2Q9BWQ6 316 aa5.56□□□□□ -1.52
CSDE1-208ENST00000524652 FAM95CA0A1B0GW59 222 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-208ENST00000524652 WDR64B1ANS9 1081 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 B3GALT4O96024 378 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 IGHA2P01877 340 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 RXRBP28702 533 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 GP2P55259 537 aaKnown RBP5.55□□□□□ -1.52
CSDE1-208ENST00000524652 PTPN12Q05209 780 aaKnown RBP5.55□□□□□ -1.52
CSDE1-208ENST00000524652 SOX4Q06945 474 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-208ENST00000524652 ORC1Q13415 861 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 ZNF423Q2M1K9 1284 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 USPL1Q5W0Q7 1092 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 DDX54Q8TDD1 881 aaKnown RBP5.55□□□□□ -1.52
CSDE1-208ENST00000524652 EZH1Q92800 747 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-208ENST00000524652 DNAJC25Q9H1X3 360 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 ZNF576Q9H609 170 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 NPHS2Q9NP85 383 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 PIM2Q9P1W9 311 aa5.55□□□□□ -1.52
CSDE1-208ENST00000524652 COL17A1Q9UMD9 1497 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-208ENST00000524652 ADH5P11766 374 aa5.54□□□□□ -1.52
CSDE1-208ENST00000524652 DRD2P14416 443 aa5.54□□□□□ -1.52
CSDE1-208ENST00000524652 MAOBP27338 520 aa5.54□□□□□ -1.52
CSDE1-208ENST00000524652 USP11P51784 963 aa5.54□□□□□ -1.52
CSDE1-208ENST00000524652 POU4F3Q15319 338 aa5.54□□□□□ -1.52
CSDE1-208ENST00000524652 SPRED3Q2MJR0 410 aa5.54□□□□□ -1.52
CSDE1-208ENST00000524652 PRPF40BQ6NWY9 871 aaKnown RBP5.54□□□□□ -1.52
CSDE1-208ENST00000524652 PAOXQ6QHF9 649 aa5.54□□□□□ -1.52
CSDE1-208ENST00000524652 RETREG2Q8NC44 543 aa5.54□□□□□ -1.52
CSDE1-208ENST00000524652 ALKBH8Q96BT7 664 aaKnown RBP5.54□□□□□ -1.52
CSDE1-208ENST00000524652 DMRTB1Q96MA1 342 aa5.54□□□□□ -1.52
CSDE1-208ENST00000524652 METTL22Q9BUU2 404 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-208ENST00000524652 EHD4Q9H223 541 aa5.54□□□□□ -1.52
CSDE1-208ENST00000524652 GPR182O15218 404 aa5.53□□□□□ -1.52
CSDE1-208ENST00000524652 IRAK1P51617 712 aa5.53□□□□□ -1.52
CSDE1-208ENST00000524652 CDPF1Q6NVV7 123 aa5.53□□□□□ -1.52
CSDE1-208ENST00000524652 CCER1Q8TC90 406 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-208ENST00000524652 FBLIM1Q8WUP2 373 aa5.53□□□□□ -1.52
CSDE1-208ENST00000524652 CORO1BQ9BR76 489 aa5.53□□□□□ -1.52
CSDE1-208ENST00000524652 TRIM56Q9BRZ2 755 aaKnown RBP5.53□□□□□ -1.52
CSDE1-208ENST00000524652 ABCB6Q9NP58 842 aa5.53□□□□□ -1.52
CSDE1-208ENST00000524652 ATG3Q9NT62 314 aa5.53□□□□□ -1.52
CSDE1-208ENST00000524652 OAS3Q9Y6K5 1087 aaKnown RBP5.53□□□□□ -1.52
CSDE1-208ENST00000524652 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-208ENST00000524652 KRTAP9-6A0A140TA67 174 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 EIF1AYO14602 144 aaKnown RBP5.52□□□□□ -1.53
CSDE1-208ENST00000524652 WNT11O96014 354 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 F13BP05160 661 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 CTSBP07858 339 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 FOSL1P15407 271 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 AP3B2Q13367 1082 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 NFKBIBQ15653 356 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 RPS26P11Q5JNZ5 115 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-208ENST00000524652 CCDC74AQ96AQ1 378 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 OSBPL1AQ9BXW6 950 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 RBCK1Q9BYM8 510 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 LEMD3Q9Y2U8 911 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 ACTL7BQ9Y614 415 aa5.52□□□□□ -1.53
CSDE1-208ENST00000524652 SHROOM4Q9ULL8 1493 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 SYNGAP1Q96PV0 1343 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 ADAMTS4O75173 837 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 MAP7Q14244 749 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 MSMPQ1L6U9 139 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 ZAR1Q86SH2 424 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 FBXL6Q8N531 539 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 TMC1Q8TDI8 760 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 TBC1D32Q96NH3 1257 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 ARID3AQ99856 593 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 GSX1Q9H4S2 264 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-208ENST00000524652 PRKAG2Q9UGJ0 569 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 TRAK1Q9UPV9 953 aa5.51□□□□□ -1.53
CSDE1-208ENST00000524652 HOXA10P31260 410 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-208ENST00000524652 CSRNP1Q96S65 589 aa5.5□□□□□ -1.53
CSDE1-208ENST00000524652 KRTAP4-12Q9BQ66 201 aa5.5□□□□□ -1.53
CSDE1-208ENST00000524652 NIF3L1Q9GZT8 377 aa5.5□□□□□ -1.53
CSDE1-208ENST00000524652 SEMA6CQ9H3T2 930 aa5.5□□□□□ -1.53
CSDE1-208ENST00000524652 RAD18Q9NS91 495 aa5.5□□□□□ -1.53
CSDE1-208ENST00000524652 TMEM238LA0A1B0GVL6 79 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 SOWAHDA6NJG2 315 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 PAX4O43316 350 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 GADD45BO75293 160 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-208ENST00000524652 ECEL1O95672 775 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 PRNPP04156 253 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 HNRNPUQ00839 825 aaKnown RBP eCLIP5.49□□□□□ -1.53
CSDE1-208ENST00000524652 AKAP4Q5JQC9 854 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 GLIS3Q8NEA6 775 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 GATA6Q92908 595 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 WDR18Q9BV38 432 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 ACSS3Q9H6R3 686 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 FAM105AQ9NUU6 356 aa5.49□□□□□ -1.53
CSDE1-208ENST00000524652 AP4E1Q9UPM8 1137 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms