RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 TNNT1P13805 278 aa13.81□□□□□ -0.2
PRDM16-207ENST00000512462 MRPS27Q92552 414 aaKnown RBP13.81□□□□□ -0.2
PRDM16-207ENST00000512462 APPBP2Q92624 585 aa13.81□□□□□ -0.2
PRDM16-207ENST00000512462 HAUS7Q99871 368 aa13.81□□□□□ -0.2
PRDM16-207ENST00000512462 CHD2O14647 1828 aaKnown RBP13.8□□□□□ -0.2
PRDM16-207ENST00000512462 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 NLRP5P59047 1200 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 SCARF1Q14162 830 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 TSR1Q2NL82 804 aaKnown RBP13.8□□□□□ -0.2
PRDM16-207ENST00000512462 GPIHBP1Q8IV16 184 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 ZSCAN16Q9H4T2 348 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-207ENST00000512462 TPM1P09493 284 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 LRMPQ12912 555 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 CUL4AQ13619 759 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 NECTIN1Q15223 517 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 RTN1Q16799 776 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 MAST3O60307 1309 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 RGS12O14924 1447 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 PRKAB2O43741 272 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 CBX1P83916 185 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 CCDC102BQ68D86 513 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 GTF3C6Q969F1 213 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 NLRP3Q96P20 1036 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 ZSWIM4Q9H7M6 989 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 WDR17Q8IZU2 1322 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 USP54Q70EL1 1684 aa13.8□□□□□ -0.2
PRDM16-207ENST00000512462 RIMBP2O15034 1052 aa13.79□□□□□ -0.2
PRDM16-207ENST00000512462 TPM2P07951 284 aa13.79□□□□□ -0.2
PRDM16-207ENST00000512462 SFPQP23246 707 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRDM16-207ENST00000512462 PICALMQ13492 652 aa13.79□□□□□ -0.2
PRDM16-207ENST00000512462 LMTK3Q96Q04 1460 aa13.79□□□□□ -0.2
PRDM16-207ENST00000512462 AATFQ9NY61 560 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRDM16-207ENST00000512462 UQCRFS1P1P0C7P4 283 aa13.79□□□□□ -0.2
PRDM16-207ENST00000512462 STX1AQ16623 288 aa13.79□□□□□ -0.2
PRDM16-207ENST00000512462 SKIDA1Q1XH10 827 aa13.79□□□□□ -0.2
PRDM16-207ENST00000512462 AK7Q96M32 723 aa13.79□□□□□ -0.2
PRDM16-207ENST00000512462 PDE8AO60658 829 aa13.78□□□□□ -0.2
PRDM16-207ENST00000512462 CTSWP56202 376 aa13.78□□□□□ -0.2
PRDM16-207ENST00000512462 COL9A3Q14050 684 aaPredicted RBP13.78□□□□□ -0.2
PRDM16-207ENST00000512462 KAZALD1Q96I82 304 aa13.78□□□□□ -0.2
PRDM16-207ENST00000512462 CBX8Q9HC52 389 aa13.78□□□□□ -0.2
PRDM16-207ENST00000512462 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
PRDM16-207ENST00000512462 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
PRDM16-207ENST00000512462 SAP30BPQ9UHR5 308 aaKnown RBP13.78□□□□□ -0.2
PRDM16-207ENST00000512462 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
PRDM16-207ENST00000512462 IGSF3O75054 1194 aa13.78□□□□□ -0.2
PRDM16-207ENST00000512462 IFIT1BQ5T764 474 aaKnown RBP13.78□□□□□ -0.2
PRDM16-207ENST00000512462 CATIPQ7Z7H3 387 aa13.78□□□□□ -0.2
PRDM16-207ENST00000512462 NAP1L1P55209 391 aaKnown RBP13.78□□□□□ -0.2
PRDM16-207ENST00000512462 EIF6P56537 245 aaKnown RBP13.78□□□□□ -0.2
PRDM16-207ENST00000512462 RPGRQ92834 1020 aaKnown RBP13.78□□□□□ -0.2
PRDM16-207ENST00000512462 CYP2D7A0A087X1C5 515 aa13.77□□□□□ -0.2
PRDM16-207ENST00000512462 ERCC3P19447 782 aa13.77□□□□□ -0.2
PRDM16-207ENST00000512462 ENOX2Q16206 610 aaKnown RBP13.77□□□□□ -0.2
PRDM16-207ENST00000512462 FAM47AQ5JRC9 791 aa13.77□□□□□ -0.2
PRDM16-207ENST00000512462 ZNF444Q8N0Y2 327 aaPredicted RBP13.77□□□□□ -0.2
PRDM16-207ENST00000512462 ANKRD20A12PQ8NF67 263 aa13.77□□□□□ -0.2
PRDM16-207ENST00000512462 DHX58Q96C10 678 aa13.77□□□□□ -0.2
PRDM16-207ENST00000512462 CABP5Q9NP86 173 aa13.77□□□□□ -0.2
PRDM16-207ENST00000512462 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.2
PRDM16-207ENST00000512462 SPATA31A3Q5VYP0 1347 aa13.77□□□□□ -0.2
PRDM16-207ENST00000512462 MAGEB6P1A0A0J9YX57 407 aa13.77□□□□□ -0.21
PRDM16-207ENST00000512462 MAPK8IP1Q9UQF2 711 aa13.77□□□□□ -0.21
PRDM16-207ENST00000512462 PDE6AP16499 860 aa13.77□□□□□ -0.21
PRDM16-207ENST00000512462 PUM3Q15397 648 aaKnown RBP13.77□□□□□ -0.21
PRDM16-207ENST00000512462 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
PRDM16-207ENST00000512462 HEG1Q9ULI3 1381 aa13.77□□□□□ -0.21
PRDM16-207ENST00000512462 PTPN14Q15678 1187 aa13.76□□□□□ -0.21
PRDM16-207ENST00000512462 ZBTB38Q8NAP3 1195 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-207ENST00000512462 SPATA5Q8NB90 893 aa13.76□□□□□ -0.21
PRDM16-207ENST00000512462 TM6SF1Q9BZW5 370 aa13.76□□□□□ -0.21
PRDM16-207ENST00000512462 CCDC87Q9NVE4 849 aa13.76□□□□□ -0.21
PRDM16-207ENST00000512462 IFNKQ9P0W0 207 aa13.76□□□□□ -0.21
PRDM16-207ENST00000512462 NRBP1Q9UHY1 535 aa13.76□□□□□ -0.21
PRDM16-207ENST00000512462 ANGEL1Q9UNK9 670 aaKnown RBP13.76□□□□□ -0.21
PRDM16-207ENST00000512462 SKILP12757 684 aa13.76□□□□□ -0.21
PRDM16-207ENST00000512462 PDIA6Q15084 440 aa13.76□□□□□ -0.21
PRDM16-207ENST00000512462 KCNQ2O43526 872 aa13.76□□□□□ -0.21
PRDM16-207ENST00000512462 ZNF771Q7L3S4 317 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-207ENST00000512462 CLIC6Q96NY7 704 aa13.76□□□□□ -0.21
PRDM16-207ENST00000512462 NOL7Q9UMY1 257 aaKnown RBP13.76□□□□□ -0.21
PRDM16-207ENST00000512462 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
PRDM16-207ENST00000512462 EEF2KMTQ96G04 330 aa13.75□□□□□ -0.21
PRDM16-207ENST00000512462 PDIA3P30101 505 aaKnown RBP13.75□□□□□ -0.21
PRDM16-207ENST00000512462 TOB2Q14106 344 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-207ENST00000512462 ZNF827Q17R98 1081 aa13.75□□□□□ -0.21
PRDM16-207ENST00000512462 CDK5RAP3Q96JB5 506 aa13.75□□□□□ -0.21
PRDM16-207ENST00000512462 GPR101Q96P66 508 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-207ENST00000512462 RNF41Q9H4P4 317 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-207ENST00000512462 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
PRDM16-207ENST00000512462 COBLO75128 1261 aa13.75□□□□□ -0.21
PRDM16-207ENST00000512462 TXLNAP40222 546 aa13.75□□□□□ -0.21
PRDM16-207ENST00000512462 CRKLP46109 303 aaKnown RBP13.75□□□□□ -0.21
PRDM16-207ENST00000512462 SIK1P57059 783 aa13.75□□□□□ -0.21
PRDM16-207ENST00000512462 NLRP10Q86W26 655 aa13.75□□□□□ -0.21
PRDM16-207ENST00000512462 ESR2Q92731 530 aa13.75□□□□□ -0.21
PRDM16-207ENST00000512462 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRDM16-207ENST00000512462 CARD10Q9BWT7 1032 aa13.75□□□□□ -0.21
PRDM16-207ENST00000512462 V9GY48 417 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-207ENST00000512462 CCDC196A0A1B0GTZ2 297 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms