RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 EPHX3Q9H6B9 360 aa10.7□□□□□ -0.7
PUM1-213ENST00000524516 PRKAG2Q9UGJ0 569 aa10.7□□□□□ -0.7
PUM1-213ENST00000524516 TNPO2O14787 897 aaKnown RBP10.69□□□□□ -0.7
PUM1-213ENST00000524516 IRF6O14896 467 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 PRKAR2BP31323 418 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 IRF5Q13568 498 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 SHHQ15465 462 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 LRRC26Q2I0M4 334 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 ANKRD23Q86SG2 305 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.69□□□□□ -0.7
PUM1-213ENST00000524516 PHACTR3Q96KR7 559 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 PARK7Q99497 189 aaKnown RBP10.69□□□□□ -0.7
PUM1-213ENST00000524516 GAS2L1Q99501 681 aaPredicted RBP10.69□□□□□ -0.7
PUM1-213ENST00000524516 COA1Q9GZY4 146 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 HMX1Q9NP08 348 aaPredicted RBP10.69□□□□□ -0.7
PUM1-213ENST00000524516 SEC31BQ9NQW1 1179 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 PCDHAC2Q9Y5I4 1007 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 PIEZO1Q92508 2521 aa10.69□□□□□ -0.7
PUM1-213ENST00000524516 RBM5P52756 815 aaKnown RBP eCLIP10.68□□□□□ -0.7
PUM1-213ENST00000524516 GRIN2CQ14957 1233 aa10.68□□□□□ -0.7
PUM1-213ENST00000524516 CFAP100Q494V2 611 aa10.68□□□□□ -0.7
PUM1-213ENST00000524516 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.68□□□□□ -0.7
PUM1-213ENST00000524516 KNSTRNQ9Y448 316 aa10.68□□□□□ -0.7
PUM1-213ENST00000524516 FAM86C2PA6NEL3 165 aa10.67□□□□□ -0.7
PUM1-213ENST00000524516 SPDYE2BA6NHP3 402 aa10.67□□□□□ -0.7
PUM1-213ENST00000524516 F8W031 263 aaPredicted RBP10.67□□□□□ -0.7
PUM1-213ENST00000524516 HMGCRP04035 888 aa10.67□□□□□ -0.7
PUM1-213ENST00000524516 ANXA1P04083 346 aa10.67□□□□□ -0.7
PUM1-213ENST00000524516 SPDYE6P0CI01 402 aa10.67□□□□□ -0.7
PUM1-213ENST00000524516 GTF2IP78347 998 aa10.67□□□□□ -0.7
PUM1-213ENST00000524516 PPIL2Q13356 520 aa10.67□□□□□ -0.7
PUM1-213ENST00000524516 C9orf50Q5SZB4 431 aa10.67□□□□□ -0.7
PUM1-213ENST00000524516 IRS4O14654 1257 aaPredicted RBP10.66□□□□□ -0.7
PUM1-213ENST00000524516 BCRP11274 1271 aa10.66□□□□□ -0.7
PUM1-213ENST00000524516 EIF2S2P20042 333 aaKnown RBP10.66□□□□□ -0.7
PUM1-213ENST00000524516 EIF4A1P60842 406 aaKnown RBP10.66□□□□□ -0.7
PUM1-213ENST00000524516 PDE3AQ14432 1141 aa10.66□□□□□ -0.7
PUM1-213ENST00000524516 CCDC85BQ15834 202 aaPredicted RBP10.66□□□□□ -0.7
PUM1-213ENST00000524516 COPS6Q7L5N1 327 aa10.66□□□□□ -0.7
PUM1-213ENST00000524516 COA7Q96BR5 231 aa10.66□□□□□ -0.7
PUM1-213ENST00000524516 WRNIP1Q96S55 665 aa10.66□□□□□ -0.7
PUM1-213ENST00000524516 OGDHLQ9ULD0 1010 aa10.66□□□□□ -0.7
PUM1-213ENST00000524516 SNCAIPQ9Y6H5 919 aa10.66□□□□□ -0.7
PUM1-213ENST00000524516 PROSER3Q2NL68 480 aa10.65□□□□□ -0.7
PUM1-213ENST00000524516 POTEEQ6S8J3 1075 aa10.65□□□□□ -0.7
PUM1-213ENST00000524516 ANKRD18AQ8IVF6 992 aa10.65□□□□□ -0.7
PUM1-213ENST00000524516 CDAN1Q8IWY9 1227 aa10.65□□□□□ -0.7
PUM1-213ENST00000524516 PNISRQ8TF01 805 aaKnown RBP10.65□□□□□ -0.7
PUM1-213ENST00000524516 PRMT6Q96LA8 375 aaPredicted RBP10.65□□□□□ -0.7
PUM1-213ENST00000524516 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.7
PUM1-213ENST00000524516 MAST2Q6P0Q8 1798 aa10.65□□□□□ -0.71
PUM1-213ENST00000524516 AOX1Q06278 1338 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 MUC6Q6W4X9 2439 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 LTBP2Q14767 1821 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 GPR37L1O60883 481 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 U2AF1L5P0DN76 240 aaPredicted RBP10.64□□□□□ -0.71
PUM1-213ENST00000524516 CYP2C8P10632 490 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 U2AF1Q01081 240 aaKnown RBP eCLIP10.64□□□□□ -0.71
PUM1-213ENST00000524516 FOXK2Q01167 660 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 CCDC152Q4G0S7 254 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 LRP10Q7Z4F1 713 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 XAGE3Q8WTP9 111 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 ZKSCAN4Q969J2 545 aaPredicted RBP10.64□□□□□ -0.71
PUM1-213ENST00000524516 CCDC85AQ96PX6 553 aaPredicted RBP10.64□□□□□ -0.71
PUM1-213ENST00000524516 KCNH4Q9UQ05 1017 aa10.64□□□□□ -0.71
PUM1-213ENST00000524516 TCF20Q9UGU0 1960 aaKnown RBP10.63□□□□□ -0.71
PUM1-213ENST00000524516 COL3A1P02461 1466 aaPredicted RBP10.63□□□□□ -0.71
PUM1-213ENST00000524516 TCP10L2B9ZVM9 353 aa10.63□□□□□ -0.71
PUM1-213ENST00000524516 SMIM22K7EJ46 135 aa10.63□□□□□ -0.71
PUM1-213ENST00000524516 COL6A1P12109 1028 aa10.63□□□□□ -0.71
PUM1-213ENST00000524516 TNNI2P48788 182 aa10.63□□□□□ -0.71
PUM1-213ENST00000524516 EIF4G2P78344 907 aaKnown RBP eCLIP10.63□□□□□ -0.71
PUM1-213ENST00000524516 NHLH1Q02575 133 aa10.63□□□□□ -0.71
PUM1-213ENST00000524516 AKNAD1Q5T1N1 836 aa10.63□□□□□ -0.71
PUM1-213ENST00000524516 TMEM39BQ9GZU3 492 aa10.63□□□□□ -0.71
PUM1-213ENST00000524516 ZNF576Q9H609 170 aa10.63□□□□□ -0.71
PUM1-213ENST00000524516 ARAP2Q8WZ64 1704 aa10.63□□□□□ -0.71
PUM1-213ENST00000524516 ATP5J2-PTCD1G3V325 749 aa10.62□□□□□ -0.71
PUM1-213ENST00000524516 HTATSF1O43719 755 aaKnown RBP10.62□□□□□ -0.71
PUM1-213ENST00000524516 HSP90B1P14625 803 aaKnown RBP10.62□□□□□ -0.71
PUM1-213ENST00000524516 DNAJB2P25686 324 aa10.62□□□□□ -0.71
PUM1-213ENST00000524516 CCT4P50991 539 aaKnown RBP10.62□□□□□ -0.71
PUM1-213ENST00000524516 PPATQ06203 517 aa10.62□□□□□ -0.71
PUM1-213ENST00000524516 PDIA6Q15084 440 aa10.62□□□□□ -0.71
PUM1-213ENST00000524516 TXNRD3Q86VQ6 643 aa10.62□□□□□ -0.71
PUM1-213ENST00000524516 RNPC3Q96LT9 517 aaKnown RBP10.62□□□□□ -0.71
PUM1-213ENST00000524516 TEPSINQ96N21 525 aa10.62□□□□□ -0.71
PUM1-213ENST00000524516 RSPH6AQ9H0K4 717 aa10.62□□□□□ -0.71
PUM1-213ENST00000524516 ZNF70Q9UC06 446 aaPredicted RBP10.62□□□□□ -0.71
PUM1-213ENST00000524516 IGFBP4P22692 258 aa10.61□□□□□ -0.71
PUM1-213ENST00000524516 TRIM32Q13049 653 aa10.61□□□□□ -0.71
PUM1-213ENST00000524516 AAK1Q2M2I8 961 aa10.61□□□□□ -0.71
PUM1-213ENST00000524516 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
PUM1-213ENST00000524516 CERS5Q8N5B7 392 aa10.61□□□□□ -0.71
PUM1-213ENST00000524516 SMCR8Q8TEV9 937 aaPredicted RBP10.61□□□□□ -0.71
PUM1-213ENST00000524516 UIMC1Q96RL1 719 aa10.61□□□□□ -0.71
PUM1-213ENST00000524516 C11orf16Q9NQ32 467 aa10.61□□□□□ -0.71
PUM1-213ENST00000524516 PRDM5Q9NQX1 630 aaPredicted RBP10.61□□□□□ -0.71
PUM1-213ENST00000524516 SPEF2Q9C093 1822 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms