RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 LRRC31Q6UY01 552 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 CEP57Q86XR8 500 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 CCDC125Q86Z20 511 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 TRMT2AQ8IZ69 625 aaKnown RBP5.89□□□□□ -1.47
NPM1-207ENST00000521260 AFAP1Q8N556 730 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 TEX9Q8N6V9 391 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 C3orf20Q8ND61 904 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 TRIM58Q8NG06 486 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 ATL2Q8NHH9 583 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 B4GALNT2Q8NHY0 566 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 WDR66Q8TBY9 1149 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 ANKRD24Q8TF21 1146 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 DYDC1Q8WWB3 177 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 RABGGTAQ92696 567 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 P3H4Q92791 437 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 KCNB2Q92953 911 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 ZKSCAN4Q969J2 545 aaPredicted RBP5.89□□□□□ -1.47
NPM1-207ENST00000521260 SPDL1Q96EA4 605 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 BHMT2Q9H2M3 363 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 KCNF1Q9H3M0 494 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 VIPAS39Q9H9C1 493 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 KIF9Q9HAQ2 790 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 VPS18Q9P253 973 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 CORO1CQ9ULV4 474 aaPredicted RBP5.89□□□□□ -1.47
NPM1-207ENST00000521260 DAAM1Q9Y4D1 1078 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 ZNF644Q9H582 1327 aaPredicted RBP5.89□□□□□ -1.47
NPM1-207ENST00000521260 NAIPQ13075 1403 aa5.89□□□□□ -1.47
NPM1-207ENST00000521260 E9PCH4 1651 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 GCC2Q8IWJ2 1684 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 ZSCAN12O43309 604 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 CBFA2T2O43439 604 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 SLC10A3P09131 477 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 VIL1P09327 827 aaKnown RBP5.88□□□□□ -1.47
NPM1-207ENST00000521260 FDX1P10109 184 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 TRIM21P19474 475 aaKnown RBP5.88□□□□□ -1.47
NPM1-207ENST00000521260 COPB2P35606 906 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 RANBP1P43487 201 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 PAPOLAP51003 745 aaKnown RBP5.88□□□□□ -1.47
NPM1-207ENST00000521260 IFT88Q13099 833 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 WASHC4Q2M389 1173 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 ERCC6LQ2NKX8 1250 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 CFAP70Q5T0N1 1121 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 SOGA3Q5TF21 947 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 CWF19L1Q69YN2 538 aaKnown RBP5.88□□□□□ -1.47
NPM1-207ENST00000521260 ISM2Q6H9L7 571 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 C16orf87Q6PH81 154 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 RPAP2Q8IXW5 612 aaPredicted RBP5.88□□□□□ -1.47
NPM1-207ENST00000521260 ANKRD13AQ8IZ07 590 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 OR8K1Q8NGG5 319 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 GAS2L2Q8NHY3 880 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 ERMNQ8TAM6 284 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 AFAP1L1Q8TED9 768 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 PBXIP1Q96AQ6 731 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 FAM81BQ96LP2 452 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 UIMC1Q96RL1 719 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 MPHOSPH8Q99549 860 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 TRIM5Q9C035 493 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 MMADHCQ9H3L0 296 aaPredicted RBP5.88□□□□□ -1.47
NPM1-207ENST00000521260 HMX1Q9NP08 348 aaPredicted RBP5.88□□□□□ -1.47
NPM1-207ENST00000521260 EXOC1Q9NV70 894 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 SPATA7Q9P0W8 599 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 CIDEBQ9UHD4 219 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 PAIP2BQ9ULR5 123 aaKnown RBP5.88□□□□□ -1.47
NPM1-207ENST00000521260 TPX2Q9ULW0 747 aaKnown RBP5.88□□□□□ -1.47
NPM1-207ENST00000521260 BARX2Q9UMQ3 279 aaPredicted RBP5.88□□□□□ -1.47
NPM1-207ENST00000521260 FAM169AQ9Y6X4 670 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 PPIP5K1Q6PFW1 1433 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 ATP10AO60312 1499 aa5.88□□□□□ -1.47
NPM1-207ENST00000521260 NUTM2BA6NNL0 878 aaPredicted RBP5.87□□□□□ -1.47
NPM1-207ENST00000521260 NUTM2EB1AL46 878 aaPredicted RBP5.87□□□□□ -1.47
NPM1-207ENST00000521260 F8VZ95 297 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 CDC45O75419 566 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 KRT38O76015 456 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 TBC1D8O95759 1140 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 MSL3P1P0C860 447 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 HOXB1P14653 301 aaPredicted RBP5.87□□□□□ -1.47
NPM1-207ENST00000521260 IDO1P14902 403 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 NAT1P18440 290 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 PTGS1P23219 599 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 NEK2P51955 445 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 CTDSPL2Q05D32 466 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 APOBRQ0VD83 1088 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 PROX2Q3B8N5 592 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 CCDC152Q4G0S7 254 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 CCDC93Q567U6 631 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 NUTM2DQ5VT03 806 aaPredicted RBP5.87□□□□□ -1.47
NPM1-207ENST00000521260 CDCA2Q69YH5 1023 aaPredicted RBP5.87□□□□□ -1.47
NPM1-207ENST00000521260 CPLX2Q6PUV4 134 aaKnown RBP5.87□□□□□ -1.47
NPM1-207ENST00000521260 MTHFD1LQ6UB35 978 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 CATIPQ7Z7H3 387 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 RSPH3Q86UC2 560 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 FCHSD1Q86WN1 690 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 NUTM2AQ8IVF1 878 aaPredicted RBP5.87□□□□□ -1.47
NPM1-207ENST00000521260 LRRC8AQ8IWT6 810 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 SPC24Q8NBT2 197 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 ZNF280CQ8ND82 737 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 GOLGA1Q92805 767 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 TMX3Q96JJ7 454 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 SCLT1Q96NL6 688 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 FMNL2Q96PY5 1086 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms