RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 STRBPQ96SI9 672 aaKnown RBP9.91□□□□□ -0.82
HMGB4-203ENST00000519684 RBSNQ9H1K0 784 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 BCL2L12Q9HB09 334 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 SRP68Q9UHB9 627 aaKnown RBP9.91□□□□□ -0.82
HMGB4-203ENST00000519684 SBF2Q86WG5 1849 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 ELP1O95163 1332 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 KLF18A0A0U1RQI7 1052 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 GOLGA6L4A6NEF3 574 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 GOLGA8BA8MQT2 603 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 PATL2C9JE40 543 aaKnown RBP9.9□□□□□ -0.82
HMGB4-203ENST00000519684 EVCP57679 992 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 ALX1Q15699 326 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 FAM182BQ5T319 152 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 C3orf67Q6ZVT6 689 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 SPATA32Q96LK8 384 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 NACAP1Q9BZK3 213 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 NAPBQ9H115 298 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 NCOA5Q9HCD5 579 aaKnown RBP9.9□□□□□ -0.82
HMGB4-203ENST00000519684 C4BP0C0L5 1744 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 CHD4Q14839 1912 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 AFF2P51816 1311 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 RESTQ13127 1097 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 TPTE2Q6XPS3 522 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 MYH15Q9Y2K3 1946 aa9.9□□□□□ -0.82
HMGB4-203ENST00000519684 COL4A1P02462 1669 aa9.9□□□□□ -0.83
HMGB4-203ENST00000519684 C4AP0C0L4 1744 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 CTDNEP1O95476 244 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 RFC4P35249 363 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 FOSBP53539 338 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 SMIM5Q71RC9 77 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 ARMT1Q9H993 441 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 CFAP45Q9UL16 551 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 MINPP1Q9UNW1 487 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 TAF1P21675 1872 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 ZNF804BA4D1E1 1349 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 CPLX1O14810 134 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 TDO2P48775 406 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 ANTXR2P58335 489 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 FAM173BQ6P4H8 233 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 TTC6Q86TZ1 520 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 TBC1D10CQ8IV04 446 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 IFNL3Q8IZI9 196 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 ANKRD2Q9GZV1 360 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 CNNM2Q9H8M5 875 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 TRPC5Q9UL62 973 aaPredicted RBP9.89□□□□□ -0.83
HMGB4-203ENST00000519684 DENND2AQ9ULE3 1009 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 TIAM2Q8IVF5 1701 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 CARMIL3Q8ND23 1372 aa9.89□□□□□ -0.83
HMGB4-203ENST00000519684 PNPLA7Q6ZV29 1317 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 SALL1Q9NSC2 1324 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 GYG1P46976 350 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 RPS8P62241 208 aaKnown RBP9.88□□□□□ -0.83
HMGB4-203ENST00000519684 TRAPPC3LQ5T215 181 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 CERKQ8TCT0 537 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 CELF1Q92879 486 aaKnown RBP9.88□□□□□ -0.83
HMGB4-203ENST00000519684 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
HMGB4-203ENST00000519684 TMEM87BQ96K49 555 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 PPP1R9BQ96SB3 815 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 NBPF3Q9H094 633 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 GPHNQ9NQX3 736 aaPredicted RBP9.88□□□□□ -0.83
HMGB4-203ENST00000519684 RAI14Q9P0K7 980 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 TFIP11Q9UBB9 837 aaKnown RBP9.88□□□□□ -0.83
HMGB4-203ENST00000519684 ABCF2Q9UG63 623 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 ANGEL1Q9UNK9 670 aaKnown RBP9.88□□□□□ -0.83
HMGB4-203ENST00000519684 IQSEC3Q9UPP2 1182 aaPredicted RBP9.88□□□□□ -0.83
HMGB4-203ENST00000519684 SLC4A4Q9Y6R1 1079 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 MYH13Q9UKX3 1938 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 CYP7A1P22680 504 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 LEO1Q8WVC0 666 aaPredicted RBP9.88□□□□□ -0.83
HMGB4-203ENST00000519684 ZNF396Q96N95 335 aaPredicted RBP9.88□□□□□ -0.83
HMGB4-203ENST00000519684 KRT23Q9C075 422 aa9.88□□□□□ -0.83
HMGB4-203ENST00000519684 B4E1Z4 1266 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 SH2B2O14492 632 aaPredicted RBP9.87□□□□□ -0.83
HMGB4-203ENST00000519684 SEMA3EO15041 775 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 CDKL5O76039 1030 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 CPLX2Q6PUV4 134 aaKnown RBP9.87□□□□□ -0.83
HMGB4-203ENST00000519684 NFXL1Q6ZNB6 911 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 HOMEZQ8IX15 550 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 SEPT12Q8IYM1 358 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 LCORLQ8N3X6 602 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 EPB41L4AQ9HCS5 686 aaPredicted RBP9.87□□□□□ -0.83
HMGB4-203ENST00000519684 MAGEB6P1A0A0J9YX57 407 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 GSG1L2A8MUP6 293 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 HSPA1LP34931 641 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 ATL3Q6DD88 541 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 MFSD6Q6ZSS7 791 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 CYB5R4Q7L1T6 521 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 MIGA1Q8NAN2 632 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 RNF214Q8ND24 703 aa9.87□□□□□ -0.83
HMGB4-203ENST00000519684 NEDD4P46934 1319 aa9.86□□□□□ -0.83
HMGB4-203ENST00000519684 METAP2P50579 478 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMGB4-203ENST00000519684 CTDSPL2Q05D32 466 aa9.86□□□□□ -0.83
HMGB4-203ENST00000519684 TMEM67Q5HYA8 995 aa9.86□□□□□ -0.83
HMGB4-203ENST00000519684 AKNAD1Q5T1N1 836 aa9.86□□□□□ -0.83
HMGB4-203ENST00000519684 FAM196AQ6ZSG2 479 aa9.86□□□□□ -0.83
HMGB4-203ENST00000519684 BICD2Q8TD16 824 aa9.86□□□□□ -0.83
HMGB4-203ENST00000519684 C8orf76Q96K31 380 aa9.86□□□□□ -0.83
HMGB4-203ENST00000519684 BCL11BQ9C0K0 894 aaPredicted RBP9.86□□□□□ -0.83
HMGB4-203ENST00000519684 RNF41Q9H4P4 317 aaPredicted RBP9.86□□□□□ -0.83
HMGB4-203ENST00000519684 ORC3Q9UBD5 711 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms