RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 BAG6P46379 1132 aa27.75■■■□□ 2.03
SLIT3-204ENST00000518140 Q6ZUG5 572 aa27.75■■■□□ 2.03
SLIT3-204ENST00000518140 ZDHHC9Q9Y397 364 aa27.75■■■□□ 2.03
SLIT3-204ENST00000518140 ATP2B4P23634 1241 aa27.74■■■□□ 2.03
SLIT3-204ENST00000518140 CHST3Q7LGC8 479 aa27.74■■■□□ 2.03
SLIT3-204ENST00000518140 CCDC83Q8IWF9 413 aa27.74■■■□□ 2.03
SLIT3-204ENST00000518140 TBC1D16Q8TBP0 767 aa27.74■■■□□ 2.03
SLIT3-204ENST00000518140 GSG1L2A8MUP6 293 aa27.74■■■□□ 2.03
SLIT3-204ENST00000518140 PATL2C9JE40 543 aaKnown RBP27.74■■■□□ 2.03
SLIT3-204ENST00000518140 ZNF213O14771 459 aa27.74■■■□□ 2.03
SLIT3-204ENST00000518140 PRDX5P30044 214 aa27.74■■■□□ 2.03
SLIT3-204ENST00000518140 EXOSC10Q01780 885 aaKnown RBP27.74■■■□□ 2.03
SLIT3-204ENST00000518140 C15orf52Q6ZUT6 534 aaKnown RBP27.74■■■□□ 2.03
SLIT3-204ENST00000518140 DHX32Q7L7V1 743 aaKnown RBP27.74■■■□□ 2.03
SLIT3-204ENST00000518140 SP8Q8IXZ3 490 aa27.74■■■□□ 2.03
SLIT3-204ENST00000518140 TDRD7Q8NHU6 1098 aaKnown RBP27.74■■■□□ 2.03
SLIT3-204ENST00000518140 PODXL2Q9NZ53 605 aa27.74■■■□□ 2.03
SLIT3-204ENST00000518140 PDS5AQ29RF7 1337 aaKnown RBP27.73■■■□□ 2.03
SLIT3-204ENST00000518140 IFNL3Q8IZI9 196 aa27.73■■■□□ 2.03
SLIT3-204ENST00000518140 ZSCAN31Q96LW9 406 aaPredicted RBP27.73■■■□□ 2.03
SLIT3-204ENST00000518140 MECOMQ03112 1051 aa27.72■■■□□ 2.03
SLIT3-204ENST00000518140 ATP6V0A2Q9Y487 856 aa27.72■■■□□ 2.03
SLIT3-204ENST00000518140 ANKRD1Q15327 319 aa27.72■■■□□ 2.03
SLIT3-204ENST00000518140 NKX2-3Q8TAU0 364 aa27.72■■■□□ 2.03
SLIT3-204ENST00000518140 NSUN4Q96CB9 384 aaKnown RBP27.72■■■□□ 2.03
SLIT3-204ENST00000518140 SLC4A4Q9Y6R1 1079 aa27.72■■■□□ 2.03
SLIT3-204ENST00000518140 HMGB1P09429 215 aaKnown RBP27.71■■■□□ 2.03
SLIT3-204ENST00000518140 DYNLL1P63167 89 aaKnown RBP27.71■■■□□ 2.03
SLIT3-204ENST00000518140 NAA16Q6N069 864 aaPredicted RBP27.71■■■□□ 2.03
SLIT3-204ENST00000518140 SH2B1Q9NRF2 756 aaPredicted RBP27.71■■■□□ 2.03
SLIT3-204ENST00000518140 CACNA1SQ13698 1873 aa27.71■■■□□ 2.03
SLIT3-204ENST00000518140 MCM4P33991 863 aa27.71■■■□□ 2.03
SLIT3-204ENST00000518140 ALX1Q15699 326 aa27.71■■■□□ 2.03
SLIT3-204ENST00000518140 ZNF804AQ7Z570 1209 aa27.71■■■□□ 2.03
SLIT3-204ENST00000518140 LAMA4Q16363 1823 aa27.7■■■□□ 2.03
SLIT3-204ENST00000518140 C6orf229H3BNL8 230 aa27.7■■■□□ 2.02
SLIT3-204ENST00000518140 NUCB2P80303 420 aa27.7■■■□□ 2.02
SLIT3-204ENST00000518140 TBC1D10CQ8IV04 446 aa27.7■■■□□ 2.02
SLIT3-204ENST00000518140 MASTLQ96GX5 879 aa27.7■■■□□ 2.02
SLIT3-204ENST00000518140 RIOK1Q9BRS2 568 aaKnown RBP27.7■■■□□ 2.02
SLIT3-204ENST00000518140 MAGEB6P1A0A0J9YX57 407 aa27.69■■■□□ 2.02
SLIT3-204ENST00000518140 GRIK5Q16478 980 aa27.69■■■□□ 2.02
SLIT3-204ENST00000518140 BRF1Q92994 677 aa27.69■■■□□ 2.02
SLIT3-204ENST00000518140 ZNF622Q969S3 477 aaKnown RBP eCLIP27.69■■■□□ 2.02
SLIT3-204ENST00000518140 CD209Q9NNX6 404 aa27.69■■■□□ 2.02
SLIT3-204ENST00000518140 INCENPQ9NQS7 918 aa27.69■■■□□ 2.02
SLIT3-204ENST00000518140 STK3Q13188 491 aa27.69■■■□□ 2.02
SLIT3-204ENST00000518140 C2CD5Q86YS7 1000 aa27.69■■■□□ 2.02
SLIT3-204ENST00000518140 ALDH1B1P30837 517 aa27.68■■■□□ 2.02
SLIT3-204ENST00000518140 FOXD4L5Q5VV16 416 aaPredicted RBP27.68■■■□□ 2.02
SLIT3-204ENST00000518140 TMC4Q7Z404 712 aa27.68■■■□□ 2.02
SLIT3-204ENST00000518140 FOXD4L4Q8WXT5 416 aaPredicted RBP27.68■■■□□ 2.02
SLIT3-204ENST00000518140 GPHNQ9NQX3 736 aaPredicted RBP27.68■■■□□ 2.02
SLIT3-204ENST00000518140 COL11A2P13942 1736 aaPredicted RBP27.68■■■□□ 2.02
SLIT3-204ENST00000518140 ZBTB22O15209 634 aa27.68■■■□□ 2.02
SLIT3-204ENST00000518140 SDR42E1Q8WUS8 393 aa27.68■■■□□ 2.02
SLIT3-204ENST00000518140 CHRNA5P30532 468 aa27.67■■■□□ 2.02
SLIT3-204ENST00000518140 NAPBQ9H115 298 aa27.67■■■□□ 2.02
SLIT3-204ENST00000518140 TACC3Q9Y6A5 838 aa27.67■■■□□ 2.02
SLIT3-204ENST00000518140 MB21D2Q8IYB1 491 aaPredicted RBP27.66■■■□□ 2.02
SLIT3-204ENST00000518140 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.66■■■□□ 2.02
SLIT3-204ENST00000518140 MYH13Q9UKX3 1938 aa27.66■■■□□ 2.02
SLIT3-204ENST00000518140 GNAT2P19087 354 aa27.66■■■□□ 2.02
SLIT3-204ENST00000518140 FGD1P98174 961 aa27.66■■■□□ 2.02
SLIT3-204ENST00000518140 BRPF3Q9ULD4 1205 aa27.66■■■□□ 2.02
SLIT3-204ENST00000518140 RIMBP2O15034 1052 aa27.65■■■□□ 2.02
SLIT3-204ENST00000518140 ANTXR2P58335 489 aa27.65■■■□□ 2.02
SLIT3-204ENST00000518140 CTDSPL2Q05D32 466 aa27.65■■■□□ 2.02
SLIT3-204ENST00000518140 APOBRQ0VD83 1088 aa27.65■■■□□ 2.02
SLIT3-204ENST00000518140 AGXT2Q9BYV1 514 aa27.65■■■□□ 2.02
SLIT3-204ENST00000518140 SMC3Q9UQE7 1217 aa27.65■■■□□ 2.02
SLIT3-204ENST00000518140 IL1R1P14778 569 aa27.64■■■□□ 2.02
SLIT3-204ENST00000518140 WDR66Q8TBY9 1149 aa27.64■■■□□ 2.02
SLIT3-204ENST00000518140 LRRC37AA6NMS7 1700 aa27.64■■■□□ 2.02
SLIT3-204ENST00000518140 H0YIN7 160 aa27.64■■■□□ 2.01
SLIT3-204ENST00000518140 MPNDQ8N594 471 aa27.64■■■□□ 2.01
SLIT3-204ENST00000518140 NCOA7Q8NI08 942 aa27.64■■■□□ 2.01
SLIT3-204ENST00000518140 CHAMP1Q96JM3 812 aa27.64■■■□□ 2.01
SLIT3-204ENST00000518140 ZMYM6O95789 1325 aa27.64■■■□□ 2.01
SLIT3-204ENST00000518140 LTBP1Q14766 1721 aa27.64■■■□□ 2.01
SLIT3-204ENST00000518140 TDO2P48775 406 aa27.63■■■□□ 2.01
SLIT3-204ENST00000518140 SALL1Q9NSC2 1324 aa27.63■■■□□ 2.01
SLIT3-204ENST00000518140 SMIM22K7EJ46 135 aa27.63■■■□□ 2.01
SLIT3-204ENST00000518140 AATFQ9NY61 560 aaKnown RBP eCLIP27.63■■■□□ 2.01
SLIT3-204ENST00000518140 PRC1O43663 620 aa27.62■■■□□ 2.01
SLIT3-204ENST00000518140 BRD1O95696 1058 aa27.62■■■□□ 2.01
SLIT3-204ENST00000518140 GJB2P29033 226 aa27.62■■■□□ 2.01
SLIT3-204ENST00000518140 NACAP1Q9BZK3 213 aa27.62■■■□□ 2.01
SLIT3-204ENST00000518140 LDHBP07195 334 aaKnown RBP27.61■■■□□ 2.01
SLIT3-204ENST00000518140 SPTY2D1Q68D10 685 aaPredicted RBP27.61■■■□□ 2.01
SLIT3-204ENST00000518140 NEDD4P46934 1319 aa27.61■■■□□ 2.01
SLIT3-204ENST00000518140 GOLGB1Q14789 3259 aaKnown RBP27.61■■■□□ 2.01
SLIT3-204ENST00000518140 BAG4O95429 457 aaKnown RBP27.61■■■□□ 2.01
SLIT3-204ENST00000518140 MCM5P33992 734 aa27.61■■■□□ 2.01
SLIT3-204ENST00000518140 CYB5R4Q7L1T6 521 aa27.61■■■□□ 2.01
SLIT3-204ENST00000518140 RALYLQ86SE5 291 aaKnown RBP27.61■■■□□ 2.01
SLIT3-204ENST00000518140 DZIP1Q86YF9 867 aaKnown RBP27.61■■■□□ 2.01
SLIT3-204ENST00000518140 STK11IPQ8N1F8 1099 aa27.61■■■□□ 2.01
SLIT3-204ENST00000518140 ZNF219Q9P2Y4 722 aaPredicted RBP27.61■■■□□ 2.01
SLIT3-204ENST00000518140 DPP8Q6V1X1 898 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms