RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ARAP2Q8WZ64 1704 aa14.54□□□□□ -0.08
PVT1-215ENST00000522963 ASTN2O75129 1339 aaPredicted RBP14.53□□□□□ -0.08
PVT1-215ENST00000522963 ERC2O15083 957 aa14.53□□□□□ -0.08
PVT1-215ENST00000522963 ZBTB22O15209 634 aa14.53□□□□□ -0.08
PVT1-215ENST00000522963 GLRX3O76003 335 aaKnown RBP14.53□□□□□ -0.08
PVT1-215ENST00000522963 APLP1P51693 650 aa14.53□□□□□ -0.08
PVT1-215ENST00000522963 ZNF280AP59817 542 aaPredicted RBP14.53□□□□□ -0.08
PVT1-215ENST00000522963 FMR1Q06787 632 aaKnown RBP eCLIP14.53□□□□□ -0.08
PVT1-215ENST00000522963 PI16Q6UXB8 463 aa14.53□□□□□ -0.08
PVT1-215ENST00000522963 GLIS2Q9BZE0 524 aaPredicted RBP14.53□□□□□ -0.08
PVT1-215ENST00000522963 SNRKQ9NRH2 765 aa14.53□□□□□ -0.08
PVT1-215ENST00000522963 HMG20BQ9P0W2 317 aa14.53□□□□□ -0.08
PVT1-215ENST00000522963 NDUFB9Q9Y6M9 179 aa14.53□□□□□ -0.08
PVT1-215ENST00000522963 COL1A1P02452 1464 aaPredicted RBP14.52□□□□□ -0.08
PVT1-215ENST00000522963 FAM205AQ6ZU69 1335 aa14.52□□□□□ -0.08
PVT1-215ENST00000522963 TRAF5O00463 557 aa14.52□□□□□ -0.09
PVT1-215ENST00000522963 ITGBL1O95965 494 aaPredicted RBP14.52□□□□□ -0.09
PVT1-215ENST00000522963 RBM5P52756 815 aaKnown RBP eCLIP14.52□□□□□ -0.09
PVT1-215ENST00000522963 TTC22Q5TAA0 569 aa14.52□□□□□ -0.09
PVT1-215ENST00000522963 USP48Q86UV5 1035 aa14.52□□□□□ -0.09
PVT1-215ENST00000522963 DCPSQ96C86 337 aaKnown RBP14.52□□□□□ -0.09
PVT1-215ENST00000522963 HAUS7Q99871 368 aa14.52□□□□□ -0.09
PVT1-215ENST00000522963 ZNF408Q9H9D4 720 aa14.52□□□□□ -0.09
PVT1-215ENST00000522963 GGA3Q9NZ52 723 aa14.52□□□□□ -0.09
PVT1-215ENST00000522963 DENND2AQ9ULE3 1009 aa14.52□□□□□ -0.09
PVT1-215ENST00000522963 SEMA3EO15041 775 aa14.51□□□□□ -0.09
PVT1-215ENST00000522963 MAP4K4O95819 1239 aaPredicted RBP14.51□□□□□ -0.09
PVT1-215ENST00000522963 GSPT1P15170 499 aaKnown RBP14.51□□□□□ -0.09
PVT1-215ENST00000522963 ZAP70P43403 619 aa14.51□□□□□ -0.09
PVT1-215ENST00000522963 ANGEL2Q5VTE6 544 aaKnown RBP14.51□□□□□ -0.09
PVT1-215ENST00000522963 SPATA5Q8NB90 893 aa14.51□□□□□ -0.09
PVT1-215ENST00000522963 ZC3H15Q8WU90 426 aaKnown RBP14.51□□□□□ -0.09
PVT1-215ENST00000522963 DNAJC2Q99543 621 aaKnown RBP14.51□□□□□ -0.09
PVT1-215ENST00000522963 TTF2Q9UNY4 1162 aaKnown RBP14.51□□□□□ -0.09
PVT1-215ENST00000522963 SCAF8Q9UPN6 1271 aaKnown RBP14.51□□□□□ -0.09
PVT1-215ENST00000522963 FKBP1AP62942 108 aaKnown RBP14.5□□□□□ -0.09
PVT1-215ENST00000522963 DLGAP5Q15398 846 aa14.5□□□□□ -0.09
PVT1-215ENST00000522963 NBPF9Q3BBW0 867 aa14.5□□□□□ -0.09
PVT1-215ENST00000522963 DLK2Q6UY11 383 aa14.5□□□□□ -0.09
PVT1-215ENST00000522963 CDC37L1Q7L3B6 337 aa14.5□□□□□ -0.09
PVT1-215ENST00000522963 KRT26Q7Z3Y9 468 aa14.5□□□□□ -0.09
PVT1-215ENST00000522963 EDC3Q96F86 508 aaKnown RBP14.5□□□□□ -0.09
PVT1-215ENST00000522963 PDS5AQ29RF7 1337 aaKnown RBP14.49□□□□□ -0.09
PVT1-215ENST00000522963 PASKQ96RG2 1323 aa14.49□□□□□ -0.09
PVT1-215ENST00000522963 ADM5C9JUS6 153 aa14.49□□□□□ -0.09
PVT1-215ENST00000522963 CYP2E1P05181 493 aaPredicted RBP14.49□□□□□ -0.09
PVT1-215ENST00000522963 GRIK5Q16478 980 aa14.49□□□□□ -0.09
PVT1-215ENST00000522963 CFAP100Q494V2 611 aa14.49□□□□□ -0.09
PVT1-215ENST00000522963 SULF1Q8IWU6 871 aa14.49□□□□□ -0.09
PVT1-215ENST00000522963 TBC1D22AQ8WUA7 517 aa14.49□□□□□ -0.09
PVT1-215ENST00000522963 ANTXR1Q9H6X2 564 aa14.49□□□□□ -0.09
PVT1-215ENST00000522963 PGAP2Q9UHJ9 254 aa14.49□□□□□ -0.09
PVT1-215ENST00000522963 PCDHAC2Q9Y5I4 1007 aa14.49□□□□□ -0.09
PVT1-215ENST00000522963 TRPM7Q96QT4 1865 aa14.48□□□□□ -0.09
PVT1-215ENST00000522963 GOLIM4O00461 696 aa14.48□□□□□ -0.09
PVT1-215ENST00000522963 WNT10BO00744 389 aa14.48□□□□□ -0.09
PVT1-215ENST00000522963 TBC1D9Q6ZT07 1266 aa14.48□□□□□ -0.09
PVT1-215ENST00000522963 WDR66Q8TBY9 1149 aa14.48□□□□□ -0.09
PVT1-215ENST00000522963 PIH1D3Q9NQM4 214 aaKnown RBP14.48□□□□□ -0.09
PVT1-215ENST00000522963 PAG1Q9NWQ8 432 aa14.48□□□□□ -0.09
PVT1-215ENST00000522963 TMEM88BA6NKF7 163 aa14.47□□□□□ -0.09
PVT1-215ENST00000522963 TRIM6-TRIM34B2RNG4 842 aa14.47□□□□□ -0.09
PVT1-215ENST00000522963 CELF2O95319 508 aaKnown RBP14.47□□□□□ -0.09
PVT1-215ENST00000522963 SDSP20132 328 aa14.47□□□□□ -0.09
PVT1-215ENST00000522963 ABT1Q9ULW3 272 aaKnown RBP14.47□□□□□ -0.09
PVT1-215ENST00000522963 CLRN2A0PK11 232 aa14.46□□□□□ -0.09
PVT1-215ENST00000522963 CRKP46108 304 aa14.46□□□□□ -0.09
PVT1-215ENST00000522963 MMP14P50281 582 aa14.46□□□□□ -0.09
PVT1-215ENST00000522963 BMP2KLQ5H9B9 411 aa14.46□□□□□ -0.09
PVT1-215ENST00000522963 RILPL2Q969X0 211 aa14.46□□□□□ -0.09
PVT1-215ENST00000522963 VEZTQ9HBM0 779 aa14.46□□□□□ -0.09
PVT1-215ENST00000522963 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
PVT1-215ENST00000522963 ABCF2Q9UG63 623 aa14.46□□□□□ -0.09
PVT1-215ENST00000522963 MKRN1Q9UHC7 482 aaKnown RBP14.46□□□□□ -0.09
PVT1-215ENST00000522963 SALL1Q9NSC2 1324 aa14.45□□□□□ -0.1
PVT1-215ENST00000522963 MYO1BO43795 1136 aa14.45□□□□□ -0.1
PVT1-215ENST00000522963 TTF1Q15361 905 aaPredicted RBP14.45□□□□□ -0.1
PVT1-215ENST00000522963 PRAMEF18Q5VWM3 479 aa14.45□□□□□ -0.1
PVT1-215ENST00000522963 PAXIP1Q6ZW49 1069 aaPredicted RBP14.45□□□□□ -0.1
PVT1-215ENST00000522963 KBTBD3Q8NAB2 608 aa14.45□□□□□ -0.1
PVT1-215ENST00000522963 EVI5LQ96CN4 794 aa14.45□□□□□ -0.1
PVT1-215ENST00000522963 PRMT6Q96LA8 375 aaPredicted RBP14.45□□□□□ -0.1
PVT1-215ENST00000522963 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
PVT1-215ENST00000522963 LDHBP07195 334 aaKnown RBP14.44□□□□□ -0.1
PVT1-215ENST00000522963 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
PVT1-215ENST00000522963 PRDX5P30044 214 aa14.44□□□□□ -0.1
PVT1-215ENST00000522963 GRM1Q13255 1194 aa14.44□□□□□ -0.1
PVT1-215ENST00000522963 CST9Q5W186 159 aa14.44□□□□□ -0.1
PVT1-215ENST00000522963 TEKT1Q969V4 418 aa14.44□□□□□ -0.1
PVT1-215ENST00000522963 TDRD3Q9H7E2 651 aaKnown RBP14.44□□□□□ -0.1
PVT1-215ENST00000522963 SERPINA10Q9UK55 444 aa14.44□□□□□ -0.1
PVT1-215ENST00000522963 MAST3O60307 1309 aa14.43□□□□□ -0.1
PVT1-215ENST00000522963 AKAP11Q9UKA4 1901 aa14.43□□□□□ -0.1
PVT1-215ENST00000522963 IDH1O75874 414 aaKnown RBP14.43□□□□□ -0.1
PVT1-215ENST00000522963 ERICH6Q7L0X2 663 aa14.43□□□□□ -0.1
PVT1-215ENST00000522963 ZGPATQ8N5A5 531 aaKnown RBP14.43□□□□□ -0.1
PVT1-215ENST00000522963 MTMR14Q8NCE2 650 aa14.43□□□□□ -0.1
PVT1-215ENST00000522963 CDCA5Q96FF9 252 aa14.43□□□□□ -0.1
PVT1-215ENST00000522963 ZBED3Q96IU2 234 aaPredicted RBP14.43□□□□□ -0.1
PVT1-215ENST00000522963 FSD1Q9BTV5 496 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms