RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 KCNQ4P56696 695 aa30.17■■■□□ 2.42
COL13A1-213ENST00000520267 CHRNDQ07001 517 aa30.17■■■□□ 2.42
COL13A1-213ENST00000520267 MAP3K12Q12852 859 aa30.17■■■□□ 2.42
COL13A1-213ENST00000520267 DDX19AQ9NUU7 478 aaKnown RBP30.17■■■□□ 2.42
COL13A1-213ENST00000520267 ILDR1Q86SU0 546 aaPredicted RBP30.17■■■□□ 2.42
COL13A1-213ENST00000520267 TNMDQ9H2S6 317 aa30.17■■■□□ 2.42
COL13A1-213ENST00000520267 CLSTN2Q9H4D0 955 aa30.16■■■□□ 2.42
COL13A1-213ENST00000520267 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.16■■■□□ 2.42
COL13A1-213ENST00000520267 RCOR1Q9UKL0 485 aa30.16■■■□□ 2.42
COL13A1-213ENST00000520267 C4AP0C0L4 1744 aa30.16■■■□□ 2.42
COL13A1-213ENST00000520267 C4BP0C0L5 1744 aa30.16■■■□□ 2.42
COL13A1-213ENST00000520267 USP28Q96RU2 1077 aa30.16■■■□□ 2.42
COL13A1-213ENST00000520267 EPB41L4AQ9HCS5 686 aaPredicted RBP30.16■■■□□ 2.42
COL13A1-213ENST00000520267 ZNF831Q5JPB2 1677 aa30.16■■■□□ 2.42
COL13A1-213ENST00000520267 MBD4O95243 580 aa30.15■■■□□ 2.42
COL13A1-213ENST00000520267 CKAP2LQ8IYA6 745 aa30.15■■■□□ 2.42
COL13A1-213ENST00000520267 ZKSCAN5Q9Y2L8 839 aa30.15■■■□□ 2.42
COL13A1-213ENST00000520267 PATL2C9JE40 543 aaKnown RBP30.15■■■□□ 2.42
COL13A1-213ENST00000520267 DHX16O60231 1041 aaKnown RBP30.15■■■□□ 2.42
COL13A1-213ENST00000520267 ALX1Q15699 326 aa30.15■■■□□ 2.42
COL13A1-213ENST00000520267 ERFEQ4G0M1 354 aa30.15■■■□□ 2.42
COL13A1-213ENST00000520267 OTUD7BQ6GQQ9 843 aa30.15■■■□□ 2.42
COL13A1-213ENST00000520267 CLEC4GQ6UXB4 293 aa30.15■■■□□ 2.42
COL13A1-213ENST00000520267 KDM4AO75164 1064 aa30.14■■■□□ 2.42
COL13A1-213ENST00000520267 ADCY5O95622 1261 aa30.14■■■□□ 2.42
COL13A1-213ENST00000520267 C3orf67Q6ZVT6 689 aa30.14■■■□□ 2.42
COL13A1-213ENST00000520267 ARMT1Q9H993 441 aa30.14■■■□□ 2.42
COL13A1-213ENST00000520267 TAF1P21675 1872 aa30.14■■■□□ 2.42
COL13A1-213ENST00000520267 CASZ1Q86V15 1759 aa30.14■■■□□ 2.41
COL13A1-213ENST00000520267 TOM1O60784 492 aa30.13■■■□□ 2.41
COL13A1-213ENST00000520267 TYRO3Q06418 890 aa30.13■■■□□ 2.41
COL13A1-213ENST00000520267 IFNL3Q8IZI9 196 aa30.13■■■□□ 2.41
COL13A1-213ENST00000520267 NEDD4P46934 1319 aa30.13■■■□□ 2.41
COL13A1-213ENST00000520267 B4E1Z4 1266 aa30.13■■■□□ 2.41
COL13A1-213ENST00000520267 RBM43Q6ZSC3 357 aaKnown RBP30.13■■■□□ 2.41
COL13A1-213ENST00000520267 ZNF396Q96N95 335 aaPredicted RBP30.13■■■□□ 2.41
COL13A1-213ENST00000520267 ORC3Q9UBD5 711 aaPredicted RBP30.13■■■□□ 2.41
COL13A1-213ENST00000520267 ANGEL1Q9UNK9 670 aaKnown RBP30.13■■■□□ 2.41
COL13A1-213ENST00000520267 MRVI1Q9Y6F6 885 aa30.13■■■□□ 2.41
COL13A1-213ENST00000520267 BCL9LQ86UU0 1499 aa30.13■■■□□ 2.41
COL13A1-213ENST00000520267 SH2B2O14492 632 aaPredicted RBP30.12■■■□□ 2.41
COL13A1-213ENST00000520267 SMIM5Q71RC9 77 aa30.12■■■□□ 2.41
COL13A1-213ENST00000520267 INCENPQ9NQS7 918 aa30.12■■■□□ 2.41
COL13A1-213ENST00000520267 CHD4Q14839 1912 aa30.12■■■□□ 2.41
COL13A1-213ENST00000520267 PTMAP06454 111 aaKnown RBP30.12■■■□□ 2.41
COL13A1-213ENST00000520267 ATL3Q6DD88 541 aa30.12■■■□□ 2.41
COL13A1-213ENST00000520267 PTF1AQ7RTS3 328 aa30.12■■■□□ 2.41
COL13A1-213ENST00000520267 ZMYM6O95789 1325 aa30.11■■■□□ 2.41
COL13A1-213ENST00000520267 CPLX1O14810 134 aa30.11■■■□□ 2.41
COL13A1-213ENST00000520267 C8orf76Q96K31 380 aa30.11■■■□□ 2.41
COL13A1-213ENST00000520267 CDC5LQ99459 802 aaKnown RBP30.11■■■□□ 2.41
COL13A1-213ENST00000520267 C8orf37Q96NL8 207 aa30.11■■■□□ 2.41
COL13A1-213ENST00000520267 SENP2Q9HC62 589 aa30.11■■■□□ 2.41
COL13A1-213ENST00000520267 A0A1B0GUL6 1792 aa30.1■■■□□ 2.41
COL13A1-213ENST00000520267 NAPBQ9H115 298 aa30.1■■■□□ 2.41
COL13A1-213ENST00000520267 AP5Z1O43299 807 aa30.1■■■□□ 2.41
COL13A1-213ENST00000520267 CTDSPL2Q05D32 466 aa30.1■■■□□ 2.41
COL13A1-213ENST00000520267 GSG1L2A8MUP6 293 aa30.09■■■□□ 2.41
COL13A1-213ENST00000520267 PRKAB2O43741 272 aa30.09■■■□□ 2.41
COL13A1-213ENST00000520267 GJB4Q9NTQ9 266 aa30.09■■■□□ 2.41
COL13A1-213ENST00000520267 TACC3Q9Y6A5 838 aa30.09■■■□□ 2.41
COL13A1-213ENST00000520267 VPS72Q15906 364 aa30.08■■■□□ 2.41
COL13A1-213ENST00000520267 BICDL1Q6ZP65 573 aa30.08■■■□□ 2.41
COL13A1-213ENST00000520267 LCORLQ8N3X6 602 aa30.08■■■□□ 2.41
COL13A1-213ENST00000520267 NGLY1Q96IV0 654 aa30.08■■■□□ 2.41
COL13A1-213ENST00000520267 IQSEC3Q9UPP2 1182 aaPredicted RBP30.08■■■□□ 2.41
COL13A1-213ENST00000520267 ZNF500O60304 480 aaPredicted RBP30.08■■■□□ 2.41
COL13A1-213ENST00000520267 SF3B3Q15393 1217 aaKnown RBP30.08■■■□□ 2.41
COL13A1-213ENST00000520267 ANKRD18AQ8IVF6 992 aa30.08■■■□□ 2.41
COL13A1-213ENST00000520267 CCAR1Q8IX12 1150 aaKnown RBP30.08■■■□□ 2.41
COL13A1-213ENST00000520267 FBXO18Q8NFZ0 1043 aa30.08■■■□□ 2.41
COL13A1-213ENST00000520267 IGDCC4Q8TDY8 1250 aa30.08■■■□□ 2.41
COL13A1-213ENST00000520267 NAP1L5Q96NT1 182 aaPredicted RBP30.08■■■□□ 2.41
COL13A1-213ENST00000520267 WTIPA6NIX2 430 aaPredicted RBP30.07■■■□□ 2.4
COL13A1-213ENST00000520267 FAM200AQ8TCP9 573 aa30.07■■■□□ 2.4
COL13A1-213ENST00000520267 GOLPH3LQ9H4A5 285 aa30.07■■■□□ 2.4
COL13A1-213ENST00000520267 TMEM87BQ96K49 555 aa30.07■■■□□ 2.4
COL13A1-213ENST00000520267 RXRAP19793 462 aa30.06■■■□□ 2.4
COL13A1-213ENST00000520267 METAP2P50579 478 aaKnown RBP eCLIP30.06■■■□□ 2.4
COL13A1-213ENST00000520267 PLCB2Q00722 1185 aa30.06■■■□□ 2.4
COL13A1-213ENST00000520267 APOA5Q6Q788 366 aa30.06■■■□□ 2.4
COL13A1-213ENST00000520267 MPNDQ8N594 471 aa30.06■■■□□ 2.4
COL13A1-213ENST00000520267 BCL2L12Q9HB09 334 aa30.06■■■□□ 2.4
COL13A1-213ENST00000520267 LRP2BPQ9P2M1 347 aa30.06■■■□□ 2.4
COL13A1-213ENST00000520267 CNTNAP4Q9C0A0 1308 aa30.06■■■□□ 2.4
COL13A1-213ENST00000520267 TBC1D9BQ66K14 1250 aa30.06■■■□□ 2.4
COL13A1-213ENST00000520267 GYG1P46976 350 aa30.05■■■□□ 2.4
COL13A1-213ENST00000520267 ANO6Q4KMQ2 910 aa30.05■■■□□ 2.4
COL13A1-213ENST00000520267 SCN7AQ01118 1682 aa30.05■■■□□ 2.4
COL13A1-213ENST00000520267 PNPLA7Q6ZV29 1317 aa30.05■■■□□ 2.4
COL13A1-213ENST00000520267 TIAM2Q8IVF5 1701 aa30.05■■■□□ 2.4
COL13A1-213ENST00000520267 LY9Q9HBG7 655 aa30.05■■■□□ 2.4
COL13A1-213ENST00000520267 SLC4A4Q9Y6R1 1079 aa30.05■■■□□ 2.4
COL13A1-213ENST00000520267 CDC27P30260 824 aa30.04■■■□□ 2.4
COL13A1-213ENST00000520267 MIGA1Q8NAN2 632 aa30.04■■■□□ 2.4
COL13A1-213ENST00000520267 RTEL1Q9NZ71 1219 aa30.04■■■□□ 2.4
COL13A1-213ENST00000520267 ZSWIM5Q9P217 1185 aa30.04■■■□□ 2.4
COL13A1-213ENST00000520267 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.04■■■□□ 2.4
COL13A1-213ENST00000520267 ZNF804BA4D1E1 1349 aa30.04■■■□□ 2.4
COL13A1-213ENST00000520267 POLR3DP05423 398 aaPredicted RBP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms