RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 SSBP05455 408 aaKnown RBP eCLIP12.34□□□□□ -0.43
CPNE4-209ENST00000512055 EIF5P55010 431 aaKnown RBP12.34□□□□□ -0.43
CPNE4-209ENST00000512055 CCDC178Q5BJE1 867 aa12.34□□□□□ -0.43
CPNE4-209ENST00000512055 XAGE2Q96GT9 111 aa12.34□□□□□ -0.43
CPNE4-209ENST00000512055 PTPDC1A2A3K4 754 aa12.34□□□□□ -0.43
CPNE4-209ENST00000512055 ZBTB43O43298 467 aa12.34□□□□□ -0.43
CPNE4-209ENST00000512055 ERBB3P21860 1342 aa12.33□□□□□ -0.43
CPNE4-209ENST00000512055 A0A0D9SFI3 127 aa12.33□□□□□ -0.43
CPNE4-209ENST00000512055 EBAG9O00559 213 aa12.33□□□□□ -0.43
CPNE4-209ENST00000512055 STIM1Q13586 685 aa12.33□□□□□ -0.43
CPNE4-209ENST00000512055 KLHL10Q6JEL2 608 aa12.33□□□□□ -0.43
CPNE4-209ENST00000512055 CCDC121Q6ZUS5 278 aa12.33□□□□□ -0.43
CPNE4-209ENST00000512055 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.43
CPNE4-209ENST00000512055 TMEM132AQ24JP5 1023 aa12.33□□□□□ -0.44
CPNE4-209ENST00000512055 MAGEB6Q8N7X4 407 aa12.33□□□□□ -0.44
CPNE4-209ENST00000512055 CCDC114Q96M63 670 aa12.33□□□□□ -0.44
CPNE4-209ENST00000512055 FEZ1Q99689 392 aa12.33□□□□□ -0.44
CPNE4-209ENST00000512055 ZSWIM4Q9H7M6 989 aa12.33□□□□□ -0.44
CPNE4-209ENST00000512055 ALG1Q9BT22 464 aa12.33□□□□□ -0.44
CPNE4-209ENST00000512055 LUC7L2Q9Y383 392 aaKnown RBP12.33□□□□□ -0.44
CPNE4-209ENST00000512055 RPGRQ92834 1020 aaKnown RBP12.33□□□□□ -0.44
CPNE4-209ENST00000512055 SEC62Q99442 399 aaKnown RBP12.33□□□□□ -0.44
CPNE4-209ENST00000512055 NCOA5Q9HCD5 579 aaKnown RBP12.33□□□□□ -0.44
CPNE4-209ENST00000512055 TLR7Q9NYK1 1049 aaKnown RBP12.33□□□□□ -0.44
CPNE4-209ENST00000512055 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.44
CPNE4-209ENST00000512055 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
CPNE4-209ENST00000512055 ERCC3P19447 782 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 PAFAH1B1P43034 410 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 CATIPQ7Z7H3 387 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 KBTBD3Q8NAB2 608 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 HOMER2Q9NSB8 354 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 CTAGE5O15320 804 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 RFC4P35249 363 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 CFAP58Q5T655 872 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 RBSNQ9H1K0 784 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 ZHX3Q9H4I2 956 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 OSBPL3Q9H4L5 887 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 LMBRD1Q9NUN5 540 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 CLTCQ00610 1675 aaKnown RBP12.32□□□□□ -0.44
CPNE4-209ENST00000512055 PIK3C2BO00750 1634 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 SMTNL1A8MU46 457 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 WTAPQ15007 396 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 ANO6Q4KMQ2 910 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 CNNM3Q8NE01 707 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 SETDB2Q96T68 719 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 ANTXR1Q9H6X2 564 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 MED14O60244 1454 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 C6orf229H3BNL8 230 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 GADD45BO75293 160 aaPredicted RBP12.32□□□□□ -0.44
CPNE4-209ENST00000512055 MARCKSP29966 332 aaPredicted RBP12.32□□□□□ -0.44
CPNE4-209ENST00000512055 MAP2K2P36507 400 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 CEP131Q9UPN4 1083 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 GRIPAP1Q4V328 841 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 JAG2Q9Y219 1238 aa12.32□□□□□ -0.44
CPNE4-209ENST00000512055 TTC36A6NLP5 189 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 UBAP1LF5GYI3 381 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 MCM6Q14566 821 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 ZNF444Q8N0Y2 327 aaPredicted RBP12.31□□□□□ -0.44
CPNE4-209ENST00000512055 RAB3IL1Q8TBN0 382 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 HELLSQ9NRZ9 838 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 NRXN1Q9ULB1 1477 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 GCKP35557 465 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 HOOK3Q86VS8 718 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 ADGRB1O14514 1584 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 ERVV-2B6SEH9 535 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 TAF5LO75529 589 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 ATP5JP18859 108 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 SPA17Q15506 151 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 NLRP3Q96P20 1036 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 DNAJC25Q9H1X3 360 aa12.31□□□□□ -0.44
CPNE4-209ENST00000512055 PCK1P35558 622 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 SETDB1Q15047 1291 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 STX1AQ16623 288 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 FSD2A1L4K1 749 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 NLRP5P59047 1200 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 LRRC24Q50LG9 513 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 ZNF219Q9P2Y4 722 aaPredicted RBP12.3□□□□□ -0.44
CPNE4-209ENST00000512055 USO1O60763 962 aaKnown RBP12.3□□□□□ -0.44
CPNE4-209ENST00000512055 ME3Q16798 604 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 LRRC43Q8N309 656 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 ZKSCAN3Q9BRR0 538 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 STIM2Q9P246 746 aa12.3□□□□□ -0.44
CPNE4-209ENST00000512055 JAK2O60674 1132 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 ZAP70P43403 619 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 UVSSAQ2YD98 709 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 NAA16Q6N069 864 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-209ENST00000512055 ZBTB9Q96C00 473 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 PRIMPOLQ96LW4 560 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 BRD1O95696 1058 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 FERP16591 822 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 TPD52P55327 224 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-209ENST00000512055 PPFIBP2Q8ND30 876 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 CTNNBL1Q8WYA6 563 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms