RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 ZNF75DP51815 510 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 SMTNP53814 917 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 EVA1CP58658 441 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 PDE4BQ07343 736 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 DHX8Q14562 1220 aaKnown RBP9.41□□□□□ -0.9
HMGB4-204ENST00000522796 AFAP1Q8N556 730 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 CDC5LQ99459 802 aaKnown RBP9.41□□□□□ -0.9
HMGB4-204ENST00000522796 USP26Q9BXU7 913 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 PLEKHA4Q9H4M7 779 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 IFT122Q9HBG6 1241 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 PDE11AQ9HCR9 933 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 PAPOLBQ9NRJ5 636 aaKnown RBP9.41□□□□□ -0.9
HMGB4-204ENST00000522796 DMRT2Q9Y5R5 561 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 GAPVD1Q14C86 1478 aa9.41□□□□□ -0.9
HMGB4-204ENST00000522796 M0R2C6 588 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 LIN7AO14910 233 aaPredicted RBP9.4□□□□□ -0.9
HMGB4-204ENST00000522796 SMNDC1O75940 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
HMGB4-204ENST00000522796 EIF2B5Q13144 721 aaKnown RBP9.4□□□□□ -0.9
HMGB4-204ENST00000522796 BRD3Q15059 726 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 Q4G0T1 1027 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 AGAP9Q5VTM2 703 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 OLFML1Q6UWY5 402 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 BARGINQ6ZT62 677 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 ARHGEF25Q86VW2 580 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 PLPP6Q8IY26 295 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 SMYD1Q8NB12 490 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 HNRNPLLQ8WVV9 542 aaKnown RBP9.4□□□□□ -0.9
HMGB4-204ENST00000522796 CLIC6Q96NY7 704 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 RPAP3Q9H6T3 665 aaPredicted RBP9.4□□□□□ -0.9
HMGB4-204ENST00000522796 ZNF510Q9Y2H8 683 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 DENND4BO75064 1496 aaPredicted RBP9.4□□□□□ -0.9
HMGB4-204ENST00000522796 SAMD9Q5K651 1589 aa9.4□□□□□ -0.9
HMGB4-204ENST00000522796 TTC41PQ6P2S7 1318 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 TMEM110-MUSTN1A8MSY1 372 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 TSPY4P0CV99 314 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 TSPY10P0CW01 314 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 MYBPC3Q14896 1274 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 WDR43Q15061 677 aaKnown RBP eCLIP9.4□□□□□ -0.91
HMGB4-204ENST00000522796 SLC4A8Q2Y0W8 1093 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 HDXQ7Z353 690 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 TMC6Q7Z403 805 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 SPATS2Q86XZ4 545 aaKnown RBP9.4□□□□□ -0.91
HMGB4-204ENST00000522796 DZIP1Q86YF9 867 aaKnown RBP9.4□□□□□ -0.91
HMGB4-204ENST00000522796 RPAP2Q8IXW5 612 aaPredicted RBP9.4□□□□□ -0.91
HMGB4-204ENST00000522796 PEX5LQ8IYB4 626 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 CCDC150Q8NCX0 1101 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 CHAMP1Q96JM3 812 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 CAPS2Q9BXY5 557 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 TMCC3Q9ULS5 477 aa9.4□□□□□ -0.91
HMGB4-204ENST00000522796 RPRD2Q5VT52 1461 aaKnown RBP9.39□□□□□ -0.91
HMGB4-204ENST00000522796 PHLPP2Q6ZVD8 1323 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 SHOX2O60902 331 aaPredicted RBP9.39□□□□□ -0.91
HMGB4-204ENST00000522796 RASSF9O75901 435 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 MTA2O94776 668 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 VIL1P09327 827 aaKnown RBP9.39□□□□□ -0.91
HMGB4-204ENST00000522796 YY1P25490 414 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 CUL3Q13618 768 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 SNCBQ16143 134 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 BMP2KLQ5H9B9 411 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 DPY19L2Q6NUT2 758 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 KIRREL3Q8IZU9 778 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 GALNT15Q8N3T1 639 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 ZGPATQ8N5A5 531 aaKnown RBP9.39□□□□□ -0.91
HMGB4-204ENST00000522796 TRIM58Q8NG06 486 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 JAKMIP2Q96AA8 810 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 PRDM15P57071 1507 aaPredicted RBP9.39□□□□□ -0.91
HMGB4-204ENST00000522796 GADD45BO75293 160 aaPredicted RBP9.39□□□□□ -0.91
HMGB4-204ENST00000522796 CCDC192P0DO97 292 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 EVCP57679 992 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 WASHC5Q12768 1159 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 SLMAPQ14BN4 828 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 CCDC57Q2TAC2 916 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 LRRFIP1Q32MZ4 808 aaKnown RBP9.39□□□□□ -0.91
HMGB4-204ENST00000522796 PARP10Q53GL7 1025 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 COBLL1Q53SF7 1204 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 CEP57Q86XR8 500 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 ANKK1Q8NFD2 765 aa9.39□□□□□ -0.91
HMGB4-204ENST00000522796 ABCA10Q8WWZ4 1543 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 CAMSAP2Q08AD1 1489 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 CCDC159P0C7I6 412 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 SYT1P21579 422 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 ARHGAP25P42331 645 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 CCT5P48643 541 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 MCM2P49736 904 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 CLPPQ16740 277 aaPredicted RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 SEPT14Q6ZU15 432 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 RNF168Q8IYW5 571 aaPredicted RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 ERMNQ8TAM6 284 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 ZC3H15Q8WU90 426 aaKnown RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 RUFY1Q96T51 708 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 MAK16Q9BXY0 300 aaKnown RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 ZMAT5Q9UDW3 170 aaKnown RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 ZNF644Q9H582 1327 aaPredicted RBP9.38□□□□□ -0.91
HMGB4-204ENST00000522796 CFAP74Q9C0B2 1584 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 GOLGA6L9A6NEM1 432 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 TMEM221A6NGB7 291 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 KIF3BO15066 747 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 CYP27B1O15528 508 aa9.38□□□□□ -0.91
HMGB4-204ENST00000522796 TRIM21P19474 475 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms