RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 COL6A1P12109 1028 aa11.76□□□□□ -0.53
PVT1-210ENST00000521122 CDCA8Q53HL2 280 aa11.76□□□□□ -0.53
PVT1-210ENST00000521122 KHSRPQ92945 711 aaKnown RBP eCLIP11.76□□□□□ -0.53
PVT1-210ENST00000521122 LTBP2Q14767 1821 aa11.75□□□□□ -0.53
PVT1-210ENST00000521122 KRT37O76014 449 aa11.75□□□□□ -0.53
PVT1-210ENST00000521122 VGLL4Q14135 290 aa11.75□□□□□ -0.53
PVT1-210ENST00000521122 GGA1Q9UJY5 639 aa11.75□□□□□ -0.53
PVT1-210ENST00000521122 SPDYE5A6NIY4 337 aa11.74□□□□□ -0.53
PVT1-210ENST00000521122 PI4K2BG5E9Z4 385 aa11.74□□□□□ -0.53
PVT1-210ENST00000521122 SNAPC2Q13487 334 aa11.74□□□□□ -0.53
PVT1-210ENST00000521122 AAK1Q2M2I8 961 aa11.74□□□□□ -0.53
PVT1-210ENST00000521122 SIN3AQ96ST3 1273 aa11.74□□□□□ -0.53
PVT1-210ENST00000521122 BCRP11274 1271 aa11.73□□□□□ -0.53
PVT1-210ENST00000521122 PTPRZ1P23471 2315 aaPredicted RBP11.73□□□□□ -0.53
PVT1-210ENST00000521122 CCDC85BQ15834 202 aaPredicted RBP11.73□□□□□ -0.53
PVT1-210ENST00000521122 ZFHX2Q9C0A1 2572 aaPredicted RBP11.73□□□□□ -0.53
PVT1-210ENST00000521122 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
PVT1-210ENST00000521122 ZNF576Q9H609 170 aa11.73□□□□□ -0.53
PVT1-210ENST00000521122 ANKIB1Q9P2G1 1089 aa11.73□□□□□ -0.53
PVT1-210ENST00000521122 ECM29Q5VYK3 1845 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 CHD6Q8TD26 2715 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 RGS20O76081 388 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 U2AF1L5P0DN76 240 aaPredicted RBP11.72□□□□□ -0.53
PVT1-210ENST00000521122 DNAJB2P25686 324 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 KCNQ1P51787 676 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 U2AF1Q01081 240 aaKnown RBP eCLIP11.72□□□□□ -0.53
PVT1-210ENST00000521122 STRIP1Q5VSL9 837 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 ANKRD23Q86SG2 305 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 HMX1Q9NP08 348 aaPredicted RBP11.72□□□□□ -0.53
PVT1-210ENST00000521122 PRKAG2Q9UGJ0 569 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 CSADQ9Y600 493 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 MAST2Q6P0Q8 1798 aa11.72□□□□□ -0.53
PVT1-210ENST00000521122 TPRP12270 2363 aaKnown RBP11.71□□□□□ -0.53
PVT1-210ENST00000521122 CHD7Q9P2D1 2997 aa11.71□□□□□ -0.53
PVT1-210ENST00000521122 PDHXO00330 501 aa11.71□□□□□ -0.53
PVT1-210ENST00000521122 IRF6O14896 467 aa11.71□□□□□ -0.53
PVT1-210ENST00000521122 TFF2Q03403 129 aa11.71□□□□□ -0.53
PVT1-210ENST00000521122 ERMP1Q7Z2K6 904 aa11.71□□□□□ -0.53
PVT1-210ENST00000521122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.71□□□□□ -0.53
PVT1-210ENST00000521122 RRP7AQ9Y3A4 280 aaKnown RBP11.71□□□□□ -0.53
PVT1-210ENST00000521122 ZNF318Q5VUA4 2279 aa11.7□□□□□ -0.54
PVT1-210ENST00000521122 HMGCRP04035 888 aa11.7□□□□□ -0.54
PVT1-210ENST00000521122 ITGB8P26012 769 aa11.7□□□□□ -0.54
PVT1-210ENST00000521122 RPS8P62241 208 aaKnown RBP11.7□□□□□ -0.54
PVT1-210ENST00000521122 SF3B3Q15393 1217 aaKnown RBP11.7□□□□□ -0.54
PVT1-210ENST00000521122 DLGAP5Q15398 846 aa11.7□□□□□ -0.54
PVT1-210ENST00000521122 KIAA0825Q8IV33 1275 aa11.7□□□□□ -0.54
PVT1-210ENST00000521122 FBXW7Q969H0 707 aa11.7□□□□□ -0.54
PVT1-210ENST00000521122 PHOX2BQ99453 314 aa11.7□□□□□ -0.54
PVT1-210ENST00000521122 TRMT112Q9UI30 125 aaKnown RBP11.7□□□□□ -0.54
PVT1-210ENST00000521122 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
PVT1-210ENST00000521122 DOCK3Q8IZD9 2030 aa11.7□□□□□ -0.54
PVT1-210ENST00000521122 CFAP47Q6ZTR5 3102 aa11.7□□□□□ -0.54
PVT1-210ENST00000521122 MYL6BP14649 208 aa11.69□□□□□ -0.54
PVT1-210ENST00000521122 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
PVT1-210ENST00000521122 RASA3Q14644 834 aa11.69□□□□□ -0.54
PVT1-210ENST00000521122 RIC3Q7Z5B4 369 aa11.69□□□□□ -0.54
PVT1-210ENST00000521122 NLRP10Q86W26 655 aa11.69□□□□□ -0.54
PVT1-210ENST00000521122 ERO1BQ86YB8 467 aa11.69□□□□□ -0.54
PVT1-210ENST00000521122 UIMC1Q96RL1 719 aa11.69□□□□□ -0.54
PVT1-210ENST00000521122 ANKRD11Q6UB99 2663 aaPredicted RBP11.68□□□□□ -0.54
PVT1-210ENST00000521122 CLRN2A0PK11 232 aa11.68□□□□□ -0.54
PVT1-210ENST00000521122 TNPO2O14787 897 aaKnown RBP11.68□□□□□ -0.54
PVT1-210ENST00000521122 MYO1BO43795 1136 aa11.68□□□□□ -0.54
PVT1-210ENST00000521122 PPIL2Q13356 520 aa11.68□□□□□ -0.54
PVT1-210ENST00000521122 ADGRE1Q14246 886 aa11.68□□□□□ -0.54
PVT1-210ENST00000521122 TIFAQ96CG3 184 aa11.68□□□□□ -0.54
PVT1-210ENST00000521122 PARK7Q99497 189 aaKnown RBP11.68□□□□□ -0.54
PVT1-210ENST00000521122 PRDM12Q9H4Q4 367 aa11.68□□□□□ -0.54
PVT1-210ENST00000521122 VEZTQ9HBM0 779 aa11.68□□□□□ -0.54
PVT1-210ENST00000521122 SNCAIPQ9Y6H5 919 aa11.68□□□□□ -0.54
PVT1-210ENST00000521122 RNPC3Q96LT9 517 aaKnown RBP11.66□□□□□ -0.54
PVT1-210ENST00000521122 XDHP47989 1333 aa11.65□□□□□ -0.54
PVT1-210ENST00000521122 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.65□□□□□ -0.54
PVT1-210ENST00000521122 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.65□□□□□ -0.54
PVT1-210ENST00000521122 ERC2O15083 957 aa11.65□□□□□ -0.54
PVT1-210ENST00000521122 IGFBP4P22692 258 aa11.65□□□□□ -0.54
PVT1-210ENST00000521122 TRIM32Q13049 653 aa11.65□□□□□ -0.54
PVT1-210ENST00000521122 HSP90AB3PQ58FF7 597 aa11.65□□□□□ -0.54
PVT1-210ENST00000521122 BADQ92934 168 aa11.65□□□□□ -0.54
PVT1-210ENST00000521122 PCDHAC2Q9Y5I4 1007 aa11.65□□□□□ -0.54
PVT1-210ENST00000521122 MED23Q9ULK4 1368 aa11.65□□□□□ -0.55
PVT1-210ENST00000521122 RIF1Q5UIP0 2472 aaKnown RBP11.64□□□□□ -0.55
PVT1-210ENST00000521122 LRRC37A2A6NM11 1700 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 SPDYE2BA6NHP3 402 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 TLL1O43897 1013 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 SPDYE6P0CI01 402 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 ATP2B4P23634 1241 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 TNFAIP1Q13829 316 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 TTLL5Q6EMB2 1281 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 COA7Q96BR5 231 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 TEPSINQ96N21 525 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 KCNH4Q9UQ05 1017 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 TRANK1O15050 2925 aa11.64□□□□□ -0.55
PVT1-210ENST00000521122 AOX1Q06278 1338 aa11.63□□□□□ -0.55
PVT1-210ENST00000521122 CYP2C8P10632 490 aa11.63□□□□□ -0.55
PVT1-210ENST00000521122 CSPP1Q1MSJ5 1256 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms