RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ARL4DP49703 201 aa6.94□□□□□ -1.3
CLDND1-228ENST00000513873 GRIK5Q16478 980 aa6.94□□□□□ -1.3
CLDND1-228ENST00000513873 USPL1Q5W0Q7 1092 aa6.94□□□□□ -1.3
CLDND1-228ENST00000513873 POP1Q99575 1024 aaKnown RBP6.94□□□□□ -1.3
CLDND1-228ENST00000513873 ZKSCAN3Q9BRR0 538 aa6.94□□□□□ -1.3
CLDND1-228ENST00000513873 KRTAP4-2Q9BYR5 136 aa6.94□□□□□ -1.3
CLDND1-228ENST00000513873 LIN7BQ9HAP6 207 aa6.94□□□□□ -1.3
CLDND1-228ENST00000513873 TRAK1Q9UPV9 953 aa6.94□□□□□ -1.3
CLDND1-228ENST00000513873 A0A0A0MRY4 1105 aa6.93□□□□□ -1.3
CLDND1-228ENST00000513873 ANKRD33BA6NCL7 494 aa6.93□□□□□ -1.3
CLDND1-228ENST00000513873 TRPA1O75762 1119 aa6.93□□□□□ -1.3
CLDND1-228ENST00000513873 CDC25BP30305 580 aa6.93□□□□□ -1.3
CLDND1-228ENST00000513873 COL9A3Q14050 684 aaPredicted RBP6.93□□□□□ -1.3
CLDND1-228ENST00000513873 DSC3Q14574 896 aa6.93□□□□□ -1.3
CLDND1-228ENST00000513873 ALG1LQ6GMV1 187 aa6.93□□□□□ -1.3
CLDND1-228ENST00000513873 BSNDQ8WZ55 320 aa6.93□□□□□ -1.3
CLDND1-228ENST00000513873 NXPE3Q969Y0 559 aa6.93□□□□□ -1.3
CLDND1-228ENST00000513873 NPHS2Q9NP85 383 aa6.93□□□□□ -1.3
CLDND1-228ENST00000513873 LATS2Q9NRM7 1088 aa6.93□□□□□ -1.3
CLDND1-228ENST00000513873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.93□□□□□ -1.3
CLDND1-228ENST00000513873 A0A1W2PP55 124 aa6.92□□□□□ -1.3
CLDND1-228ENST00000513873 LINC01387J3KSC0 135 aa6.92□□□□□ -1.3
CLDND1-228ENST00000513873 IGHA2P01877 340 aa6.92□□□□□ -1.3
CLDND1-228ENST00000513873 ACPPP15309 386 aa6.92□□□□□ -1.3
CLDND1-228ENST00000513873 SELPP16109 830 aa6.92□□□□□ -1.3
CLDND1-228ENST00000513873 ENOX2Q16206 610 aaKnown RBP6.92□□□□□ -1.3
CLDND1-228ENST00000513873 EAPPQ56P03 285 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-228ENST00000513873 KIAA0319Q5VV43 1072 aa6.92□□□□□ -1.3
CLDND1-228ENST00000513873 SLC51AQ86UW1 340 aa6.92□□□□□ -1.3
CLDND1-228ENST00000513873 ADAM19Q9H013 955 aa6.92□□□□□ -1.3
CLDND1-228ENST00000513873 BCL11AQ9H165 835 aa6.92□□□□□ -1.3
CLDND1-228ENST00000513873 PPRC1Q5VV67 1664 aaKnown RBP6.92□□□□□ -1.3
CLDND1-228ENST00000513873 PRG4Q92954 1404 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-228ENST00000513873 ADCY10Q96PN6 1610 aa6.91□□□□□ -1.3
CLDND1-228ENST00000513873 EIF4EBP3O60516 100 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-228ENST00000513873 FMR1Q06787 632 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLDND1-228ENST00000513873 COL19A1Q14993 1142 aa6.91□□□□□ -1.3
CLDND1-228ENST00000513873 PEAR1Q5VY43 1037 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-228ENST00000513873 FBXO11Q86XK2 927 aa6.91□□□□□ -1.3
CLDND1-228ENST00000513873 FMR1NBQ8N0W7 255 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-228ENST00000513873 DDX54Q8TDD1 881 aaKnown RBP6.91□□□□□ -1.3
CLDND1-228ENST00000513873 FBF1Q8TES7 1133 aa6.91□□□□□ -1.3
CLDND1-228ENST00000513873 ZFYVE1Q9HBF4 777 aa6.91□□□□□ -1.3
CLDND1-228ENST00000513873 SH2B1Q9NRF2 756 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-228ENST00000513873 ABCA5Q8WWZ7 1642 aa6.9□□□□□ -1.3
CLDND1-228ENST00000513873 H3BRJ5 948 aa6.9□□□□□ -1.3
CLDND1-228ENST00000513873 NFKBIEO00221 500 aa6.9□□□□□ -1.3
CLDND1-228ENST00000513873 LDHBP07195 334 aaKnown RBP6.9□□□□□ -1.3
CLDND1-228ENST00000513873 SSTR4P31391 388 aa6.9□□□□□ -1.3
CLDND1-228ENST00000513873 EPS8L3Q8TE67 593 aaKnown RBP6.9□□□□□ -1.3
CLDND1-228ENST00000513873 HHIPQ96QV1 700 aa6.9□□□□□ -1.3
CLDND1-228ENST00000513873 BHLHE41Q9C0J9 482 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-228ENST00000513873 SPG7Q9UQ90 795 aa6.9□□□□□ -1.3
CLDND1-228ENST00000513873 A0A096LPE4 126 aa6.89□□□□□ -1.31
CLDND1-228ENST00000513873 A0A1W2PPZ6 126 aa6.89□□□□□ -1.31
CLDND1-228ENST00000513873 PIP4K2BP78356 416 aa6.89□□□□□ -1.31
CLDND1-228ENST00000513873 IKBKEQ14164 716 aa6.89□□□□□ -1.31
CLDND1-228ENST00000513873 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.89□□□□□ -1.31
CLDND1-228ENST00000513873 CCNJLQ8IV13 435 aa6.89□□□□□ -1.31
CLDND1-228ENST00000513873 FAM9AQ8IZU1 332 aaPredicted RBP6.89□□□□□ -1.31
CLDND1-228ENST00000513873 KLHL23Q8NBE8 558 aa6.89□□□□□ -1.31
CLDND1-228ENST00000513873 SLC7A3Q8WY07 619 aa6.89□□□□□ -1.31
CLDND1-228ENST00000513873 WNT8BQ93098 351 aa6.89□□□□□ -1.31
CLDND1-228ENST00000513873 SEC31BQ9NQW1 1179 aa6.89□□□□□ -1.31
CLDND1-228ENST00000513873 GLI2P10070 1586 aa6.88□□□□□ -1.31
CLDND1-228ENST00000513873 GIPC1O14908 333 aa6.88□□□□□ -1.31
CLDND1-228ENST00000513873 FSCN2O14926 492 aa6.88□□□□□ -1.31
CLDND1-228ENST00000513873 P4HBP07237 508 aaKnown RBP6.88□□□□□ -1.31
CLDND1-228ENST00000513873 EPHA1P21709 976 aa6.88□□□□□ -1.31
CLDND1-228ENST00000513873 ITGAEP38570 1179 aa6.88□□□□□ -1.31
CLDND1-228ENST00000513873 TXNDC11Q6PKC3 985 aa6.88□□□□□ -1.31
CLDND1-228ENST00000513873 IGF2-ASQ6U949 168 aa6.88□□□□□ -1.31
CLDND1-228ENST00000513873 FRMD6Q96NE9 622 aa6.88□□□□□ -1.31
CLDND1-228ENST00000513873 OSGEPQ9NPF4 335 aa6.88□□□□□ -1.31
CLDND1-228ENST00000513873 SPATA31D1Q6ZQQ2 1576 aa6.87□□□□□ -1.31
CLDND1-228ENST00000513873 ABCA10Q8WWZ4 1543 aa6.87□□□□□ -1.31
CLDND1-228ENST00000513873 CD68P34810 354 aaPredicted RBP6.87□□□□□ -1.31
CLDND1-228ENST00000513873 C19orf57Q0VDD7 668 aa6.87□□□□□ -1.31
CLDND1-228ENST00000513873 TRIM26Q12899 539 aaPredicted RBP6.87□□□□□ -1.31
CLDND1-228ENST00000513873 DTHD1Q6ZMT9 781 aa6.87□□□□□ -1.31
CLDND1-228ENST00000513873 SSBP4Q9BWG4 385 aaPredicted RBP6.87□□□□□ -1.31
CLDND1-228ENST00000513873 BCO2Q9BYV7 579 aa6.87□□□□□ -1.31
CLDND1-228ENST00000513873 SOX13Q9UN79 622 aa6.87□□□□□ -1.31
CLDND1-228ENST00000513873 ADAMTS12P58397 1594 aa6.86□□□□□ -1.31
CLDND1-228ENST00000513873 CUX1P39880 1505 aa6.86□□□□□ -1.31
CLDND1-228ENST00000513873 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
CLDND1-228ENST00000513873 METTL12A8MUP2 240 aa6.86□□□□□ -1.31
CLDND1-228ENST00000513873 PRPF40AO75400 957 aaKnown RBP6.86□□□□□ -1.31
CLDND1-228ENST00000513873 XRCC5P13010 732 aaKnown RBP6.86□□□□□ -1.31
CLDND1-228ENST00000513873 XPCQ01831 940 aaPredicted RBP6.86□□□□□ -1.31
CLDND1-228ENST00000513873 GRM2Q14416 872 aa6.86□□□□□ -1.31
CLDND1-228ENST00000513873 SETDB1Q15047 1291 aa6.86□□□□□ -1.31
CLDND1-228ENST00000513873 SHISA2Q6UWI4 295 aa6.86□□□□□ -1.31
CLDND1-228ENST00000513873 TCF12Q99081 682 aa6.86□□□□□ -1.31
CLDND1-228ENST00000513873 CARD10Q9BWT7 1032 aa6.86□□□□□ -1.31
CLDND1-228ENST00000513873 SRCIN1Q9C0H9 1055 aa6.86□□□□□ -1.31
CLDND1-228ENST00000513873 MRPL18Q9H0U6 180 aaKnown RBP6.86□□□□□ -1.31
CLDND1-228ENST00000513873 CLEC4MQ9H2X3 399 aaPredicted RBP6.86□□□□□ -1.31
CLDND1-228ENST00000513873 FHAD1B1AJZ9 1412 aa6.85□□□□□ -1.31
CLDND1-228ENST00000513873 DEAF1O75398 565 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms