RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 RBM17Q96I25 401 aaKnown RBP9.26□□□□□ -0.93
SSBP2-213ENST00000509743 ARMT1Q9H993 441 aa9.26□□□□□ -0.93
SSBP2-213ENST00000509743 RAI14Q9P0K7 980 aa9.26□□□□□ -0.93
SSBP2-213ENST00000509743 A0A0G2JLW4 131 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 MAGEB6P1A0A0J9YX57 407 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 FSD2A1L4K1 749 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 GSG1L2A8MUP6 293 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 PDIA3P30101 505 aaKnown RBP9.25□□□□□ -0.93
SSBP2-213ENST00000509743 APOBRQ0VD83 1088 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 NAA16Q6N069 864 aaPredicted RBP9.25□□□□□ -0.93
SSBP2-213ENST00000509743 ZNF804AQ7Z570 1209 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 POTEDQ86YR6 584 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 TBC1D10CQ8IV04 446 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 IFNL3Q8IZI9 196 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 NLGN1Q8N2Q7 840 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 FAM184AQ8NB25 1140 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 SYAP1Q96A49 352 aaPredicted RBP9.25□□□□□ -0.93
SSBP2-213ENST00000509743 TMEM87BQ96K49 555 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 CRAMP1Q96RY5 1269 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 MTA3Q9BTC8 594 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 KRT23Q9C075 422 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 RNF41Q9H4P4 317 aaPredicted RBP9.25□□□□□ -0.93
SSBP2-213ENST00000509743 ABCF2Q9UG63 623 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 SLC4A4Q9Y6R1 1079 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 COL1A1P02452 1464 aaPredicted RBP9.25□□□□□ -0.93
SSBP2-213ENST00000509743 COL4A1P02462 1669 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 SALL1Q9NSC2 1324 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 IRS2Q9Y4H2 1338 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 C4AP0C0L4 1744 aa9.25□□□□□ -0.93
SSBP2-213ENST00000509743 PTPDC1A2A3K4 754 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 KLRG2A4D1S0 409 aaPredicted RBP9.24□□□□□ -0.93
SSBP2-213ENST00000509743 POLRMTO00411 1230 aaKnown RBP9.24□□□□□ -0.93
SSBP2-213ENST00000509743 BBOX1O75936 387 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 RXRBP28702 533 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 HOXA10P31260 410 aaPredicted RBP9.24□□□□□ -0.93
SSBP2-213ENST00000509743 TDO2P48775 406 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 MRE11P49959 708 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 ANTXR2P58335 489 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 SCRN1Q12765 414 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 GIMAP6Q6P9H5 292 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 KLHL34Q8N239 644 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 PROM2Q8N271 834 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 LCORLQ8N3X6 602 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 CCDC24Q8N4L8 307 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 RGS22Q8NE09 1264 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 NSUN7Q8NE18 718 aaKnown RBP9.24□□□□□ -0.93
SSBP2-213ENST00000509743 WDR66Q8TBY9 1149 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 BRIP1Q9BX63 1249 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 LRRC2Q9BYS8 371 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 NBPF3Q9H094 633 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 EPB41L4AQ9HCS5 686 aaPredicted RBP9.24□□□□□ -0.93
SSBP2-213ENST00000509743 TFCP2L1Q9NZI6 479 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 ANKIB1Q9P2G1 1089 aa9.24□□□□□ -0.93
SSBP2-213ENST00000509743 ANGEL1Q9UNK9 670 aaKnown RBP9.24□□□□□ -0.93
SSBP2-213ENST00000509743 IQSEC3Q9UPP2 1182 aaPredicted RBP9.24□□□□□ -0.93
SSBP2-213ENST00000509743 KLF18A0A0U1RQI7 1052 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 GOLGA8BA8MQT2 603 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 H3BQV1 296 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 APBA3O96018 575 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 PCP11498 1178 aaKnown RBP9.23□□□□□ -0.93
SSBP2-213ENST00000509743 ATP2B4P23634 1241 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 ZNF445P59923 1031 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 KRT85P78386 507 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 DDR1Q08345 913 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 SART3Q15020 963 aaKnown RBP9.23□□□□□ -0.93
SSBP2-213ENST00000509743 AKNAD1Q5T1N1 836 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 IFFO2Q5TF58 517 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 MFSD6Q6ZSS7 791 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 CERS3Q8IU89 383 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 MIGA1Q8NAN2 632 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 STAG1Q8WVM7 1258 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 AKT1S1Q96B36 256 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 RIOK1Q9BRS2 568 aaKnown RBP9.23□□□□□ -0.93
SSBP2-213ENST00000509743 ZSCAN16Q9H4T2 348 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-213ENST00000509743 ANAPC4Q9UJX5 808 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 NAP1L2Q9ULW6 460 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-213ENST00000509743 SBF2Q86WG5 1849 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 TAF1LQ8IZX4 1826 aa9.23□□□□□ -0.93
SSBP2-213ENST00000509743 TNRC6CQ9HCJ0 1690 aaKnown RBP9.23□□□□□ -0.93
SSBP2-213ENST00000509743 TIAM2Q8IVF5 1701 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 DUOX1Q9NRD9 1551 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 SH2B2O14492 632 aaPredicted RBP9.22□□□□□ -0.93
SSBP2-213ENST00000509743 JAK2O60674 1132 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 CDKL5O76039 1030 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 KLRK1P26718 216 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 NT5C2P49902 561 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 RCAN1P53805 252 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 UBE2HP62256 183 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 GSTO1P78417 241 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 PPARAQ07869 468 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 ZNF827Q17R98 1081 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 ZSCAN23Q3MJ62 389 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 CAVIN1Q6NZI2 390 aaKnown RBP9.22□□□□□ -0.93
SSBP2-213ENST00000509743 CPLX2Q6PUV4 134 aaKnown RBP9.22□□□□□ -0.93
SSBP2-213ENST00000509743 CDC37L1Q7L3B6 337 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 USP48Q86UV5 1035 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 SGMS1Q86VZ5 419 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 TDRD7Q8NHU6 1098 aaKnown RBP9.22□□□□□ -0.93
SSBP2-213ENST00000509743 GPT2Q8TD30 523 aa9.22□□□□□ -0.93
SSBP2-213ENST00000509743 NSUN4Q96CB9 384 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms