RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 NUDCQ9Y266 331 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 PPME1Q9Y570 386 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 PCDHGA11Q9Y5H2 935 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 TLL2Q9Y6L7 1015 aa3.61□□□□□ -1.83
SKP1-204ENST00000517691 ABCA3Q99758 1704 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 MAGEB6P1A0A0J9YX57 407 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 SOWAHDA6NJG2 315 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 ESPNB1AK53 854 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 ANP32CO43423 234 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 HYAL3O43820 417 aaPredicted RBP3.6□□□□□ -1.83
SKP1-204ENST00000517691 HMOX1P09601 288 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 IL13P35225 146 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 SERPINB4P48594 390 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 DOC2BQ14184 412 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 OCLNQ16625 522 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 SWI5Q1ZZU3 235 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 FAM196AQ6ZSG2 479 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 TRIM50Q86XT4 487 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 ZNF511Q8NB15 262 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 ZCRB1Q8TBF4 217 aaKnown RBP3.6□□□□□ -1.83
SKP1-204ENST00000517691 C1QTNF2Q9BXJ5 285 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 MKL2Q9ULH7 1088 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 DOLKQ9UPQ8 538 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 SUGT1Q9Y2Z0 365 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 PLCH1Q4KWH8 1693 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 CDK12Q9NYV4 1490 aaPredicted RBP3.6□□□□□ -1.83
SKP1-204ENST00000517691 SFI1A8K8P3 1242 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 TRIM37O94972 964 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 U2AF1L5P0DN76 240 aaPredicted RBP3.6□□□□□ -1.83
SKP1-204ENST00000517691 GTF2IP78347 998 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 U2AF1Q01081 240 aaKnown RBP eCLIP3.6□□□□□ -1.83
SKP1-204ENST00000517691 OXLD1Q5BKU9 147 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 TAS1R3Q7RTX0 852 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 MARCH10Q8NA82 808 aaPredicted RBP3.6□□□□□ -1.83
SKP1-204ENST00000517691 C1orf216Q8TAB5 229 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 SYTL4Q96C24 671 aaPredicted RBP3.6□□□□□ -1.83
SKP1-204ENST00000517691 ACSBG1Q96GR2 724 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 CCDC136Q96JN2 1154 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 SPG7Q9UQ90 795 aa3.6□□□□□ -1.83
SKP1-204ENST00000517691 GLI3P10071 1580 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 MARF1Q9Y4F3 1742 aaKnown RBP3.59□□□□□ -1.83
SKP1-204ENST00000517691 CRYBG1Q9Y4K1 1723 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 LMO7Q8WWI1 1683 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 PRMT3O60678 531 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 APBA3O96018 575 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 ATP1A2P50993 1020 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 PLEKHO1Q53GL0 409 aaPredicted RBP3.59□□□□□ -1.83
SKP1-204ENST00000517691 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 CCDC102BQ68D86 513 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 BPHLQ86WA6 291 aaPredicted RBP3.59□□□□□ -1.83
SKP1-204ENST00000517691 VTI1AQ96AJ9 217 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 GPATCH3Q96I76 525 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 PRIMPOLQ96LW4 560 aa3.59□□□□□ -1.83
SKP1-204ENST00000517691 PRKRIP1Q9H875 184 aaPredicted RBP3.59□□□□□ -1.83
SKP1-204ENST00000517691 NWD2Q9ULI1 1742 aa3.59□□□□□ -1.84
SKP1-204ENST00000517691 MYBBP1AQ9BQG0 1328 aaKnown RBP3.59□□□□□ -1.84
SKP1-204ENST00000517691 KIF20BQ96Q89 1820 aa3.59□□□□□ -1.84
SKP1-204ENST00000517691 PIK3R2O00459 728 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 TPD52L2O43399 206 aaKnown RBP3.58□□□□□ -1.84
SKP1-204ENST00000517691 RECKO95980 971 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 NEFMP07197 916 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 SEC13P55735 322 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 WDR43Q15061 677 aaKnown RBP eCLIP3.58□□□□□ -1.84
SKP1-204ENST00000517691 AMOTQ4VCS5 1084 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 C1orf141Q5JVX7 400 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 ZNF530Q6P9A1 599 aaPredicted RBP3.58□□□□□ -1.84
SKP1-204ENST00000517691 VWA5B2Q8N398 1253 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 TPCN2Q8NHX9 752 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 CXXC1Q9P0U4 656 aaPredicted RBP3.58□□□□□ -1.84
SKP1-204ENST00000517691 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.58□□□□□ -1.84
SKP1-204ENST00000517691 IGSF1Q8N6C5 1336 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 ABCC6O95255 1503 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 PARD3Q8TEW0 1356 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 COL18A1P39060 1754 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 KCNQ2O43526 872 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 LGR5O75473 907 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 ADH1CP00326 375 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 ERCC3P19447 782 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 AGERQ15109 404 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 ECM1Q16610 540 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 RNF20Q5VTR2 975 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 DEFB132Q7Z7B7 95 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 CD163Q86VB7 1156 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 EXOC8Q8IYI6 725 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 TRMT44Q8IYL2 757 aaKnown RBP3.58□□□□□ -1.84
SKP1-204ENST00000517691 IFNL2Q8IZJ0 200 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 DNAJC2Q99543 621 aaKnown RBP3.58□□□□□ -1.84
SKP1-204ENST00000517691 BCL11AQ9H165 835 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 USP54Q70EL1 1684 aa3.58□□□□□ -1.84
SKP1-204ENST00000517691 PCDH11XQ9BZA7 1347 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 PCDH11YQ9BZA8 1340 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 NRAPQ86VF7 1730 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.57□□□□□ -1.84
SKP1-204ENST00000517691 OVOS2A0A0G2JMS6 1433 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 DISP2A7MBM2 1401 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 ANKRD33BA6NCL7 494 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 CYP27B1O15528 508 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 UPP2O95045 317 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 PRKAR2BP31323 418 aa3.57□□□□□ -1.84
SKP1-204ENST00000517691 PTSQ03393 145 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms