RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 LARP6Q9BRS8 491 aaKnown RBP18.03■□□□□ 0.48
CSGALNACT1-211ENST00000522854 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
CSGALNACT1-211ENST00000522854 HAND2P61296 217 aa18.02■□□□□ 0.48
CSGALNACT1-211ENST00000522854 DYNLL1P63167 89 aaKnown RBP18.02■□□□□ 0.48
CSGALNACT1-211ENST00000522854 BECN1Q14457 450 aa18.02■□□□□ 0.48
CSGALNACT1-211ENST00000522854 TICAM2Q86XR7 235 aa18.02■□□□□ 0.48
CSGALNACT1-211ENST00000522854 JAKMIP1Q96N16 626 aaKnown RBP18.02■□□□□ 0.48
CSGALNACT1-211ENST00000522854 STRBPQ96SI9 672 aaKnown RBP18.02■□□□□ 0.48
CSGALNACT1-211ENST00000522854 DSCC1Q9BVC3 393 aa18.02■□□□□ 0.48
CSGALNACT1-211ENST00000522854 SNED1Q8TER0 1413 aa18.02■□□□□ 0.48
CSGALNACT1-211ENST00000522854 CCDC88AQ3V6T2 1871 aa18.02■□□□□ 0.48
CSGALNACT1-211ENST00000522854 CASTP20810 708 aaKnown RBP18.02■□□□□ 0.47
CSGALNACT1-211ENST00000522854 GTF2IP78347 998 aa18.02■□□□□ 0.47
CSGALNACT1-211ENST00000522854 DIXDC1Q155Q3 683 aa18.02■□□□□ 0.47
CSGALNACT1-211ENST00000522854 NAA16Q6N069 864 aaPredicted RBP18.02■□□□□ 0.47
CSGALNACT1-211ENST00000522854 HSCBQ8IWL3 235 aa18.02■□□□□ 0.47
CSGALNACT1-211ENST00000522854 TCEANC2Q96MN5 208 aa18.02■□□□□ 0.47
CSGALNACT1-211ENST00000522854 FGAP02671 866 aa18.01■□□□□ 0.47
CSGALNACT1-211ENST00000522854 APPP05067 770 aa18.01■□□□□ 0.47
CSGALNACT1-211ENST00000522854 AOC3Q16853 763 aa18.01■□□□□ 0.47
CSGALNACT1-211ENST00000522854 KCNB2Q92953 911 aa18.01■□□□□ 0.47
CSGALNACT1-211ENST00000522854 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
CSGALNACT1-211ENST00000522854 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
CSGALNACT1-211ENST00000522854 PDS5AQ29RF7 1337 aaKnown RBP18.01■□□□□ 0.47
CSGALNACT1-211ENST00000522854 STOX1Q6ZVD7 989 aa18■□□□□ 0.47
CSGALNACT1-211ENST00000522854 SNX21Q969T3 373 aa18■□□□□ 0.47
CSGALNACT1-211ENST00000522854 SCN9AQ15858 1988 aa18■□□□□ 0.47
CSGALNACT1-211ENST00000522854 ZKSCAN1P17029 563 aaPredicted RBP18■□□□□ 0.47
CSGALNACT1-211ENST00000522854 MFSD14BQ5SR56 506 aa18■□□□□ 0.47
CSGALNACT1-211ENST00000522854 IL17RAQ96F46 866 aa18■□□□□ 0.47
CSGALNACT1-211ENST00000522854 EPB41L4AQ9HCS5 686 aaPredicted RBP18■□□□□ 0.47
CSGALNACT1-211ENST00000522854 DZIP1Q86YF9 867 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-211ENST00000522854 WDR66Q8TBY9 1149 aa17.99■□□□□ 0.47
CSGALNACT1-211ENST00000522854 SDR42E1Q8WUS8 393 aa17.99■□□□□ 0.47
CSGALNACT1-211ENST00000522854 SLKQ9H2G2 1235 aaPredicted RBP17.99■□□□□ 0.47
CSGALNACT1-211ENST00000522854 AATFQ9NY61 560 aaKnown RBP eCLIP17.99■□□□□ 0.47
CSGALNACT1-211ENST00000522854 LAMA4Q16363 1823 aa17.99■□□□□ 0.47
CSGALNACT1-211ENST00000522854 LDHBP07195 334 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-211ENST00000522854 RIOK1Q9BRS2 568 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-211ENST00000522854 COA1Q9GZY4 146 aa17.99■□□□□ 0.47
CSGALNACT1-211ENST00000522854 BRCA1P38398 1863 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-211ENST00000522854 MYH2Q9UKX2 1941 aa17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 MAGEB6P1A0A0J9YX57 407 aa17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 F8W031 263 aaPredicted RBP17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 G3V3G9 751 aa17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 SMIM22K7EJ46 135 aa17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 DCAF8Q5TAQ9 597 aa17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 RNF20Q5VTR2 975 aa17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 CERS5Q8N5B7 392 aa17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 NLGN2Q8NFZ4 835 aa17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 SLC4A4Q9Y6R1 1079 aa17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 MAST2Q6P0Q8 1798 aa17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 RPAP1Q9BWH6 1393 aaPredicted RBP17.98■□□□□ 0.47
CSGALNACT1-211ENST00000522854 GSG1L2A8MUP6 293 aa17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 K7ELQ4 463 aaPredicted RBP17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 ST18O60284 1047 aa17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 PIM2Q9P1W9 311 aa17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 SALL1Q9NSC2 1324 aa17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 BAZ2AQ9UIF9 1905 aaKnown RBP17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 TGFB2P61812 414 aa17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 NKX2-3Q8TAU0 364 aa17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 EYA3Q99504 573 aa17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 RTFDC1Q9BY42 306 aaPredicted RBP17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 NBPF3Q9H094 633 aa17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 ZNF277Q9NRM2 450 aaPredicted RBP17.97■□□□□ 0.47
CSGALNACT1-211ENST00000522854 ECE2O60344 883 aa17.96■□□□□ 0.47
CSGALNACT1-211ENST00000522854 IFNL3Q8IZI9 196 aa17.96■□□□□ 0.47
CSGALNACT1-211ENST00000522854 STK11IPQ8N1F8 1099 aa17.96■□□□□ 0.47
CSGALNACT1-211ENST00000522854 TTC14Q96N46 770 aa17.96■□□□□ 0.47
CSGALNACT1-211ENST00000522854 ZSWIM6Q9HCJ5 1215 aa17.96■□□□□ 0.47
CSGALNACT1-211ENST00000522854 INCENPQ9NQS7 918 aa17.96■□□□□ 0.47
CSGALNACT1-211ENST00000522854 COL4A5P29400 1685 aa17.96■□□□□ 0.46
CSGALNACT1-211ENST00000522854 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.46
CSGALNACT1-211ENST00000522854 AK2P54819 239 aa17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 EVX2Q03828 476 aa17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 CCDC93Q567U6 631 aa17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 LRRC2Q9BYS8 371 aa17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 PATL2C9JE40 543 aaKnown RBP17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 E7EWF7 191 aa17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 PPIP5K2O43314 1243 aa17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 DTNBO60941 627 aa17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 RUFY3Q7L099 469 aa17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 CHST3Q7LGC8 479 aa17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 ZGPATQ8N5A5 531 aaKnown RBP17.95■□□□□ 0.46
CSGALNACT1-211ENST00000522854 FAM205AQ6ZU69 1335 aa17.94■□□□□ 0.46
CSGALNACT1-211ENST00000522854 SLC4A8Q2Y0W8 1093 aa17.94■□□□□ 0.46
CSGALNACT1-211ENST00000522854 TSGA10IPQ3SY00 556 aa17.94■□□□□ 0.46
CSGALNACT1-211ENST00000522854 DALRD3Q5D0E6 543 aaKnown RBP17.94■□□□□ 0.46
CSGALNACT1-211ENST00000522854 SPTY2D1Q68D10 685 aaPredicted RBP17.94■□□□□ 0.46
CSGALNACT1-211ENST00000522854 CYP46A1Q9Y6A2 500 aa17.94■□□□□ 0.46
CSGALNACT1-211ENST00000522854 KIAA2012Q0VF49 1180 aa17.93■□□□□ 0.46
CSGALNACT1-211ENST00000522854 IMMTQ16891 758 aaKnown RBP17.93■□□□□ 0.46
CSGALNACT1-211ENST00000522854 TBC1D10CQ8IV04 446 aa17.93■□□□□ 0.46
CSGALNACT1-211ENST00000522854 NEK1Q96PY6 1258 aa17.93■□□□□ 0.46
CSGALNACT1-211ENST00000522854 PDRG1Q9NUG6 133 aa17.93■□□□□ 0.46
CSGALNACT1-211ENST00000522854 BCS1LQ9Y276 419 aa17.93■□□□□ 0.46
CSGALNACT1-211ENST00000522854 ZNF646O15015 1829 aaPredicted RBP17.93■□□□□ 0.46
CSGALNACT1-211ENST00000522854 CYP2D7A0A087X1C5 515 aa17.93■□□□□ 0.46
CSGALNACT1-211ENST00000522854 YDJCA8MPS7 323 aa17.93■□□□□ 0.46
CSGALNACT1-211ENST00000522854 ZNF213O14771 459 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms