RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 MED23Q9ULK4 1368 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 ABCA3Q99758 1704 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 PTPRCP08575 1304 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 ASNSP08243 561 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 PPIL2Q13356 520 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 CFAP100Q494V2 611 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 FAM83AQ86UY5 434 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 RETREG2Q8NC44 543 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 CRNKL1Q9BZJ0 848 aaKnown RBP3.44□□□□□ -1.86
CLOCK-209ENST00000511124 RNF208Q9H0X6 261 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 RNF186Q9NXI6 227 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 FBXO40Q9UH90 709 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 PAPPAQ13219 1627 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 PPATQ06203 517 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 PUM3Q15397 648 aaKnown RBP3.44□□□□□ -1.86
CLOCK-209ENST00000511124 NBPF9Q3BBW0 867 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 CRY2Q49AN0 593 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 SUSD4Q5VX71 490 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 NOL8Q76FK4 1167 aaKnown RBP3.44□□□□□ -1.86
CLOCK-209ENST00000511124 DPP9Q86TI2 863 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 SAPCD2Q86UD0 394 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 KIAA0825Q8IV33 1275 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 FOXP4Q8IVH2 680 aaPredicted RBP3.44□□□□□ -1.86
CLOCK-209ENST00000511124 IL17REQ8NFR9 667 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 MRIQ9BWK5 157 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 AP5M1Q9H0R1 490 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 ABCC4O15439 1325 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 NUP188Q5SRE5 1749 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 ATP5J2-PTCD1G3V325 749 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 UBE2Q2LH0YL09 131 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 ENTPD3O75355 529 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 RPLP2P05387 115 aaKnown RBP3.44□□□□□ -1.86
CLOCK-209ENST00000511124 GRK4P32298 578 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 PRKG1Q13976 671 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 ZNF697Q5TEC3 545 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 WWC2Q6AWC2 1192 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 UBE3BQ7Z3V4 1068 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 MB21D1Q8N884 522 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 TBC1D16Q8TBP0 767 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 WNK4Q96J92 1243 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 NEUROD6Q96NK8 337 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 MAP3K2Q9Y2U5 619 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 MROH7Q68CQ1 1323 aa3.44□□□□□ -1.86
CLOCK-209ENST00000511124 BTAF1O14981 1849 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 FSD2A1L4K1 749 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 KLRG2A4D1S0 409 aaPredicted RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 ZBED4O75132 1171 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 BCAMP50895 628 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 GCKRQ14397 625 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 SPRYD7Q5W111 196 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 CCDC129Q6ZRS4 1044 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 LPIN2Q92539 896 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 CCDC17Q96LX7 622 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 CARD14Q9BXL6 1004 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 ABCF2Q9UG63 623 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 MYPNQ86TC9 1320 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 C4BP0C0L5 1744 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 IFIT2P09913 472 aaKnown RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 ITGA6P23229 1130 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 SOX10P56693 466 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 DDX10Q13206 875 aaKnown RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 KCTD2Q14681 263 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 RAB30Q15771 203 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 ATP2B3Q16720 1220 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 RNF180Q86T96 592 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 RPUSD2Q8IZ73 545 aaKnown RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 DDX11Q96FC9 970 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 UPF3BQ9BZI7 483 aaKnown RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 LRRCC1Q9C099 1032 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 PDGFDQ9GZP0 370 aaPredicted RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 DEFB129Q9H1M3 183 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 HOXC10Q9NYD6 342 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 HERC5Q9UII4 1024 aaKnown RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 SLC45A1Q9Y2W3 748 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 C4AP0C0L4 1744 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 CEMIPQ8WUJ3 1361 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L5A8MUK1 530 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 F8W031 263 aaPredicted RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 ERC2O15083 957 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 PARNO95453 639 aaKnown RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 GJB1P08034 283 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 CNGA1P29973 690 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 TM4SF4P48230 202 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 ZNF280AP59817 542 aaPredicted RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 RTL5Q5HYW3 569 aaPredicted RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 USP17L2Q6R6M4 530 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 CASC1Q6TDU7 716 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 HHIPL2Q6UWX4 724 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 CLASRPQ8N2M8 674 aaKnown RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 CCDC24Q8N4L8 307 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 FAM89AQ96GI7 184 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 WRNIP1Q96S55 665 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 UBE2OQ9C0C9 1292 aaKnown RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 OSBPL5Q9H0X9 879 aaPredicted RBP3.43□□□□□ -1.86
CLOCK-209ENST00000511124 CHPF2Q9P2E5 772 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 HPS5Q9UPZ3 1129 aa3.43□□□□□ -1.86
CLOCK-209ENST00000511124 TNRC6CQ9HCJ0 1690 aaKnown RBP3.42□□□□□ -1.86
CLOCK-209ENST00000511124 GRM8O00222 908 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 NTSR2O95665 410 aa3.42□□□□□ -1.86
CLOCK-209ENST00000511124 SKIV2LQ15477 1246 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms