RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 FIBPO43427 364 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 RPN1P04843 607 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 HCLS1P14317 486 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 SEC13P55735 322 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 NFX1Q12986 1120 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 TAF11Q15544 211 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 PLEKHG4Q58EX7 1191 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 C16orf87Q6PH81 154 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 ANKRD24Q8TF21 1146 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 C22orf23Q9BZE7 217 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 C12orf49Q9H741 205 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 RNF19AQ9NV58 838 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 ACAD8Q9UKU7 415 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 TRPC5Q9UL62 973 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 PCDHGB7Q9Y5F8 929 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 USP31Q70CQ4 1352 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 CAMTA1Q9Y6Y1 1673 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 FCHSD2O94868 740 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 HOXC9P31274 260 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 CDKN1CP49918 316 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 ELOAQ14241 798 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 SPECC1Q5M775 1068 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 ACBD5Q5T8D3 534 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 PPP2R2DQ66LE6 453 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 ZCCHC8Q6NZY4 707 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 PODNQ7Z5L7 613 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 RELTQ969Z4 430 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 GJD4Q96KN9 370 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 PHOX2BQ99453 314 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 KANSL2Q9H9L4 492 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 MRS2Q9HD23 443 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 RBM28Q9NW13 759 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 FANCLQ9NW38 375 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 POLKQ9UBT6 870 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 PARP2Q9UGN5 583 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 MARF1Q9Y4F3 1742 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 CRYBG1Q9Y4K1 1723 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 KIF20BQ96Q89 1820 aa5.97□□□□□ -1.45
TRAPPC11-208ENST00000511955 SLIT3O75094 1523 aa5.96□□□□□ -1.45
TRAPPC11-208ENST00000511955 NFAT5O94916 1531 aa5.96□□□□□ -1.45
TRAPPC11-208ENST00000511955 A6NJY4 79 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 MAP3K13O43283 966 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 LZTS3O60299 673 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 P4HBP07237 508 aaKnown RBP5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 RASA1P20936 1047 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 ZNF76P36508 570 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 PIK3CAP42336 1068 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 CASP2P42575 452 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 KIAA2012Q0VF49 1180 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 COL19A1Q14993 1142 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 BRDTQ58F21 947 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 IFNL1Q8IU54 200 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 ITFG2Q969R8 447 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 RABL2BQ9UNT1 228 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 NDUFB9Q9Y6M9 179 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 PLCH1Q4KWH8 1693 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 SLIT2O94813 1529 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 CPDO75976 1380 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 SPDYE16A6NNV3 312 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 CDC45O75419 566 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 CD44P16070 742 aaKnown RBP5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 ATP2B4P23634 1241 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 MTHFSP49914 203 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 NFE2Q16621 373 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 ZNF394Q53GI3 561 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 JAMLQ86YT9 394 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 NLRP7Q8WX94 980 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 TMEM87BQ96K49 555 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 SRPK1Q96SB4 655 aaKnown RBP5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 SUDS3Q9H7L9 328 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 DAAM1Q9Y4D1 1078 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 PPP2R3BQ9Y5P8 575 aa5.96□□□□□ -1.46
TRAPPC11-208ENST00000511955 AATKQ6ZMQ8 1374 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 hCG_1984214I3L0E3 225 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 GPR37L1O60883 481 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 SCGB1D2O95969 90 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 RBM6P78332 1123 aaKnown RBP5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 IFT88Q13099 833 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 SNX32Q86XE0 403 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 GLYCTKQ8IVS8 523 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 IFNL3Q8IZI9 196 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 FBXO22Q8NEZ5 403 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 IP6K1Q92551 441 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 NELL1Q92832 810 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 GPR101Q96P66 508 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 FAM126AQ9BYI3 521 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 YY1AP1Q9H869 796 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 FBXO2Q9UK22 296 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 COL5A2P05997 1499 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 LTN1O94822 1766 aa5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 COL14A1Q05707 1796 aaKnown RBP5.95□□□□□ -1.46
TRAPPC11-208ENST00000511955 MPHOSPH10O00566 681 aaKnown RBP5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 MAP3K7O43318 606 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 ALDH1L1O75891 902 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 TPM2P07951 284 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 USP17L8P0C7I0 530 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 EIF5P55010 431 aaKnown RBP5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 EXOSC10Q01780 885 aaKnown RBP5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 ANO1Q5XXA6 986 aa5.94□□□□□ -1.46
TRAPPC11-208ENST00000511955 ERAP2Q6P179 960 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms